Project name: c3-tetra

Status: done

Started: 2026-03-03 11:12:26
Chain sequence(s) A: GPQQQQMLALIDDELDAMDEDELQQLSRLIEKKKRARLQRGAASSGTSPSSTSPVYDLQRYTAESLRLAPYPADLKVPTAFPQDHQPRGRILLSHDELMHTDYLLHIRQQFDWLEEPLLRKLVVEKIFAVYNAPNLHTLLAIIDETLSYMKYHHLHGLPVNPHDPYLETVGGMRQLLFNKLNNLDLGCILDHQDGWGDHCSTLKRLVKKPGQMSAWLRDDVCDLQKRPPETFSQPMHRAMAYVCSFSRVAVSLRRRALQVTGTPQFFDQFDTNNAMGTYRCGAVSDLILGALQCHECQNEMCELRIQRALAPYRFMIAYCPFDEQSLLDLTVFAGTTTTTA
C: GPQQQQMLALIDDELDAMDEDELQQLSRLIEKKKRARLQRGAASSGTSPSSTSPVYDLQRYTAESLRLAPYPADLKVPTAFPQDHQPRGRILLSHDELMHTDYLLHIRQQFDWLEEPLLRKLVVEKIFAVYNAPNLHTLLAIIDETLSYMKYHHLHGLPVNPHDPYLETVGGMRQLLFNKLNNLDLGCILDHQDGWGDHCSTLKRLVKKPGQMSAWLRDDVCDLQKRPPETFSQPMHRAMAYVCSFSRVAVSLRRRALQVTGTPQFFDQFDTNNAMGTYRCGAVSDLILGALQCHECQNEMCELRIQRALAPYRFMIAYCPFDEQSLLDLTVFAGTTTTTA
B: GPQQQQMLALIDDELDAMDEDELQQLSRLIEKKKRARLQRGAASSGTSPSSTSPVYDLQRYTAESLRLAPYPADLKVPTAFPQDHQPRGRILLSHDELMHTDYLLHIRQQFDWLEEPLLRKLVVEKIFAVYNAPNLHTLLAIIDETLSYMKYHHLHGLPVNPHDPYLETVGGMRQLLFNKLNNLDLGCILDHQDGWGDHCSTLKRLVKKPGQMSAWLRDDVCDLQKRPPETFSQPMHRAMAYVCSFSRVAVSLRRRALQVTGTPQFFDQFDTNNAMGTYRCGAVSDLILGALQCHECQNEMCELRIQRALAPYRFMIAYCPFDEQSLLDLTVFAGTTTTTA
D: GPQQQQMLALIDDELDAMDEDELQQLSRLIEKKKRARLQRGAASSGTSPSSTSPVYDLQRYTAESLRLAPYPADLKVPTAFPQDHQPRGRILLSHDELMHTDYLLHIRQQFDWLEEPLLRKLVVEKIFAVYNAPNLHTLLAIIDETLSYMKYHHLHGLPVNPHDPYLETVGGMRQLLFNKLNNLDLGCILDHQDGWGDHCSTLKRLVKKPGQMSAWLRDDVCDLQKRPPETFSQPMHRAMAYVCSFSRVAVSLRRRALQVTGTPQFFDQFDTNNAMGTYRCGAVSDLILGALQCHECQNEMCELRIQRALAPYRFMIAYCPFDEQSLLDLTVFAGTTTTTA
input PDB
Selected Chain(s) A,B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage A: GPQQQQMLALIDDELDAMDEDELQQLSRLIEKKKRARLQRGAASSGTSPSSTSPVYDLQRYTAESLRLAPYPADLKVPTAFPQDHQPRGRILLSHDELMHTDYLLHIRQQFDWLEEPLLRKLVVEKIFAVYNAPNLHTLLAIIDETLSYMKYHHLHGLPVNPHDPYLETVGGMRQLLFNKLNNLDLGCILDHQDGWGDHCSTLKRLVKKPGQMSAWLRDDVCDLQKRPPETFS

QPMHRAMAYVCSFSRVAVSLRRRAL

QVTGTPQFFDQFDTNNAMGTYRCGAVSDLILGALQCHECQNEMCELRIQRALAPYRFMIAYCPFDEQSLLDLTVFAGTTTTTA
C: GPQQQQMLALIDDELDAMDEDELQQLSRLIEKKKRARLQRGAASSGTSPSSTSPVYDLQRYTAESLRLAPYPADLKVPTAFPQDHQPRGRILLSHDELMHTDYLLHIRQQFDWLEEPLLRKLVVEKIFAVYNAPNLHTLLAIIDETLSYMKYHHLHGLPVNPHDPYLETVGGMRQLLFNKLNNLDLGCILDHQDGWGDHCSTLKRLVKKPGQMSAWLRDDVCDLQKRPPETFS

QPMHRAMAYVCSFSRVAVSLRRRAL

QVTGTPQFFDQFDTNNAMGTYRCGAVSDLILGALQCHECQNEMCELRIQRALAPYRFMIAYCPFDEQSLLDLTVFAGTTTTTA
B: GPQQQQMLALIDDELDAMDEDELQQLSRLIEKKKRARLQRGAASSGTSPSSTSPVYDLQRYTAESLRLAPYPADLKVPTAFPQDHQPRGRILLSHDELMHTDYLLHIRQQFDWLEEPLLRKLVVEKIFAVYNAPNLHTLLAIIDETLSYMKYHHLHGLPVNPHDPYLETVGGMRQLLFNKLNNLDLGCILDHQDGWGDHCSTLKRLVKKPGQMSAWLRDDVCDLQKRPPETFS

QPMHRAMAYVCSFSRVAVSLRRRAL

QVTGTPQFFDQFDTNNAMGTYRCGAVSDLILGALQCHECQNEMCELRIQRALAPYRFMIAYCPFDEQSLLDLTVFAGTTTTTA
D: GPQQQQMLALIDDELDAMDEDELQQLSRLIEKKKRARLQRGAASSGTSPSSTSPVYDLQRYTAESLRLAPYPADLKVPTAFPQDHQPRGRILLSHDELMHTDYLLHIRQQFDWLEEPLLRKLVVEKIFAVYNAPNLHTLLAIIDETLSYMKYHHLHGLPVNPHDPYLETVGGMRQLLFNKLNNLDLGCILDHQDGWGDHCSTLKRLVKKPGQMSAWLRDDVCDLQKRPPETFS

QPMHRAMAYVCSFSRVAVSLRRRAL

QVTGTPQFFDQFDTNNAMGTYRCGAVSDLILGALQCHECQNEMCELRIQRALAPYRFMIAYCPFDEQSLLDLTVFAGTTTTTA
(Red indicates removed residues)
