Chain sequence(s) |
A: MAEEKHHHHLFHHHKEEKPAEEVIYSETAYSGGGDYASGYTETVVAESASDEYEKYKKEEKHHKHKEHLGEMGAVAAGAFALYEKHEAKKDPDHAHKHKIEEEIAAAVAVGSGGYAFHEHHEKKDAKKEAEEASGKKHHHHLF
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.6878 | |
2 | A | A | -0.6350 | |
3 | E | A | -2.9675 | |
4 | E | A | -3.8780 | |
5 | K | A | -3.9238 | |
6 | H | A | -3.2983 | |
7 | H | A | -2.7351 | |
8 | H | A | -1.7765 | |
9 | H | A | -0.6826 | |
10 | L | A | 1.2311 | |
11 | F | A | 1.4210 | |
12 | H | A | -0.7024 | |
13 | H | A | -1.8940 | |
14 | H | A | -2.7787 | |
15 | K | A | -3.8071 | |
16 | E | A | -4.2207 | |
17 | E | A | -4.0162 | |
18 | K | A | -3.1844 | |
19 | P | A | -2.0079 | |
20 | A | A | -1.6866 | |
21 | E | A | -2.1903 | |
22 | E | A | -1.2282 | |
23 | V | A | 1.7494 | |
24 | I | A | 2.5679 | |
25 | Y | A | 2.0766 | |
26 | S | A | 0.2564 | |
27 | E | A | -1.2823 | |
28 | T | A | -0.7069 | |
29 | A | A | -0.0015 | |
30 | Y | A | 0.8193 | |
31 | S | A | 0.0365 | |
32 | G | A | -0.5394 | |
33 | G | A | -1.2553 | |
34 | G | A | -1.4045 | |
35 | D | A | -1.4770 | |
36 | Y | A | 0.2637 | |
37 | A | A | 0.2185 | |
38 | S | A | 0.1940 | |
39 | G | A | 0.0203 | |
40 | Y | A | 0.4918 | |
41 | T | A | -0.2733 | |
42 | E | A | -0.8298 | |
43 | T | A | 0.3307 | |
44 | V | A | 1.7616 | |
45 | V | A | 1.9453 | |
46 | A | A | 0.3917 | |
47 | E | A | -1.9611 | |
48 | S | A | -1.3440 | |
49 | A | A | -1.6596 | |
50 | S | A | -2.4629 | |
51 | D | A | -3.9236 | |
52 | E | A | -3.6014 | |
53 | Y | A | -1.9078 | |
54 | E | A | -4.0146 | |
55 | K | A | -4.4276 | |
56 | Y | A | -2.7452 | |
57 | K | A | -4.0360 | |
58 | K | A | -4.7398 | |
59 | E | A | -4.1735 | |
60 | E | A | -4.4739 | |
61 | K | A | -4.7632 | |
62 | H | A | -4.0806 | |
63 | H | A | -3.6676 | |
64 | K | A | -3.6877 | |
65 | H | A | -3.0675 | |
66 | K | A | -2.1741 | |
67 | E | A | -1.6543 | |
68 | H | A | -1.4909 | |
69 | L | A | 0.1676 | |
70 | G | A | 0.0000 | |
71 | E | A | -0.2308 | |
72 | M | A | 0.9683 | |
73 | G | A | 1.0853 | |
74 | A | A | 1.4556 | |
75 | V | A | 2.3313 | |
76 | A | A | 1.4256 | |
77 | A | A | 2.1061 | |
78 | G | A | 2.0818 | |
79 | A | A | 1.8335 | |
80 | F | A | 2.3538 | |
81 | A | A | 0.0000 | |
82 | L | A | 1.6498 | |
83 | Y | A | 1.6415 | |
84 | E | A | 0.0000 | |
85 | K | A | -1.8607 | |
86 | H | A | -1.8645 | |
87 | E | A | -2.3185 | |
88 | A | A | -3.5715 | |
89 | K | A | -3.8814 | |
90 | K | A | -3.6402 | |
91 | D | A | -3.3689 | |
92 | P | A | -3.0264 | |
93 | D | A | -3.3596 | |
94 | H | A | -3.6287 | |
95 | A | A | -3.5795 | |
96 | H | A | -2.9040 | |
97 | K | A | -3.3139 | |
98 | H | A | -3.0323 | |
99 | K | A | -3.2227 | |
100 | I | A | -0.9611 | |
101 | E | A | -0.8865 | |
102 | E | A | -0.8756 | |
103 | E | A | -1.1293 | |
104 | I | A | 1.6826 | |
105 | A | A | 0.0000 | |
106 | A | A | 1.2617 | |
107 | A | A | 1.3035 | |
108 | V | A | 2.1255 | |
109 | A | A | 1.8908 | |
110 | V | A | 2.1644 | |
111 | G | A | 1.1240 | |
112 | S | A | 1.0519 | |
113 | G | A | 0.9386 | |
114 | G | A | 0.5635 | |
115 | Y | A | 0.4856 | |
116 | A | A | -0.0868 | |
117 | F | A | 0.7791 | |
118 | H | A | -0.5482 | |
119 | E | A | 0.0000 | |
120 | H | A | -1.6791 | |
121 | H | A | -2.1856 | |
122 | E | A | -3.2740 | |
123 | K | A | -3.9700 | |
124 | K | A | -4.6619 | |
125 | D | A | -5.0617 | |
126 | A | A | -4.2995 | |
127 | K | A | -5.3729 | |
128 | K | A | -5.8459 | |
129 | E | A | -5.2165 | |
130 | A | A | -4.1979 | |
131 | E | A | -5.2737 | |
132 | E | A | -4.7861 | |
133 | A | A | -2.8681 | |
134 | S | A | -3.0035 | |
135 | G | A | -2.9584 | |
136 | K | A | -3.9760 | |
137 | K | A | -4.0312 | |
138 | H | A | -3.2745 | |
139 | H | A | -2.7785 | |
140 | H | A | -1.7938 | |
141 | H | A | -0.5885 | |
142 | L | A | 1.5867 | |
143 | F | A | 2.2941 |