Chain sequence(s) |
A: MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.4263 | |
2 | S | A | 1.4384 | |
3 | F | A | 2.5361 | |
4 | T | A | 1.8328 | |
5 | I | A | 2.1480 | |
6 | P | A | 0.7120 | |
7 | T | A | 0.2340 | |
8 | N | A | -0.2723 | |
9 | L | A | 1.0320 | |
10 | Y | A | 1.0146 | |
11 | K | A | -0.5154 | |
12 | P | A | 0.1823 | |
13 | L | A | 0.9550 | |
14 | A | A | 0.0816 | |
15 | T | A | -0.7275 | |
16 | K | A | -2.2050 | |
17 | P | A | -1.9780 | |
18 | K | A | -2.3550 | |
19 | H | A | -1.4090 | |
20 | L | A | 0.4274 | |
21 | S | A | -0.0201 | |
22 | S | A | -0.0567 | |
23 | S | A | 0.1703 | |
24 | S | A | 0.5894 | |
25 | F | A | 1.4895 | |
26 | A | A | 0.2754 | |
27 | P | A | -0.9602 | |
28 | R | A | -2.0202 | |
29 | S | A | -1.2548 | |
30 | K | A | -0.7152 | |
31 | I | A | 1.8059 | |
32 | V | A | 2.0758 | |
33 | C | A | 0.7820 | |
34 | Q | A | -1.3289 | |
35 | Q | A | -2.7776 | |
36 | E | A | -3.8912 | |
37 | N | A | -3.9341 | |
38 | D | A | -4.1138 | |
39 | Q | A | -3.5288 | |
40 | Q | A | -3.3284 | |
41 | Q | A | -2.9501 | |
42 | P | A | -2.3404 | |
43 | K | A | -2.8872 | |
44 | K | A | -2.2808 | |
45 | L | A | -0.2663 | |
46 | E | A | -1.1797 | |
47 | L | A | 0.6791 | |
48 | A | A | 0.0534 | |
49 | K | A | -0.7496 | |
50 | V | A | 0.8040 | |
51 | G | A | -0.3110 | |
52 | A | A | -0.5551 | |
53 | N | A | -1.0670 | |
54 | A | A | -0.1444 | |
55 | A | A | 0.1270 | |
56 | A | A | 0.5293 | |
57 | A | A | 1.1450 | |
58 | L | A | 2.0008 | |
59 | A | A | 1.6969 | |
60 | L | A | 2.4990 | |
61 | S | A | 1.9844 | |
62 | S | A | 2.0413 | |
63 | V | A | 3.0681 | |
64 | L | A | 3.3162 | |
65 | L | A | 2.8071 | |
66 | S | A | 1.7594 | |
67 | S | A | 1.6505 | |
68 | W | A | 2.0452 | |
69 | S | A | 1.3037 | |
70 | V | A | 1.6369 | |
71 | A | A | 0.4893 | |
72 | P | A | -0.5625 | |
73 | D | A | -1.4512 | |
74 | A | A | -0.5413 | |
75 | A | A | -0.2628 | |
76 | M | A | 0.4084 | |
77 | A | A | -0.1807 | |
78 | D | A | -1.3546 | |
79 | I | A | -0.4053 | |
80 | A | A | -0.4138 | |
81 | G | A | -0.9674 | |
82 | L | A | -0.5560 | |
83 | T | A | -1.2415 | |
84 | P | A | -1.3848 | |
85 | C | A | 0.0000 | |
86 | K | A | -3.2764 | |
87 | E | A | -3.2113 | |
88 | S | A | -2.8501 | |
89 | K | A | -3.6340 | |
90 | Q | A | -3.3638 | |
91 | F | A | 0.0000 | |
92 | A | A | -3.2643 | |
93 | K | A | -3.9752 | |
94 | R | A | -3.6967 | |
95 | E | A | -3.6599 | |
96 | K | A | -4.2563 | |
97 | Q | A | -4.0700 | |
98 | A | A | -3.0109 | |
99 | L | A | -3.2719 | |
100 | K | A | -3.8145 | |
101 | K | A | -3.2659 | |
102 | L | A | -2.1457 | |
103 | Q | A | -2.4901 | |
104 | A | A | -1.6012 | |
105 | S | A | -0.7914 | |
106 | L | A | -0.8195 | |
107 | K | A | -1.0945 | |
108 | L | A | 0.8758 | |
109 | Y | A | 0.6722 | |
110 | A | A | -0.7180 | |
111 | D | A | -2.2328 | |
112 | D | A | -2.2078 | |
113 | S | A | -0.8610 | |
114 | A | A | -0.0049 | |
115 | P | A | 0.2841 | |
116 | A | A | 0.0000 | |