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       PDB:      Running AlphaCutter                                                         (00:00:01)
[INFO]       PDB-Info: The input structure is partially or entirely disordered. Average score is   
                       recommended for pH analysis.                                                (00:00:45)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:45)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:23:17)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/e461747b20a1904/tmp/folded.pdb                (00:23:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:29:58)
Show buried residues

Minimal score value
-3.8004
Maximal score value
1.5741
Average score
-0.8088
Total score value
-1022.3475

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
200 G A -1.5868
201 P A -1.8671
202 Q A -2.4022
203 Q A -2.0912
204 Q A -2.1874
205 Q A -1.8192
206 M A -1.0380
207 L A -0.8475
208 A A -0.7275
209 L A 0.2248
210 I A 0.0000
211 D A -1.4983
212 D A -2.3897
213 E A -1.9393
214 L A 0.0000
215 D A -3.0590
216 A A -1.8760
217 M A 0.0000
218 D A -2.5308
219 E A -2.5678
220 D A -3.0030
221 E A 0.0000
222 L A 0.0000
223 Q A 0.0000
224 Q A -1.2571
225 L A 0.0000
226 S A -1.5760
227 R A -1.6359
228 L A -1.5548
229 I A 0.0000
230 E A -3.0609
231 K A -3.2328
232 K A 0.0000
233 K A -2.9934
234 R A -3.3140
235 A A -2.4622
236 R A -2.5763
237 L A -1.3118
238 Q A -2.4034
239 R A -2.7650
240 G A -1.6595
241 A A -1.1234
242 A A -1.0752
243 S A -1.1531
244 S A -1.1253
245 G A -1.0487
246 T A -0.6032
247 S A -0.7735
248 P A -0.8836
249 S A -0.4932
250 S A -0.4414
251 T A -0.2776
252 S A -0.2652
253 P A -0.0937
254 V A 0.4756
255 Y A 0.1874
256 D A -0.6300
257 L A -0.7416
258 Q A -1.3808
259 R A -2.0205
260 Y A -1.2464
261 T A -1.4172
262 A A -1.6625
263 E A -2.4967
264 S A -1.8152
265 L A -1.6094
266 R A -2.5788
267 L A 0.0000
268 A A -0.8894
269 P A -0.5791
270 Y A 0.0855
271 P A -0.0750
272 A A -0.0754
273 D A -0.5914
274 L A 0.0000
275 K A 0.0000
276 V A 0.5572
277 P A 0.0000
278 T A 0.0000
279 A A 0.0000
280 F A 0.3281
281 P A 0.0000
282 Q A -0.5300
283 D A 0.0000
284 H A -0.7377
285 Q A -0.5119
286 P A -0.3820
287 R A 0.0000
288 G A 0.0000
289 R A -0.3189
290 I A 0.0000
291 L A 0.0000
292 L A 0.0000
293 S A -1.4824
294 H A -1.9656
295 D A -2.5995
296 E A -1.3170
297 L A 0.0000
298 M A 0.0000
299 H A -1.5008
300 T A 0.0000
301 D A 0.0000
302 Y A 0.0000
303 L A 0.0000
304 L A 0.0000
305 H A -0.4215
306 I A 0.0000
307 R A 0.0000
308 Q A -0.6348
309 Q A -0.2169
310 F A 0.0000
311 D A -0.8582
312 W A -0.1215
313 L A -0.6610
314 E A -1.6298
315 E A -2.4970
316 P A -1.7733
317 L A -0.8151
318 L A 0.0000
319 R A -2.0900
320 K A -1.5765
321 L A 0.0000
322 V A 0.0000
323 V A 0.0000
324 E A 0.0000
325 K A 0.0000
326 I A 0.1934
327 F A 0.0000
328 A A 0.0000
329 V A 0.0000
330 Y A 0.5475
331 N A 0.0000
332 A A 0.0000
333 P A 0.0000
334 N A 0.0000
335 L A 0.0000
336 H A 0.0000
337 T A 0.0000
338 L A 0.0000
339 L A 0.0000
