Project name: NP_2X_Stalk20

Status: done

Started: 2026-06-10 09:55:09
Chain sequence(s) A: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDELKSTQNAIDKITNKVNSVIEGSGYAADLKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH
B: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDELKSTQNAIDKITNKVNSVIEGSGYAADLKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage A: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDELKSTQNAIDKITNKVNSVIEGSGYAADLKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGA

NDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH


B: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDELKSTQNAIDKITNKVNSVIEGSGYAADLKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDR

ETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLN

LPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDAT

DGNDISLELVGDFDSHHHHHH


(Red indicates removed residues)
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       PDB:      Running AlphaCutter                                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:17)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:17)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:20:04)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/e817b4022e51146/tmp/folded.pdb                (00:20:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:27:14)
Show buried residues

Minimal score value
-4.4686
Maximal score value
2.1661
Average score
-0.7768
Total score value
-768.2318

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 S A 0.0816
2 S A 0.7516
3 V A 2.1661
4 L A 1.8214
5 K A -0.0423
6 T A 0.6622
7 F A 1.2602
8 E A -0.1652
9 R A -0.9123
10 F A 0.8020
11 T A -0.4334
12 I A -0.5746
13 Q A -1.6700
14 Q A -2.0111
15 E A -1.7666
16 L A -1.3998
17 Q A -2.9808
18 E A -3.6467
19 Q A -3.2392
20 S A -2.9655
21 E A -3.1824
22 D A -2.9245
23 T A -1.8279
24 P A 0.0859
25 I A 1.3718
26 P A 0.9029
27 L A 1.2366
28 E A -0.8043
29 T A -0.2755
30 I A 0.6083
31 R A -1.4972
32 P A -0.9606
33 T A -0.9101
34 I A 0.0000
35 R A -1.0107
36 V A 0.0000
37 F A 0.0000
38 V A 0.0000
39 I A 0.0000
40 N A -2.2281
41 N A -2.5311
42 N A -2.2238
43 D A -1.6838
44 P A -0.8528
45 V A 0.2955
46 V A -0.2648
47 R A 0.0000
48 S A 0.0000
49 R A -0.0933
50 L A 0.0000
51 L A 0.0000
52 F A 0.0000
53 F A 0.0000
54 N A 0.0000
55 L A 0.0000
56 R A -0.9245
57 I A 0.0000
58 I A 0.0000
59 M A 0.0000
60 S A 0.0000
61 N A -1.9647
62 T A -1.4996
63 A A 0.0000
64 R A -3.1428
65 E A -3.3343
66 G A -2.1955
67 H A -1.7447
68 R A -1.7783
69 A A 0.0000
70 G A 0.0000
71 A A 0.0000
72 L A 0.0000
73 L A 0.0000
74 S A 0.0000
75 L A 0.0000
76 L A 0.0000
77 S A 0.0000
78 L A 0.0000
79 P A 0.0000
80 S A 0.0000
81 A A -1.5315