117 | L | A | 0.8239 | |
118 | A | A | 0.5205 | |
119 | I | A | -0.0132 | |
120 | K | A | -0.9639 | |
121 | A | A | -1.0085 | |
122 | T | A | -1.3435 | |
123 | M | A | -2.4538 | |
124 | E | A | -3.8010 | |
125 | K | A | -4.1395 | |
126 | T | A | 0.0000 | |
127 | K | A | -4.3539 | |
128 | K | A | -4.6549 | |
129 | R | A | -4.0072 | |
130 | F | A | -3.1075 | |
131 | D | A | -3.7586 | |
132 | N | A | -2.5202 | |
133 | Y | A | -1.2283 | |
134 | G | A | -2.3125 | |
135 | K | A | -2.0341 | |
136 | Y | A | -0.2685 | |
137 | G | A | -0.7583 | |
138 | L | A | -0.0291 | |
139 | L | A | 0.0000 | |
140 | C | A | 0.0000 | |
141 | G | A | -0.7973 | |
142 | S | A | -1.3548 | |
143 | D | A | -2.1803 | |
144 | G | A | 0.0000 | |
145 | L | A | 0.1468 | |
146 | P | A | 0.4040 | |
147 | H | A | 0.4982 | |
148 | L | A | 2.1943 | |
149 | I | A | 1.7019 | |
150 | V | A | 2.4887 | |
151 | S | A | 0.8406 | |
152 | G | A | -0.1653 | |
153 | D | A | -1.2223 | |
154 | Q | A | -2.2588 | |
155 | R | A | -2.4345 | |
156 | H | A | 0.0000 | |
157 | W | A | 0.2195 | |
158 | G | A | 0.2105 | |
159 | E | A | 1.1445 | |
160 | F | A | 2.7973 | |
161 | I | A | 2.2167 | |
162 | T | A | 1.8150 | |
163 | P | A | 2.2876 | |
164 | G | A | 3.2043 | |
165 | I | A | 4.4675 | |
166 | L | A | 4.5232 | |
167 | F | A | 4.6526 | |
168 | L | A | 4.4480 | |
169 | Y | A | 3.9747 | |
170 | I | A | 4.1841 | |
171 | A | A | 2.9482 | |
172 | G | A | 2.2936 | |
173 | W | A | 2.7868 | |
174 | I | A | 2.8720 | |
175 | G | A | 0.7096 | |
176 | W | A | 0.9408 | |
177 | V | A | 1.5114 | |
178 | G | A | 0.7875 | |
179 | R | A | 0.4521 | |
180 | S | A | 0.5136 | |
181 | Y | A | 0.0000 | |
182 | L | A | 0.9042 | |
183 | I | A | 0.6940 | |
184 | A | A | -0.0673 | |
185 | I | A | 0.0000 | |
186 | R | A | -2.8380 | |
187 | D | A | -3.4820 | |
188 | E | A | -3.9668 | |
189 | K | A | -3.9445 | |
190 | K | A | -4.0977 | |
191 | P | A | -2.6691 | |
192 | T | A | -1.5395 | |
193 | Q | A | -1.3772 | |
194 | K | A | -0.4708 | |
195 | E | A | -0.1151 | |
196 | I | A | 2.0881 | |
197 | I | A | 2.8814 | |
198 | I | A | 2.5247 | |
199 | D | A | 1.4628 | |
200 | V | A | 2.2607 | |
201 | P | A | 0.9614 | |
202 | L | A | 1.0966 | |
203 | A | A | 1.4778 | |
204 | S | A | 1.0930 | |
205 | S | A | 0.8446 | |
206 | L | A | 1.1081 | |
207 | L | A | 2.4193 | |
208 | F | A | 2.2623 | |
209 | R | A | 0.1780 | |
210 | G | A | 0.0000 | |
211 | F | A | 2.8964 | |
212 | S | A | 1.2503 | |
213 | W | A | 1.5834 | |
214 | P | A | 1.4375 | |
215 | V | A | 2.0203 | |
216 | A | A | 0.7920 | |
217 | A | A | 0.7838 | |
218 | Y | A | 1.6705 | |
219 | R | A | -0.5364 | |
220 | E | A | -0.2783 | |
221 | L | A | 1.4303 | |
222 | L | A | 0.8019 | |
223 | N | A | -1.0013 | |
224 | G | A | -1.1280 | |
225 | E | A | -1.9663 | |
226 | L | A | -0.0122 | |
227 | V | A | 0.2639 | |
228 | D | A | -1.8709 | |
229 | N | A | -1.9737 | |
230 | N | A | -1.2611 | |
231 | F | A | 0.8072 |