340 A A 0.0000
341 I A 0.0000
342 I A 0.0000
343 D A 0.0000
344 E A 0.0000
345 T A 0.0000
346 L A 0.3402
347 S A 0.0000
348 Y A 0.0000
349 M A 0.4758
350 K A 0.0000
351 Y A 0.0000
352 H A 0.0000
353 H A -0.2585
354 L A 0.6163
355 H A 0.0718
356 G A -0.1853
357 L A 0.0000
358 P A 0.0000
359 V A 0.0000
360 N A 0.0000
361 P A -0.4604
362 H A -1.0226
363 D A 0.0000
364 P A 0.0000
365 Y A 0.0000
366 L A -0.1606
367 E A -0.9389
368 T A 0.0000
369 V A -0.2729
370 G A -0.9421
371 G A -0.8866
372 M A 0.0000
373 R A -2.2889
374 Q A -2.1646
375 L A -0.9446
376 L A -0.8642
377 F A 0.0000
378 N A -1.3241
379 K A -0.6019
380 L A -0.4918
381 N A -0.9777
382 N A 0.0000
383 L A 0.0000
384 D A -1.2354
385 L A 0.0000
386 G A 0.0000
387 C A -1.9239
388 I A 0.0000
389 L A -0.8892
390 D A -1.6976
391 H A -2.1873
392 Q A -2.5251
393 D A -2.6569
394 G A -1.2544
395 W A -0.5372
396 G A -1.4488
397 D A -2.0453
398 H A -1.7590
399 C A 0.0000
400 S A -1.0484
401 T A -0.9561
402 L A -0.7974
403 K A -1.4813
404 R A -1.4084
405 L A -1.2509
406 V A -1.4782
407 K A -2.5352
408 K A -2.7641
409 P A -2.1241
410 G A -2.0175
411 Q A -2.5596
412 M A 0.0000
413 S A -0.4688
414 A A -0.4197
415 W A 0.2476
416 L A -0.8268
417 R A -2.6305
418 D A -3.1507
419 D A -3.2044
420 V A 0.0000
421 C A -3.0476
422 D A -3.7739
423 L A -2.4831
424 Q A -2.4754
425 K A -3.1686
426 R A -2.9396
427 P A -2.0658
428 P A -1.7630
429 E A -2.2656
430 T A -1.2361
431 F A -0.8668
432 S A -0.9372
433 Q A -1.2035
459 V A 1.5572
460 T A 0.6214
461 G A 0.0610
462 T A 0.3060
463 P A 0.2180
464 Q A -0.0731
465 F A -0.2860
466 F A 0.0000
467 D A -1.8644
468 Q A -1.1284
469 F A 0.5286
470 D A -0.7473
471 T A -1.0256
472 N A -1.5419
473 N A -2.1186
474 A A -1.6270
475 M A -0.5826
476 G A -0.9975
477 T A -1.2387
478 Y A -1.0851
479 R A -1.9847
480 C A 0.0000
481 G A 0.0000
482 A A -0.3274
483 V A 0.3261
484 S A 0.0000
485 D A -0.6191
486 L A 1.0116
487 I A 0.7236
488 L A 0.0000
489 G A 0.1071
490 A A -0.0062
491 L A 0.0000
492 Q A -0.8077
493 C A -0.1135
494 H A -1.1113
495 E A -2.3679
496 C A -2.1994
497 Q A -2.4909
498 N A -2.7808
499 E A -3.0330
500 M A -2.0775
501 C A 0.0000
502 E A -2.9982
503 L A 0.0000
504 R A -1.1747
505 I A -0.7387
506 Q A -0.7658
507 R A 0.0000
508 A A 0.0000
509 L A 0.0112
510 A A 0.0000
511 P A 0.0000
512 Y A 0.0000
513 R A 0.0000
514 F A 0.0000
515 M A 0.0000
516 I A 0.0000
517 A A 0.0000
518 Y A 0.0000
519 C A 0.0000
520 P A 0.0000
521 F A -1.1228
522 D A -2.2325
523 E A -2.7406
524 Q A -1.7462
525 S A 0.0000
526 L A -0.4313
527 L A 0.0000
528 D A 0.0000
529 L A 0.0000
530 T A -0.0475
531 V A 0.0000
532 F A 0.0000
533 A A 0.0000
534 G A -0.2075
535 T A -0.1343
536 T A 0.0000
537 T A -0.0417
538 T A 0.0000
539 T A 0.0372
540 A A -0.0317
200 G B -1.5834
201 P B -1.8595
202 Q B -2.3888
203 Q B -2.0748
204 Q B -2.1690
205 Q B -1.7808
206 M B -1.0262
207 L B -0.8414
208 A B -0.7247
209 L B 0.2202
210 I B 0.0000
211 D B -1.4993
212 D B -2.4186
213 E B -2.0590
214 L B 0.0000
215 D B -3.1602
216 A B -2.0131
