Chain sequence(s) |
A: MKKLTIILHRNGETYTFETELDERSRTESPDGRITLEVFLHEGTLSVLLRNAVQADEGEYEVIVDGLTNRNEGKVKDGVIELTLSKEVLESILKNPETTIEIRQK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | KN105A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.876883 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimization (00:00:01) [INFO] FoldX: Building mutant model (00:00:36) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:48) [INFO] Main: Simulation completed successfully. (00:00:48) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | -0.2224 | |
2 | K | A | -1.7833 | |
3 | K | A | -2.8737 | |
4 | L | A | 0.0000 | |
5 | T | A | -1.5046 | |
6 | I | A | 0.0000 | |
7 | I | A | -0.3786 | |
8 | L | A | 0.0000 | |
9 | H | A | -1.8629 | |
10 | R | A | 0.0000 | |
11 | N | A | -2.2244 | |
12 | G | A | -1.7946 | |
13 | E | A | -1.6391 | |
14 | T | A | -1.0200 | |
15 | Y | A | 0.0000 | |
16 | T | A | -0.6604 | |
17 | F | A | 0.0000 | |
18 | E | A | -2.6663 | |
19 | T | A | -2.6116 | |
20 | E | A | -3.3156 | |
21 | L | A | -2.1703 | |
22 | D | A | -3.6055 | |
23 | E | A | -3.7044 | |
24 | R | A | -3.5072 | |
25 | S | A | -2.6833 | |
26 | R | A | -3.0596 | |
27 | T | A | -2.3796 | |
28 | E | A | -3.2325 | |
29 | S | A | 0.0000 | |
30 | P | A | -1.9345 | |
31 | D | A | -2.8201 | |
32 | G | A | -2.6456 | |
33 | R | A | -2.7368 | |
34 | I | A | 0.0000 | |
35 | T | A | -2.0217 | |
36 | L | A | 0.0000 | |
37 | E | A | 0.0000 | |
38 | V | A | 0.0000 | |
39 | F | A | -1.2010 | |
40 | L | A | -1.7634 | |
41 | H | A | -2.4668 | |
42 | E | A | -2.5264 | |
43 | G | A | -1.8349 | |
44 | T | A | -1.2199 | |
45 | L | A | 0.0000 | |
46 | S | A | 0.0000 | |
47 | V | A | 0.0000 | |
48 | L | A | -0.5119 | |
49 | L | A | 0.0000 | |
50 | R | A | -1.7495 | |
51 | N | A | -1.6915 | |
52 | A | A | 0.0000 | |
53 | V | A | -0.0922 | |
54 | Q | A | -1.1532 | |
55 | A | A | -0.5661 | |
56 | D | A | 0.0000 | |
57 | E | A | -2.5186 | |
58 | G | A | -2.4460 | |
59 | E | A | -3.4076 | |
60 | Y | A | 0.0000 | |
61 | E | A | -2.7900 | |
62 | V | A | 0.0000 | |
63 | I | A | -0.7827 | |
64 | V | A | 0.0000 | |
65 | D | A | -1.8710 | |
66 | G | A | -0.9342 | |
67 | L | A | -0.4071 | |
68 | T | A | -0.8840 | |
69 | N | A | -1.4678 | |
70 | R | A | -3.0958 | |
71 | N | A | -2.7519 | |
72 | E | A | -3.4911 | |
73 | G | A | 0.0000 | |
74 | K | A | -3.2330 | |
75 | V | A | -2.3384 | |
76 | K | A | -2.5221 | |
77 | D | A | -2.5092 | |
78 | G | A | -1.7447 | |
79 | V | A | -1.4587 | |
80 | I | A | 0.0000 | |
81 | E | A | -1.5175 | |
82 | L | A | 0.0000 | |
83 | T | A | -0.8920 | |
84 | L | A | 0.0000 | |
85 | S | A | -1.9664 | |
86 | K | A | -3.1282 | |
87 | E | A | -3.0934 | |
88 | V | A | 0.0000 | |
89 | L | A | 0.0000 | |
90 | E | A | -3.0131 | |
91 | S | A | -2.2677 | |
92 | I | A | 0.0000 | |
93 | L | A | -1.2260 | |
94 | K | A | -2.3017 | |
95 | N | A | -2.3986 | |
96 | P | A | -1.9013 | |
97 | E | A | -2.7650 | |
98 | T | A | 0.0000 | |
99 | T | A | -1.1915 | |
100 | I | A | 0.0000 | |
101 | E | A | -1.1736 | |
102 | I | A | 0.0000 | |
103 | R | A | -3.0824 | |
104 | Q | A | -3.0196 | |
105 | N | A | -2.7806 | mutated: KN105A |