82 A A -1.2178
83 M A 0.0000
84 S A -1.2023
85 N A -1.3309
86 H A 0.0000
87 I A 0.0000
88 K A -1.4936
89 L A -0.5836
90 A A 0.0000
91 M A -0.5116
92 H A -0.9644
93 S A 0.0000
94 P A -1.1441
95 E A -1.2013
96 A A 0.0000
97 S A -0.8613
98 I A -1.0193
99 D A -1.2866
100 R A -1.5069
101 V A 0.0000
102 E A 0.0000
103 I A 0.0000
104 T A -0.4144
105 G A 0.0000
106 F A -0.7772
107 E A -1.9450
108 N A -2.4268
109 N A -2.5148
110 S A -1.8244
111 F A 0.0000
112 R A -1.2284
113 V A 0.0000
114 I A 0.0832
115 P A -0.3525
116 D A -0.7797
117 A A -0.9005
118 R A -1.9304
119 T A -1.1448
120 S A -0.7924
121 T A -0.8298
122 M A -0.6871
123 S A -1.3254
124 R A -2.1074
125 G A -1.5207
126 E A -1.2948
127 V A 0.0000
128 L A -0.3933
129 A A -0.5961
130 F A 0.0000
131 E A -0.8572
132 A A -0.7996
133 L A 0.0000
134 A A 0.0000
135 E A -2.4640
136 D A -1.9927
137 I A 0.0000
138 P A -1.1542
139 D A -0.9092
140 E A -0.6352
141 L A -0.0430
142 K A -1.8403
143 S A -1.0413
144 T A -0.8495
145 Q A -1.6618
146 N A -2.3752
147 A A -1.6236
148 I A -1.1241
149 D A -2.7632
150 K A -3.0887
151 I A -1.5506
152 T A -1.4836
153 N A -2.7204
154 K A -2.0948
155 V A -0.5682
156 N A -1.4284
157 S A -1.2155
158 V A 0.4596
159 I A 0.8900
160 E A -1.3119
161 G A -0.7044
162 S A 0.2846
163 G A 0.0237
164 Y A 1.1064
165 A A 0.8420
166 A A 0.5911
167 D A -0.7666
168 L A -0.0965
169 K A -2.0313
170 S A -1.5393
171 T A -0.8198
172 Q A -2.2027
173 N A -2.5127
174 A A -1.4889
175 I A -1.0762
176 D A -2.9444
177 K A -3.2212
178 I A -1.8345
179 T A -2.0287
180 N A -2.9585
181 K A -2.7986
182 V A 0.0000
183 N A -2.4860
184 S A -1.5528
185 V A -0.5170
186 I A -0.4072
187 E A -1.4524
188 L A 0.1464
189 T A 0.0000
190 L A 0.0000
191 N A -0.5103
192 H A -1.2489
193 Q A -1.6691
194 T A 0.0000
195 P A 0.0000
196 F A 0.0000
197 V A 0.2572
198 N A -0.4443
199 L A -0.3706
200 Q A -1.5321
201 N A -2.4378
202 D A -2.4859
203 V A 0.0000
204 E A -1.5408
205 D A -2.3038
206 D A -0.8613
207 I A 0.8546
208 F A 0.0000
209 D A -1.3974
210 E A -1.5928
211 T A -1.5881
212 E A -1.7987
213 K A -1.4223
214 F A 0.0000
215 L A 0.0000
216 D A -1.0149
217 V A 0.0000
218 C A 0.0000
219 Y A 0.0000
220 S A 0.0000
221 V A 0.0000
222 L A 0.0000
223 M A 0.0000
224 Q A 0.0000
225 A A 0.0000
226 W A 0.0000
227 I A 0.0000
228 V A 0.0000
229 T A 0.0000
230 C A 0.1178
231 K A 0.0000
232 C A 0.0000
233 M A -0.3134
234 T A -0.4597
235 A A -0.9695
236 P A -1.6432
237 D A -2.5103
238 Q A -2.0145
239 P A -0.8177
240 P A -0.4072
241 V A 0.8401
242 S A -0.1618
243 V A -0.1718
244 A A -0.4664
245 K A -1.6222
246 R A -1.3768
247 M A 0.0000
248 A A -1.5121
249 K A -1.7881
250 Y A 0.0000
251 Q A -1.6042
252 Q A -2.2816
253 Q A -1.9382
254 G A -1.6025
255 R A 0.0000