217 M B 0.0000
218 D B -2.9057
219 E B -2.7927
220 D B -3.1404
221 E B -2.2506
222 L B 0.0000
223 Q B 0.0000
224 Q B -1.3956
225 L B 0.0000
226 S B -1.6618
227 R B -1.7465
228 L B -1.5970
229 I B 0.0000
230 E B -2.9788
231 K B -3.1196
232 K B 0.0000
233 K B -3.0422
234 R B -3.2474
235 A B -2.4105
236 R B -2.5607
237 L B -1.4055
238 Q B -2.3125
239 R B -2.6664
240 G B -1.4802
241 A B -1.0144
242 A B -1.0146
243 S B -1.1311
244 S B -1.0907
245 G B -1.0075
246 T B -0.6071
247 S B -0.7906
248 P B -0.9679
249 S B -0.5354
250 S B -0.4629
251 T B -0.3085
252 S B -0.3130
253 P B -0.1914
254 V B 0.3352
255 Y B 0.1064
256 D B -0.7627
257 L B 0.0000
258 Q B -1.4972
259 R B -2.1434
260 Y B -1.4563
261 T B -1.4898
262 A B -1.6502
263 E B -2.4827
264 S B -1.8311
265 L B -1.6042
266 R B -2.5260
267 L B -1.4352
268 A B -0.8291
269 P B -0.5542
270 Y B 0.0756
271 P B -0.1068
272 A B -0.1109
273 D B -0.6316
274 L B 0.0000
275 K B 0.0000
276 V B 0.4010
277 P B 0.0000
278 T B 0.0000
279 A B 0.0000
280 F B 0.5482
281 P B 0.0000
282 Q B -0.2628
283 D B 0.0000
284 H B -0.6511
285 Q B -0.4953
286 P B -0.4715
287 R B 0.0000
288 G B 0.0000
289 R B -0.3630
290 I B 0.0000
291 L B 0.0000
292 L B 0.0000
293 S B -1.4540
294 H B -1.9185
295 D B -2.5898
296 E B -1.3218
297 L B 0.0000
298 M B 0.0000
299 H B -1.4821
300 T B 0.0000
301 D B 0.0000
302 Y B 0.0000
303 L B 0.0000
304 L B 0.0000
305 H B -0.4494
306 I B 0.0000
307 R B 0.0000
308 Q B -0.5511
309 Q B -0.1328
310 F B 0.0000
311 D B -0.8732
312 W B -0.0695
313 L B -0.7113
314 E B -1.6514
315 E B -2.4871
316 P B -1.7792
317 L B -0.8669
318 L B 0.0000
319 R B -2.0424
320 K B -1.7913
321 L B 0.0000
322 V B 0.0000
323 V B 0.0000
324 E B 0.0000
325 K B 0.0000
326 I B 0.1713
327 F B 0.0000
328 A B 0.0000
329 V B 0.0000
330 Y B 0.4953
331 N B 0.0000
332 A B 0.0000
333 P B 0.0000
334 N B 0.0000
335 L B 0.0000
336 H B 0.0000
337 T B 0.0000
338 L B 0.0000
339 L B 0.0000
340 A B 0.0000
341 I B 0.0000
342 I B 0.0000
343 D B 0.0000
344 E B 0.0000
345 T B 0.0000
346 L B 0.3596
347 S B 0.0000
348 Y B 0.0000
349 M B 0.5157
350 K B 0.0000
351 Y B 0.0000
352 H B 0.0000
353 H B -0.2134
354 L B 0.6244
355 H B 0.0487
356 G B -0.1832
357 L B 0.0000
358 P B 0.0000
359 V B 0.0000
360 N B 0.0000
361 P B -0.4439
362 H B -0.9791
363 D B 0.0000
364 P B 0.0000
365 Y B 0.0000
366 L B -0.0823
367 E B -0.8399
368 T B 0.0000
369 V B -0.2199
370 G B -0.9152
371 G B -0.8807
372 M B 0.0000
373 R B -2.2683
374 Q B -2.1585
375 L B -0.9504
376 L B -0.9251
377 F B 0.0000
378 N B -1.4163
379 K B -0.6936
380 L B 0.0000
381 N B -1.1078
382 N B 0.0000
383 L B 0.0000
384 D B -1.2073
385 L B 0.0000
386 G B 0.0000
387 C B -1.7636
388 I B -0.8406
389 L B -0.8276
390 D B -1.6405
391 H B -2.0593
392 Q B -2.2995
393 D B -2.5387
394 G B -1.2379
395 W B -0.5863
396 G B -1.4408
397 D B -2.0795
398 H B -1.8123
399 C B 0.0000
400 S B -1.0648
401 T B -0.9425
402 L B -0.7678
403 K B -1.4264
404 R B -1.3194
405 L B -1.1765
406 V B -1.3905
407 K B -2.3818
408 K B -2.6931
409 P B -2.0895
