Chain sequence(s) |
A: MSKSEEKQELPLETSPYTKYEDIEDYKKNAYGTSGHQDVKPGHGGGTTDAPTPSGDAAPSAIDSANQKAKK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:00) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.4680 | |
2 | S | A | -0.8160 | |
3 | K | A | -2.3849 | |
4 | S | A | -2.6551 | |
5 | E | A | -4.0333 | |
6 | E | A | -4.5126 | |
7 | K | A | -4.1726 | |
8 | Q | A | -3.3722 | |
9 | E | A | -2.3125 | |
10 | L | A | 0.1915 | |
11 | P | A | -0.0659 | |
12 | L | A | 0.5577 | |
13 | E | A | -1.2487 | |
14 | T | A | -0.6038 | |
15 | S | A | 0.0085 | |
16 | P | A | -0.1773 | |
17 | Y | A | 0.8462 | |
18 | T | A | -0.6608 | |
19 | K | A | -2.0749 | |
20 | Y | A | -1.7603 | |
21 | E | A | -2.6641 | |
22 | D | A | -2.2923 | |
23 | I | A | -0.1065 | |
24 | E | A | -1.9891 | |
25 | D | A | -2.2984 | |
26 | Y | A | -1.0401 | |
27 | K | A | -1.5326 | |
28 | K | A | -2.3666 | |
29 | N | A | -2.4089 | |
30 | A | A | -0.8036 | |
31 | Y | A | 0.0221 | |
32 | G | A | -1.2648 | |
33 | T | A | -1.1423 | |
34 | S | A | -1.6545 | |
35 | G | A | -2.0183 | |
36 | H | A | -2.3028 | |
37 | Q | A | -2.5219 | |
38 | D | A | -2.3194 | |
39 | V | A | -0.7715 | |
40 | K | A | -2.0609 | |
41 | P | A | -1.4705 | |
42 | G | A | -1.5303 | |
43 | H | A | -1.8411 | |
44 | G | A | -1.5106 | |
45 | G | A | -1.2815 | |
46 | G | A | -1.3685 | |
47 | T | A | -1.0264 | |
48 | T | A | -1.2777 | |
49 | D | A | -1.9613 | |
50 | A | A | -1.0596 | |
51 | P | A | -0.8470 | |
52 | T | A | -0.7286 | |
53 | P | A | -0.9037 | |
54 | S | A | -1.2083 | |
55 | G | A | -1.4749 | |
56 | D | A | -2.1095 | |
57 | A | A | -1.1378 | |
58 | A | A | -0.6798 | |
59 | P | A | -0.2171 | |
60 | S | A | 0.0400 | |
61 | A | A | 0.2688 | |
62 | I | A | 1.0415 | |
63 | D | A | -1.2793 | |
64 | S | A | -1.3399 | |
65 | A | A | -1.4090 | |
66 | N | A | -2.6677 | |
67 | Q | A | -3.0610 | |
68 | K | A | -3.2361 | |
69 | A | A | -2.5501 | |
70 | K | A | -3.1782 | |
71 | K | A | -2.8468 |