Chain sequence(s) |
A: QVQLVESGGGLVKPGGSLRLSCAASGFTFTDYYMSWIRQAPGKGLEWVSYITDDGSTTYYADSVKGRFTISRDNAQNSLYLQMNSLRAEETAVYYCARMRGGLVASAKSPRSSAPHDYYFGMDVWGQGTTVTVSS
B: SYELTQPPSVSVSPGQTARITCSGDALPNQYAYWYQQRSGQAPVLVISKDTERPSGIPERFSGSSSGATVTLTISGVQAEDEADYYCQSADNSATFWVFGGGTRLTVL input PDB |
Selected Chain(s) | A,B |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimization (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:01:35) [INFO] Main: Simulation completed successfully. (00:01:36) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | Q | A | -1.0394 | |
2 | V | A | -0.0395 | |
3 | Q | A | -0.5171 | |
4 | L | A | 0.0000 | |
5 | V | A | 0.8484 | |
6 | E | A | 0.0000 | |
7 | S | A | -0.4435 | |
8 | G | A | -0.9837 | |
9 | G | A | -0.3903 | |
10 | G | A | 0.4349 | |
11 | L | A | 1.0747 | |
12 | V | A | -0.2691 | |
13 | K | A | -1.8132 | |
14 | P | A | -1.8357 | |
15 | G | A | -1.5940 | |
16 | G | A | -1.1506 | |
17 | S | A | -1.4574 | |
18 | L | A | -1.0382 | |
19 | R | A | -2.2875 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.4566 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.0313 | |
24 | A | A | 0.0000 | |
25 | S | A | -0.4331 | |
26 | G | A | -0.5886 | |
27 | F | A | -0.1983 | |
28 | T | A | -0.2633 | |
29 | F | A | 0.0000 | |
30 | T | A | -1.2220 | |
31 | D | A | -1.0453 | |
32 | Y | A | -0.6904 | |
33 | Y | A | -0.5046 | |
34 | M | A | 0.0000 | |
35 | S | A | 0.0000 | |
36 | W | A | 0.0000 | |
37 | I | A | 0.0000 | |
38 | R | A | 0.0000 | |
39 | Q | A | -0.8368 | |
40 | A | A | -1.2355 | |
41 | P | A | -0.9955 | |
42 | G | A | -1.4691 | |
43 | K | A | -2.2852 | |
44 | G | A | -1.5703 | |
45 | L | A | 0.0000 | |
46 | E | A | -1.0647 | |
47 | W | A | 0.0000 | |
48 | V | A | 0.0000 | |
49 | S | A | 0.0000 | |
50 | Y | A | 0.0000 | |
51 | I | A | 0.0000 | |
52 | T | A | -0.9392 | |
53 | D | A | -1.6821 | |
54 | D | A | -2.4082 | |
55 | G | A | -1.5067 | |
56 | S | A | -1.0076 | |
57 | T | A | -0.4946 | |
58 | T | A | 0.1394 | |
59 | Y | A | 0.1525 | |
60 | Y | A | -0.5775 | |
61 | A | A | -1.1482 | |
62 | D | A | -2.3864 | |
63 | S | A | -1.6077 | |
64 | V | A | 0.0000 | |
65 | K | A | -2.5336 | |
66 | G | A | -1.7948 | |
67 | R | A | -1.4862 | |
68 | F | A | 0.0000 | |
69 | T | A | -0.9721 | |
70 | I | A | 0.0000 | |
71 | S | A | -0.5041 | |
72 | R | A | -1.2665 | |
73 | D | A | -1.5977 | |
74 | N | A | -1.7482 | |
75 | A | A | -1.1029 | |
76 | Q | A | -1.7988 | |
77 | N | A | -1.5332 | |
78 | S | A | 0.0000 | |
79 | L | A | 0.0000 | |
80 | Y | A | -0.6633 | |
81 | L | A | 0.0000 | |
82 | Q | A | -1.6786 | |
83 | M | A | 0.0000 | |
84 | N | A | -1.8596 | |
85 | S | A | -1.4367 | |
86 | L | A | 0.0000 | |
87 | R | A | -2.4200 | |
88 | A | A | -1.8729 | |
89 | E | A | -2.2366 | |
90 | E | A | 0.0000 | |
91 | T | A | -0.6391 | |
92 | A | A | 0.0000 | |
93 | V | A | 0.1513 | |
94 | Y | A | 0.0000 | |
95 | Y | A | 0.0000 | |
96 | C | A | 0.0000 | |
97 | A | A | 0.0000 | |
98 | R | A | 0.0000 | |
99 | M | A | 0.0000 | |
100 | R | A | -0.6215 | |
101 | G | A | 0.0000 | |
102 | G | A | 0.0000 | |
103 | L | A | 0.0000 | |
104 | V | A | -0.1653 | |
105 | A | A | 0.0000 | |
106 | S | A | 0.0000 | |
107 | A | A | -1.1112 | |
108 | K | A | -1.2713 | |
109 | S | A | -1.2222 | |
110 | P | A | -1.5511 | |
111 | R | A | -2.2536 | |