410 G B -1.9967
411 Q B -2.5265
412 M B 0.0000
413 S B -0.4696
414 A B -0.4005
415 W B 0.2621
416 L B -0.8010
417 R B -2.5042
418 D B -3.0900
419 D B -3.1597
420 V B 0.0000
421 C B -2.9781
422 D B -3.7424
423 L B -2.4436
424 Q B -2.4329
425 K B -3.1554
426 R B -2.9335
427 P B -2.0570
428 P B -1.7495
429 E B -2.2557
430 T B -1.2187
431 F B -0.8313
432 S B -0.9187
433 Q B -1.2041
459 V B 1.5741
460 T B 0.6134
461 G B 0.0347
462 T B 0.2996
463 P B 0.2272
464 Q B 0.0628
465 F B -0.1429
466 F B -0.2225
467 D B -1.7587
468 Q B -1.0415
469 F B 0.6153
470 D B -0.6752
471 T B -0.9907
472 N B -1.5203
473 N B -2.1109
474 A B -1.6112
475 M B -0.5377
476 G B -0.9903
477 T B -1.2197
478 Y B -1.0377
479 R B -1.8649
480 C B 0.0000
481 G B 0.0000
482 A B -0.1404
483 V B 0.4613
484 S B 0.0000
485 D B -0.2248
486 L B 1.1955
487 I B 0.8146
488 L B 0.0000
489 G B 0.2220
490 A B 0.0714
491 L B 0.0000
492 Q B -0.8482
493 C B -0.0942
494 H B -1.0754
495 E B -2.3330
496 C B -2.1446
497 Q B -2.4532
498 N B -2.7041
499 E B -2.9777
500 M B -2.0499
501 C B 0.0000
502 E B -3.0193
503 L B 0.0000
504 R B -1.2095
505 I B -0.7799
506 Q B -0.8395
507 R B 0.0000
508 A B 0.0000
509 L B 0.0205
510 A B 0.0000
511 P B -0.0506
512 Y B 0.0000
513 R B 0.0000
514 F B 0.0000
515 M B 0.0000
516 I B 0.0000
517 A B 0.0000
518 Y B 0.0000
519 C B 0.0000
520 P B 0.0000
521 F B -1.2127
522 D B -2.3839
523 E B -2.7902
524 Q B -1.7430
525 S B 0.0000
526 L B -0.4371
527 L B 0.0000
528 D B 0.0000
529 L B 0.0000
530 T B -0.0771
531 V B 0.0000
532 F B 0.0000
533 A B 0.0000
534 G B -0.2306
535 T B -0.1447
536 T B 0.0000
537 T B -0.1390
538 T B 0.0000
539 T B -0.0898
540 A B -0.1069
200 G C -1.6246
201 P C -1.8959
202 Q C -2.4463
203 Q C -2.1180
204 Q C -2.2466
205 Q C -1.8348
206 M C -1.0893
207 L C -0.9462
208 A C -0.8056
209 L C -0.0515
210 I C 0.0000
211 D C -1.6398
212 D C -2.5300
213 E C -2.1730
214 L C 0.0000
215 D C -3.0346
216 A C -1.9913
217 M C 0.0000
218 D C -2.6831
219 E C -2.7893
220 D C -3.1355
221 E C 0.0000
222 L C 0.0000
223 Q C -2.0180
224 Q C -1.7558
225 L C 0.0000
226 S C -1.8409
227 R C -2.2507
228 L C -1.9026
229 I C 0.0000
230 E C -3.4053
231 K C -3.3646
232 K C 0.0000
233 K C -3.1612
234 R C -3.3544
235 A C -2.4906
236 R C -2.5835
237 L C -1.4268
238 Q C -2.3864
239 R C -2.7637
240 G C -1.6639
241 A C -1.1759
242 A C -1.1039
243 S C -1.1854
244 S C -1.2224
245 G C -1.0812
246 T C -0.6516
247 S C -0.8278
248 P C -1.0003
249 S C -0.5391
250 S C -0.4633
251 T C -0.2460
252 S C -0.3290
253 P C -0.1478
254 V C 0.3999
255 Y C 0.0441
256 D C -0.7749
257 L C 0.0000
258 Q C -1.6413
259 R C -2.3748
260 Y C -1.4630
261 T C -1.5335
262 A C -1.6854
263 E C -2.6698
264 S C -1.8324
265 L C -1.6298
266 R C -2.5627
267 L C -1.5107
268 A C -0.8859
269 P C -0.5861
270 Y C 0.0828
271 P C -0.0048
272 A C 0.0485
273 D C 0.0000
274 L C 0.0000
275 K C 0.0000
276 V C 0.5008
277 P C 0.0000
278 T C 0.0000
279 A C 0.0000
280 F C 0.3037
281 P C 0.0000
282 Q C -0.4475
283 D C 0.0000
284 H C -0.6645
