Chain sequence(s) |
A: MSQQQFNAGQNRGQAQEKAEQWTESAKQTAQSACDKTADLTQSARDKAADLTQSARDKTADGSHSANKSAQHNQEQAAGLFGQTGESVKNMAQGALDGVKNSLGMNEKK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:00) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.3021 | |
2 | S | A | -0.7163 | |
3 | Q | A | -1.6154 | |
4 | Q | A | -2.0061 | |
5 | Q | A | -1.7384 | |
6 | F | A | -0.5691 | |
7 | N | A | -2.5493 | |
8 | A | A | -2.3674 | |
9 | G | A | -2.4692 | |
10 | Q | A | -3.1966 | |
11 | N | A | -3.5436 | |
12 | R | A | -4.1707 | |
13 | G | A | -3.8346 | |
14 | Q | A | -4.2600 | |
15 | A | A | -3.6322 | |
16 | Q | A | -4.3333 | |
17 | E | A | -4.6877 | |
18 | K | A | -4.1384 | |
19 | A | A | -3.0738 | |
20 | E | A | -4.1580 | |
21 | Q | A | -3.5996 | |
22 | W | A | -1.8047 | |
23 | T | A | -2.4961 | |
24 | E | A | -3.5765 | |
25 | S | A | -2.3330 | |
26 | A | A | -2.0854 | |
27 | K | A | -3.3105 | |
28 | Q | A | -2.8630 | |
29 | T | A | -1.9880 | |
30 | A | A | -1.8353 | |
31 | Q | A | -2.6951 | |
32 | S | A | -2.1867 | |
33 | A | A | -1.7484 | |
34 | C | A | -1.3807 | |
35 | D | A | -3.0707 | |
36 | K | A | -2.9082 | |
37 | T | A | -1.5791 | |
38 | A | A | -2.0572 | |
39 | D | A | -2.8846 | |
40 | L | A | -0.8693 | |
41 | T | A | -1.8685 | |
42 | Q | A | -3.2798 | |
43 | S | A | -2.3639 | |
44 | A | A | -2.4825 | |
45 | R | A | -3.7802 | |
46 | D | A | -4.3094 | |
47 | K | A | -3.6864 | |
48 | A | A | -2.4005 | |
49 | A | A | -2.7471 | |
50 | D | A | -3.3303 | |
51 | L | A | -1.1747 | |
52 | T | A | -2.0945 | |
53 | Q | A | -3.2887 | |
54 | S | A | -2.5469 | |
55 | A | A | -2.3552 | |
56 | R | A | -3.9226 | |
57 | D | A | -4.2660 | |
58 | K | A | -4.1482 | |
59 | T | A | -3.1180 | |
60 | A | A | -2.4712 | |
61 | D | A | -3.1881 | |
62 | G | A | -2.2361 | |
63 | S | A | -1.7094 | |
64 | H | A | -2.3191 | |
65 | S | A | -2.3825 | |
66 | A | A | -2.3543 | |
67 | N | A | -3.0551 | |
68 | K | A | -3.6552 | |
69 | S | A | -3.0066 | |
70 | A | A | -3.0454 | |
71 | Q | A | -4.1569 | |
72 | H | A | -4.2509 | |
73 | N | A | -4.1630 | |
74 | Q | A | -3.8555 | |
75 | E | A | -3.7583 | |
76 | Q | A | -2.7833 | |
77 | A | A | -1.3845 | |
78 | A | A | -0.9016 | |
79 | G | A | -0.7679 | |
80 | L | A | 0.8402 | |
81 | F | A | 1.3056 | |
82 | G | A | -0.3138 | |
83 | Q | A | -1.0036 | |
84 | T | A | -0.3292 | |
85 | G | A | -0.8771 | |
86 | E | A | -2.3498 | |
87 | S | A | -1.3051 | |
88 | V | A | -0.2817 | |
89 | K | A | -2.4518 | |
90 | N | A | -2.0167 | |
91 | M | A | -0.3075 | |
92 | A | A | -0.7878 | |
93 | Q | A | -1.5537 | |
94 | G | A | -1.2344 | |
95 | A | A | -0.4916 | |
96 | L | A | 0.0163 | |
97 | D | A | -1.8759 | |
98 | G | A | -0.9958 | |
99 | V | A | 0.5814 | |
100 | K | A | -1.4368 | |
101 | N | A | -1.9492 | |
102 | S | A | -0.3174 | |
103 | L | A | 0.5813 | |
104 | G | A | -0.6390 | |
105 | M | A | -0.9596 | |
106 | N | A | -3.0208 | |
107 | E | A | -3.5740 | |
108 | K | A | -3.5414 | |
109 | K | A | -3.1114 |