Project name: 58b9f65794bcc5f [mutate: VR26A, LK105A] [mutate: KN105A]

Status: done

Started: 2025-03-11 23:08:41
Chain sequence(s) A: MKKLTIILHRNGETYTFETELDERSRTESPDGRITLEVFLHEGTLSVLLRNAVQADEGEYEVIVDGLTNRNEGKVKDGVIELTLSKEVLESILKNPETTIEIRQK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Mutated residues KN105A
Energy difference between WT (input) and mutated protein (by FoldX) 0.876883 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:00:36)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:00:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:48)
Show buried residues

Minimal score value
-3.7044
Maximal score value
0.0
Average score
-1.4877
Total score value
-156.2079

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A -0.2224
2 K A -1.7833
3 K A -2.8737
4 L A 0.0000
5 T A -1.5046
6 I A 0.0000
7 I A -0.3786
8 L A 0.0000
9 H A -1.8629
10 R A 0.0000
11 N A -2.2244
12 G A -1.7946
13 E A -1.6391
14 T A -1.0200
15 Y A 0.0000
16 T A -0.6604
17 F A 0.0000
18 E A -2.6663
19 T A -2.6116
20 E A -3.3156
21 L A -2.1703
22 D A -3.6055
23 E A -3.7044
24 R A -3.5072
25 S A -2.6833
26 R A -3.0596
27 T A -2.3796
28 E A -3.2325
29 S A 0.0000
30 P A -1.9345
31 D A -2.8201
32 G A -2.6456
33 R A -2.7368
34 I A 0.0000
35 T A -2.0217
36 L A 0.0000
37 E A 0.0000
38 V A 0.0000
39 F A -1.2010
40 L A -1.7634
41 H A -2.4668
42 E A -2.5264
43 G A -1.8349
44 T A -1.2199
45 L A 0.0000
46 S A 0.0000
47 V A 0.0000
48 L A -0.5119
49 L A 0.0000
50 R A -1.7495
51 N A -1.6915
52 A A 0.0000
53 V A -0.0922
54 Q A -1.1532
55 A A -0.5661
56 D A 0.0000
57 E A -2.5186
58 G A -2.4460
59 E A -3.4076
60 Y A 0.0000
61 E A -2.7900
62 V A 0.0000
63 I A -0.7827
64 V A 0.0000
65 D A -1.8710
66 G A -0.9342
67 L A -0.4071
68 T A -0.8840
69 N A -1.4678
70 R A -3.0958
71 N A -2.7519
72 E A -3.4911
73 G A 0.0000
74 K A -3.2330
75 V A -2.3384
76 K A -2.5221
77 D A -2.5092
78 G A -1.7447
79 V A -1.4587
80 I A 0.0000
81 E A -1.5175
82 L A 0.0000
83 T A -0.8920
84 L A 0.0000
85 S A -1.9664
86 K A -3.1282
87 E A -3.0934
88 V A 0.0000
89 L A 0.0000
90 E A -3.0131
91 S A -2.2677
92 I A 0.0000
93 L A -1.2260
94 K A -2.3017
95 N A -2.3986
96 P A -1.9013
97 E A -2.7650
98 T A 0.0000
99 T A -1.1915
100 I A 0.0000
101 E A -1.1736
102 I A 0.0000
103 R A -3.0824
104 Q A -3.0196
105 N A -2.7806 mutated: KN105A
Download PDB file
View in 3Dmol