285 Q C -0.4691
286 P C -0.3677
287 R C 0.0000
288 G C 0.0000
289 R C -0.2405
290 I C 0.0000
291 L C 0.0000
292 L C 0.0000
293 S C -1.4444
294 H C -1.9326
295 D C -2.6569
296 E C -1.3905
297 L C 0.0000
298 M C 0.0000
299 H C -1.7231
300 T C 0.0000
301 D C 0.0000
302 Y C 0.0000
303 L C 0.0000
304 L C 0.0000
305 H C -0.5294
306 I C 0.0000
307 R C 0.0000
308 Q C -0.7694
309 Q C -0.2758
310 F C 0.0000
311 D C -0.8867
312 W C -0.1955
313 L C -0.4905
314 E C -1.5262
315 E C -2.2737
316 P C -1.6421
317 L C -0.8840
318 L C 0.0000
319 R C -2.7153
320 K C -1.6923
321 L C 0.0000
322 V C 0.0000
323 V C 0.0000
324 E C 0.0000
325 K C 0.0000
326 I C 0.0684
327 F C 0.0000
328 A C 0.0000
329 V C 0.0000
330 Y C 0.5368
331 N C 0.0000
332 A C 0.0000
333 P C 0.0000
334 N C 0.0000
335 L C 0.0000
336 H C 0.0000
337 T C 0.0000
338 L C 0.0000
339 L C 0.0000
340 A C 0.0000
341 I C 0.0000
342 I C 0.0000
343 D C 0.0000
344 E C 0.0000
345 T C 0.0000
346 L C 0.3667
347 S C 0.0000
348 Y C 0.0000
349 M C 0.4977
350 K C 0.0000
351 Y C 0.0000
352 H C 0.0000
353 H C -0.2597
354 L C 0.5143
355 H C -0.0076
356 G C -0.2129
357 L C 0.0000
358 P C 0.0000
359 V C 0.0000
360 N C 0.0000
361 P C -0.8582
362 H C -1.8663
363 D C 0.0000
364 P C 0.0000
365 Y C 0.0000
366 L C -0.6023
367 E C -1.8270
368 T C 0.0000
369 V C -0.3828
370 G C -1.0128
371 G C -0.8667
372 M C 0.0000
373 R C -1.8912
374 Q C -1.9416
375 L C -0.8530
376 L C -0.7892
377 F C 0.0000
378 N C -1.3254
379 K C -0.6879
380 L C 0.0000
381 N C -1.1221
382 N C 0.0000
383 L C 0.0000
384 D C -1.2654
385 L C 0.0000
386 G C 0.0000
387 C C -1.9248
388 I C 0.0000
389 L C -0.9293
390 D C -1.7332
391 H C -2.2088
392 Q C -2.5593
393 D C -2.7037
394 G C -1.3534
395 W C -0.6903
396 G C -1.5228
397 D C -2.0594
398 H C -1.7650
399 C C 0.0000
400 S C -1.0101
401 T C -0.8923
402 L C -0.7030
403 K C -1.2731
404 R C -1.2475
405 L C -1.0895
406 V C -1.2648
407 K C -2.2651
408 K C -2.6781
409 P C -2.1055
410 G C -2.0145
411 Q C -2.5433
412 M C 0.0000
413 S C -0.5064
414 A C -0.4582
415 W C 0.2012
416 L C -0.8856
417 R C -2.6287
418 D C -3.1312
419 D C -3.1813
420 V C 0.0000
421 C C -2.8969
422 D C -3.7103
423 L C -2.4456
424 Q C -2.4495
425 K C -3.1375
426 R C -2.9023
427 P C -2.0502
428 P C -1.7510
429 E C -2.2527
430 T C -1.2163
431 F C -0.8312
432 S C -0.9228
433 Q C -1.1989
459 V C 1.5659
460 T C 0.6236
461 G C 0.0492
462 T C 0.2964
463 P C 0.2117
464 Q C -0.0024
465 F C -0.2139
466 F C -0.2594
467 D C -1.7876
468 Q C -1.0623
469 F C 0.6039
470 D C -0.6790
471 T C -0.9821
472 N C -1.5133
473 N C -2.1061
474 A C -1.5998
475 M C -0.5442
476 G C -1.0070
477 T C -1.2078
478 Y C -1.0079
479 R C -1.7810
480 C C 0.0000
481 G C 0.0000
482 A C -0.0027
483 V C 0.5574
484 S C 0.0000
485 D C 0.0728
486 L C 1.3303
487 I C 0.8988
488 L C 0.0000
489 G C 0.3032
490 A C 0.0854
491 L C 0.0000
492 Q C -0.8023
493 C C -0.1253
494 H C -1.0840
495 E C -2.3374
496 C C -2.1597
497 Q C -2.4638
498 N C -2.7393
499 E C -2.9491
500 M C -2.1040
501 C C 0.0000
502 E C -2.7707