112 | S | A | -1.4611 | |
113 | S | A | -1.0808 | |
114 | A | A | -1.1452 | |
115 | P | A | -1.4662 | |
116 | H | A | -2.0751 | |
117 | D | A | -1.9897 | |
118 | Y | A | -0.6783 | |
119 | Y | A | 0.0000 | |
120 | F | A | -0.4660 | |
121 | G | A | 0.0000 | |
122 | M | A | 0.0000 | |
123 | D | A | -0.4191 | |
124 | V | A | -0.0495 | |
125 | W | A | -0.0755 | |
126 | G | A | 0.0000 | |
127 | Q | A | -1.1427 | |
128 | G | A | 0.0000 | |
129 | T | A | -0.1628 | |
130 | T | A | 0.0151 | |
131 | V | A | 0.0000 | |
132 | T | A | -0.1217 | |
133 | V | A | 0.0000 | |
134 | S | A | -0.9457 | |
135 | S | A | -0.7154 | |
1 | S | B | -0.8188 | |
2 | Y | B | -1.1963 | |
3 | E | B | -2.1480 | |
4 | L | B | 0.0000 | |
5 | T | B | -0.7972 | |
6 | Q | B | -0.8084 | |
7 | P | B | -0.5925 | |
8 | P | B | -0.9407 | |
9 | S | B | -0.9544 | |
10 | V | B | -0.6936 | |
11 | S | B | -0.2608 | |
12 | V | B | -0.2674 | |
13 | S | B | -0.1080 | |
14 | P | B | -0.9075 | |
15 | G | B | -1.4052 | |
16 | Q | B | -1.6567 | |
17 | T | B | -1.4123 | |
18 | A | B | 0.0000 | |
19 | R | B | -1.8624 | |
20 | I | B | 0.0000 | |
21 | T | B | -0.6118 | |
22 | C | B | 0.0000 | |
23 | S | B | -0.8875 | |
24 | G | B | 0.0000 | |
25 | D | B | -2.5037 | |
26 | A | B | 0.0000 | |
27 | L | B | 0.0000 | |
28 | P | B | -1.4612 | |
29 | N | B | -1.9706 | |
30 | Q | B | 0.0000 | |
31 | Y | B | -0.1794 | |
32 | A | B | 0.0000 | |
33 | Y | B | 0.0000 | |
34 | W | B | 0.0000 | |
35 | Y | B | 0.0000 | |
36 | Q | B | 0.0000 | |
37 | Q | B | 0.0000 | |
38 | R | B | -2.1912 | |
39 | S | B | -1.4445 | |
40 | G | B | -1.3842 | |
41 | Q | B | -1.6732 | |
42 | A | B | -0.8824 | |
43 | P | B | 0.0000 | |
44 | V | B | 0.2155 | |
45 | L | B | 0.0000 | |
46 | V | B | 0.0000 | |
47 | I | B | 0.0000 | |
48 | S | B | 0.0000 | |
49 | K | B | -0.8080 | |
50 | D | B | 0.0000 | |
51 | T | B | -1.3168 | |
52 | E | B | -2.3601 | |
53 | R | B | -2.2143 | |
54 | P | B | -1.3059 | |
55 | S | B | -0.9825 | |
56 | G | B | -0.8451 | |
57 | I | B | -0.7510 | |
58 | P | B | -1.2991 | |
59 | E | B | -2.2465 | |
60 | R | B | -1.4832 | |
61 | F | B | 0.0000 | |
62 | S | B | -1.3527 | |
63 | G | B | -0.9985 | |
64 | S | B | -0.6207 | |
65 | S | B | -0.4594 | |
66 | S | B | -0.5774 | |
67 | G | B | -1.0599 | |
68 | A | B | -1.0767 | |
69 | T | B | -0.6359 | |
70 | V | B | 0.0000 | |
71 | T | B | -0.6729 | |
72 | L | B | 0.0000 | |
73 | T | B | -0.9481 | |
74 | I | B | 0.0000 | |
75 | S | B | -1.3848 | |
76 | G | B | -1.1613 | |
77 | V | B | 0.0000 | |
78 | Q | B | -1.9514 | |
79 | A | B | -1.4005 | |
80 | E | B | -2.5807 | |
81 | D | B | 0.0000 | |
82 | E | B | -2.4916 | |
83 | A | B | 0.0000 | |
84 | D | B | -2.0377 | |
85 | Y | B | 0.0000 | |
86 | Y | B | 0.0000 | |
87 | C | B | 0.0000 | |
88 | Q | B | 0.0000 | |
89 | S | B | 0.0000 | |
90 | A | B | 0.0000 | |
91 | D | B | -1.5327 | |
92 | N | B | -1.8673 | |
93 | S | B | -0.7937 | |
94 | A | B | -0.3141 | |
95 | T | B | 0.0511 | |
96 | F | B | 0.1634 | |
97 | W | B | 0.0000 | |
98 | V | B | -0.3381 | |
99 | F | B | 0.0000 | |
100 | G | B | 0.0000 | |
101 | G | B | -1.4602 | |
102 | G | B | -1.2600 | |
103 | T | B | 0.0000 | |
104 | R | B | -2.4456 | |
105 | L | B | 0.0000 | |
106 | T | B | -0.4941 | |
107 | V | B | -0.2341 | |
108 | L | B | 1.4241 |