Project name: e47647f3cc66dd6

Status: done

Started: 2025-02-21 07:13:38
Chain sequence(s) A: MSQEQPRRPQAGQDPIKYGDVLPVSGDLSQKPITPEDAAMMQSAESRVLGQTQPGGVASVMQSAATRNEQAGIVGHKDVTDVTGDRGVTVTETQVPGRRIITETVGGQVVGQFVEPTPVQVGLTGAVRESALTIGEALEATAHTVGDKPVEQSDASAIQAAEVRATGSNVITPGGLASMAQSAAAFNAECQREEEKIKMGNVLTGATAKLPADKAATRQDAAGVASAEMRNNPDATATPGGVAASVAAAARLNENVGNVM
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-4.4709
Maximal score value
1.806
Average score
-0.8489
Total score value
-220.7059

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 0.4065
2 S A -0.9445
3 Q A -2.2632
4 E A -3.2559
5 Q A -3.3342
6 P A -2.8683
7 R A -3.7092
8 R A -3.4212
9 P A -2.4625
10 Q A -2.4774
11 A A -1.6193
12 G A -1.8675
13 Q A -2.5899
14 D A -2.3635
15 P A -1.8626
16 I A -1.2852
17 K A -1.4390
18 Y A 0.0000
19 G A -1.6998
20 D A -1.8625
21 V A -0.2250
22 L A 0.0000
23 P A -0.3322
24 V A 0.0000
25 S A -1.1871
26 G A -1.7046
27 D A -2.4840
28 L A -1.7857
29 S A -1.9012
30 Q A -2.3960
31 K A -1.8362
32 P A -0.8894
33 I A 0.0000
34 T A 0.0000
35 P A -1.4084
36 E A -1.2291
37 D A 0.0000
38 A A 0.0000
39 A A -0.3074
40 M A 0.1625
41 M A 0.0000
42 Q A -1.0560
43 S A -0.8698
44 A A -0.7681
45 E A 0.0000
46 S A -1.6538
47 R A -2.1269
48 V A -1.0549
49 L A -0.9849
50 G A -1.5046
51 Q A -1.8849
52 T A -1.3190
53 Q A -0.9389
54 P A -0.7316
55 G A -0.5865
56 G A -0.4101
57 V A 0.0000
58 A A 0.0000
59 S A -0.3598
60 V A 0.2850
61 M A 0.0000
62 Q A -0.7773
63 S A -0.7332
64 A A 0.0000
65 A A 0.0000
66 T A -1.8437
67 R A -2.6794
68 N A 0.0000
69 E A -2.4104
70 Q A -2.3366
71 A A -2.0732
72 G A -1.4993
73 I A -0.7713
74 V A 0.0000
75 G A -1.8703
76 H A -2.4234
77 K A -2.5259
78 D A -1.9203
79 V A -0.1095
80 T A -0.6852
81 D A -1.5465
82 V A -1.4158
83 T A -1.8813
84 G A -2.3143
85 D A -2.9803
86 R A -3.1072
87 G A -1.8836
88 V A 0.0000
89 T A -0.3376
90 V A -0.4148
91 T A -0.9333
92 E A -1.2876
93 T A -1.2018
94 Q A -1.9234
95 V A -0.9238
96 P A -0.8021
97 G A -1.0085
98 R A -1.8430
99 R A -1.5615
100 I A -0.5793
101 I A 0.0000
102 T A -0.0537
103 E A 0.0000
104 T A -0.1492
105 V A 0.0000
106 G A -1.5248
107 G A -1.2182
108 Q A -0.2772
109 V A 0.8072
110 V A 0.0000
111 G A -0.1005
112 Q A -0.2850
113 F A 0.4506
114 V A 0.7305
115 E A -0.5174
116 P A -0.8049
117 T A -0.9795
118 P A -0.1279
119 V A 1.1695
120 Q A 0.3459
121 V A 1.5327
122 G A 0.7681
123 L A 1.8060
124 T A 0.8248
125 G A 0.4236
126 A A 0.5439
127 V A 0.5969
128 R A -1.6210
129 E A -1.4894
130 S A -0.7933
131 A A -0.3021
132 L A 0.0030
133 T A -0.4844
134 I A 0.0000
135 G A 0.0000
136 E A -1.0330
137 A A 0.0000
138 L A 0.0000
139 E A -1.0428
140 A A -0.7936
141 T A 0.0000
142 A A -1.4017
143 H A -1.3751
144 T A -0.8965
145 V A -0.9417
146 G A -1.7686
147 D A -2.3723
148 K A -1.6943
149 P A -1.9630
150 V A 0.0000
151 E A -2.0037
152 Q A -2.0651
153 S A 0.0000
154 D A 0.0000
155 A A 0.0000
156 S A 0.0000
157 A A 0.0000
158 I A 0.0000
159 Q A -0.1027
160 A A 0.0000
161 A A 0.0000
162 E A 0.0000
163 V A -0.0465
164 R A -1.0342
165 A A 0.0000
166 T A -0.6049
167 G A -0.7704
168 S A -0.0857
169 N A -0.2384
170 V A 1.7315
171 I A 1.7491
172 T A 0.6956
173 P A 0.0811
174 G A -0.4666
175 G A -0.2384
176 L A 0.0000
177 A A 0.0000
178 S A -0.0025
179 M A -0.1450
180 A A 0.0000
181 Q A -0.5450
182 S A 0.1225
183 A A 0.0000
184 A A 0.0000
185 A A -0.0452
186 F A 0.6526
187 N A 0.0000
188 A A -0.9123
189 E A -1.7801
190 C A -2.2324
191 Q A -3.2167
192 R A -4.4709
193 E A -4.3026
194 E A -4.0124
195 E A -3.1196
196 K A -2.6390
197 I A -0.9893
198 K A -2.1519
199 M A 0.0000
200 G A -1.5839
201 N A -1.5759
202 V A 0.0000
203 L A 0.0000
204 T A -0.8575
205 G A -0.6920
206 A A 0.0000
207 T A -0.8043
208 A A -0.5720
209 K A -0.8873
210 L A 0.0000
211 P A -0.6045
212 A A -0.6813
213 D A -1.0538
214 K A -1.1165
215 A A -0.4787
216 A A 0.0000
217 T A -1.6900
218 R A -2.9245
219 Q A -2.1537
220 D A 0.0000
221 A A 0.0000
222 A A -0.9002
223 G A -0.7303
224 V A 0.0000
225 A A -0.2792
226 S A -0.5836
227 A A -0.8285
228 E A 0.0000
229 M A -1.2143
230 R A -2.4641
231 N A -2.6267
232 N A -2.1764
233 P A -1.7894
234 D A -2.2484
235 A A -1.4623
236 T A -0.9496
237 A A -0.4429
238 T A -0.2884
239 P A -0.3164
240 G A -0.3643
241 G A 0.0000
242 V A 0.0000
243 A A 0.0000
244 A A -0.0852
245 S A -0.4379
246 V A 0.0000
247 A A -0.8398
248 A A -0.3994
249 A A 0.0000
250 A A 0.0000
251 R A -1.9938
252 L A 0.0752
253 N A -1.1070
254 E A -1.8443
255 N A -1.3646
256 V A -0.3435
257 G A -0.7919
258 N A -0.7547
259 V A 1.3493
260 M A 1.3826
Download PDB file
View in 3Dmol