503 L C 0.0000
504 R C -1.1265
505 I C -0.6972
506 Q C -0.7391
507 R C 0.0000
508 A C 0.0000
509 L C -0.0122
510 A C 0.0000
511 P C -0.0619
512 Y C 0.0000
513 R C 0.0000
514 F C 0.0000
515 M C 0.0000
516 I C 0.0000
517 A C 0.0000
518 Y C 0.0000
519 C C 0.0000
520 P C 0.0000
521 F C -1.1572
522 D C -2.2975
523 E C -2.6631
524 Q C -1.8788
525 S C 0.0000
526 L C -0.4733
527 L C 0.0000
528 D C 0.0000
529 L C 0.0000
530 T C -0.0769
531 V C 0.0000
532 F C 0.0000
533 A C 0.0000
534 G C -0.2151
535 T C -0.1415
536 T C 0.0000
537 T C -0.1167
538 T C 0.0000
539 T C -0.0763
540 A C -0.1018
200 G D -1.6003
201 P D -1.8723
202 Q D -2.4038
203 Q D -2.1353
204 Q D -2.2209
205 Q D -1.8591
206 M D -1.0734
207 L D -0.9168
208 A D -0.8587
209 L D -0.2322
210 I D 0.0000
211 D D -1.5979
212 D D -2.5240
213 E D -2.1231
214 L D 0.0000
215 D D -2.9618
216 A D -1.9060
217 M D 0.0000
218 D D -2.4936
219 E D -2.4483
220 D D -2.9642
221 E D 0.0000
222 L D 0.0000
223 Q D -1.9232
224 Q D -1.5264
225 L D 0.0000
226 S D -1.8098
227 R D -2.2174
228 L D -2.0628
229 I D 0.0000
230 E D -3.2229
231 K D -3.3981
232 K D 0.0000
233 K D -3.0607
234 R D -3.2574
235 A D -2.4101
236 R D -2.4647
237 L D -1.0672
238 Q D -2.3043
239 R D -2.7340
240 G D -1.6533
241 A D -1.1013
242 A D -1.0943
243 S D -1.2085
244 S D -1.2920
245 G D -1.0977
246 T D -0.6954
247 S D -0.6865
248 P D -1.0867
249 S D -0.5701
250 S D -0.4787
251 T D -0.2714
252 S D -0.3390
253 P D -0.1538
254 V D 0.3504
255 Y D 0.0895
256 D D -0.7609
257 L D 0.0000
258 Q D -1.8334
259 R D -2.4530
260 Y D -1.5295
261 T D -1.5289
262 A D -1.6487
263 E D -2.6672
264 S D -1.8294
265 L D -1.5902
266 R D -2.5174
267 L D -1.4242
268 A D -0.8193
269 P D -0.5502
270 Y D 0.0859
271 P D -0.0393
272 A D -0.0960
273 D D -0.6199
274 L D 0.0000
275 K D 0.0000
276 V D 0.4460
277 P D 0.0000
278 T D 0.0000
279 A D 0.0000
280 F D 0.2940
281 P D 0.0000
282 Q D -0.5410
283 D D 0.0000
284 H D -0.8864
285 Q D -0.7839
286 P D -0.4703
287 R D 0.0000
288 G D 0.0000
289 R D -0.3465
290 I D 0.0000
291 L D 0.0000
292 L D 0.0000
293 S D -1.4403
294 H D 0.0000
295 D D -2.5396
296 E D -1.2942
297 L D 0.0000
298 M D 0.0000
299 H D -1.4368
300 T D 0.0000
301 D D 0.0000
302 Y D 0.0000
303 L D 0.0000
304 L D 0.0000
305 H D -0.4269
306 I D 0.0000
307 R D 0.0000
308 Q D -0.6923
309 Q D -0.1664
310 F D 0.0000
311 D D -0.8317
312 W D -0.0857
313 L D -0.7204
314 E D -1.7897
315 E D -2.8296
316 P D -2.0965
317 L D -1.1646
318 L D 0.0000
319 R D -2.9487
320 K D -2.0425
321 L D 0.0000
322 V D 0.0000
323 V D 0.0000
324 E D 0.0000
325 K D 0.0000
326 I D 0.0445
327 F D 0.0000
328 A D 0.0000
329 V D 0.0000
330 Y D 0.5192
331 N D 0.0000
332 A D 0.0000
333 P D 0.0000
334 N D 0.0000
335 L D 0.0000
336 H D 0.0000
337 T D 0.0000
338 L D 0.0000
339 L D 0.0000
340 A D 0.0000
341 I D 0.0000
342 I D 0.0000
343 D D 0.0000
344 E D 0.0000
345 T D 0.0000
346 L D 0.3728
347 S D 0.0000
348 Y D 0.0000
349 M D 0.5177
350 K D 0.0000
351 Y D 0.0000
352 H D 0.0000
353 H D -0.2089
354 L D 0.6379
355 H D 0.0622
356 G D -0.1747
357 L D 0.0000
358 P D 0.0000
359 V D 0.0000
360 N D 0.0000
361 P D -0.8161
362 H D -1.9161
363 D D 0.0000
364 P D 0.0000
365 Y D 0.0000
366 L D -0.5572
367 E D -1.8014
368 T D 0.0000
369 V D -0.4338
370 G D -1.0848
371 G D -0.9951
372 M D 0.0000
373 R D -2.2816
374 Q D -2.1804
375 L D -0.9926
376 L D -0.9392
377 F D 0.0000
378 N D -1.3683
379 K D -0.6802
380 L D 0.0000
381 N D -1.0910
382 N D 0.0000
383 L D 0.0000
384 D D -1.2308
385 L D 0.0000
386 G D 0.0000
387 C D -1.8613
388 I D 0.0000
389 L D -0.9281
390 D D -1.7054
391 H D -2.1381
392 Q D -2.3791
393 D D -2.5953
394 G D -1.2553
395 W D -0.6330
396 G D -1.4553
397 D D -2.0768
398 H D -1.8283
399 C D 0.0000
400 S D -1.0395
401 T D -0.9061
402 L D -0.7058
403 K D -1.3436
404 R D -1.3029
405 L D -1.1370
406 V D -1.3723
407 K D -2.3664
408 K D -2.7233
409 P D -2.1928
410 G D -2.0469
411 Q D -2.5675
412 M D 0.0000
413 S D -0.5376
414 A D -0.4841
415 W D 0.1864
416 L D -0.9409
417 R D -2.7372
418 D D -3.2259
419 D D -3.2543
420 V D 0.0000
421 C D -3.0927
422 D D -3.8004
423 L D -2.4990
424 Q D -2.5117
425 K D -3.1889
426 R D -2.9323
427 P D -2.0568
428 P D -1.7548
429 E D -2.2519
430 T D -1.2147
431 F D -0.8283
432 S D -0.9191
433 Q D -1.2045
459 V D 1.5724
460 T D 0.6134
461 G D 0.0327
462 T D 0.2946
463 P D 0.2273
464 Q D 0.0383
465 F D -0.1725
466 F D -0.2348
467 D D -1.7667
468 Q D -1.0553
469 F D 0.6026
470 D D -0.6842
471 T D -0.9886
472 N D -1.5212
473 N D -2.1048
474 A D -1.5978
475 M D -0.5238
476 G D -0.9696
477 T D -1.1937
478 Y D -0.9937
479 R D -1.5933
480 C D 0.0000
481 G D 0.0000
482 A D -0.1203
483 V D 0.4753
484 S D 0.0000
485 D D -0.2533
486 L D 1.1959
487 I D 0.8131
488 L D 0.0000
489 G D 0.2349
490 A D 0.0348
491 L D 0.0000
492 Q D -0.8136
493 C D -0.1019
494 H D -1.0820
495 E D -2.3330
496 C D -1.9826
497 Q D -2.1857
498 N D -2.2471
499 E D -1.9392
500 M D -1.5934
501 C D 0.0000
502 E D -2.4026
503 L D 0.0000
504 R D -0.9642
505 I D -0.6767
506 Q D -0.7152
507 R D 0.0000
508 A D 0.0000
509 L D -0.0070
510 A D 0.0000
511 P D -0.0522
512 Y D 0.0000
513 R D 0.0000
514 F D 0.0000
515 M D 0.0000
516 I D 0.0000
517 A D 0.0000
518 Y D 0.0000
519 C D 0.0000
520 P D 0.0000
521 F D -0.9941
522 D D -2.0844
523 E D -2.6406
524 Q D -1.6291
525 S D 0.0000
526 L D -0.3228
527 L D 0.0000
528 D D 0.0000
529 L D 0.0000
530 T D -0.0527
531 V D 0.0000
532 F D 0.0000
533 A D 0.0000
534 G D -0.2201
535 T D -0.1426
536 T D 0.0000
537 T D -0.1083
538 T D 0.0000
539 T D -0.0552
540 A D -0.0416
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is partially or entirely disordered. Average score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.4767 4.0234 View CSV PDB
4.5 -0.5515 3.8966 View CSV PDB
5.0 -0.6408 3.7458 View CSV PDB
5.5 -0.7311 3.5846 View CSV PDB
6.0 -0.811 3.4199 View CSV PDB
6.5 -0.8739 3.2543 View CSV PDB
7.0 -0.9208 3.0892 View CSV PDB
7.5 -0.9574 2.9266 View CSV PDB
8.0 -0.9878 2.7711 View CSV PDB
8.5 -1.0105 2.6323 View CSV PDB
9.0 -1.0209 2.5239 View CSV PDB