256 I A 0.0000
257 N A -0.6223
258 A A -0.1286
259 C A 0.3967
260 R A -0.4796
261 Y A 0.0000
262 V A 0.1874
263 L A 0.0000
264 Q A 0.0000
265 P A -0.6230
266 E A 0.0000
267 A A 0.0000
268 Q A -0.8278
269 R A -1.2182
270 L A -0.6611
271 I A 0.0000
272 Q A -1.1811
273 N A -1.6858
274 A A 0.0000
275 I A 0.0000
276 R A -1.7769
277 K A -2.4945
278 S A 0.0000
279 M A -0.7451
280 V A 0.0000
281 V A 0.0000
282 R A 0.0000
283 H A -0.0741
284 F A 0.0000
285 M A 0.0000
286 T A 0.0000
287 Y A 0.2349
288 E A 0.0000
289 L A 0.0000
290 Q A 0.0233
291 L A 0.0000
292 S A -0.0949
293 Q A -0.6146
294 S A -1.0306
295 R A -2.1401
296 S A -0.7030
297 L A 0.0000
298 L A -0.3505
299 A A -0.4608
300 N A -0.8111
301 R A -0.4654
302 Y A 0.0000
303 Y A 0.0000
304 A A 0.0000
305 M A 0.0000
306 V A 0.0000
307 G A -0.2055
308 D A 0.0000
309 I A 0.0000
310 G A 0.0000
311 K A -0.3181
312 Y A 0.1963
313 I A 0.0000
314 E A -0.4509
315 H A -0.5131
316 S A -0.4344
317 G A -0.4025
318 M A 0.0000
319 G A -0.2340
320 G A 0.0000
321 F A 0.0000
322 F A 0.0791
323 L A 0.1204
324 T A 0.0000
325 L A 0.0000
326 K A -0.4908
327 Y A 0.0000
328 G A 0.0000
329 L A 0.0000
330 G A 0.0000
331 T A 0.0000
332 R A -0.4478
333 W A 0.0000
334 P A -0.2389
335 T A 0.0817
336 L A 0.0000
337 A A 0.2586
338 L A 0.6272
339 A A 0.2847
340 A A 0.2122
341 F A 0.0000
342 S A -0.2474
343 G A -0.5000
344 E A -0.6742
345 L A -0.2811
346 Q A -0.4169
347 K A -0.9520
348 L A 0.0000
349 K A -0.1273
350 A A 0.0000
351 L A 0.0000
352 M A 0.0000
353 L A 0.1760
354 H A 0.0000
355 Y A 0.0000
356 Q A -0.3759
357 S A -0.5625
358 L A -0.3764
359 G A -0.2660
360 P A -0.4800
361 M A -0.0123
362 A A 0.0000
363 K A -0.5350
364 Y A 0.0000
365 M A 0.0000
366 A A -0.7633
367 L A 0.0000
368 L A -0.7137
369 E A -1.6646
370 S A -1.0395
371 P A -0.7617
372 K A -0.9233
373 L A -0.2985
374 M A 0.1969
375 D A -0.6328
376 F A 0.0000
377 V A 0.0962
378 P A 0.0000
379 S A -0.4491
380 E A -0.9611
381 Y A 0.0000
382 P A -0.2399
383 L A -0.0385
384 V A 0.0000
385 Y A 0.0000
386 S A 0.0000
387 Y A 0.0000
388 A A 0.0000
389 M A 0.0000
390 G A 0.0000
391 I A 0.0000
392 G A 0.0000
393 T A -0.4751
394 V A -0.5831
395 L A 0.0000
396 D A -0.7749
397 T A -1.1928
398 N A -1.6775
399 M A 0.0000
400 R A -2.4545
401 N A -2.0373
402 Y A -0.7533
403 A A -0.1099
404 Y A 0.4982
405 G A -0.2223
406 R A -0.7974
407 S A -0.5206
408 Y A -0.2352
409 L A -0.1977
410 N A -0.7607
411 P A -1.0032
412 Q A -1.4644
413 Y A -0.6959
414 F A -0.7138
415 Q A -1.5715
416 L A -0.9339
417 G A 0.0000
418 V A -1.3690
419 E A -2.3109
420 T A 0.0000
421 A A 0.0000
422 R A -3.0923
423 K A -3.0622
424 Q A -1.8613
425 Q A -1.6245
426 G A -1.0307
427 A A -0.8852
428 V A -0.6717
429 D A -1.8445
430 N A -3.0327
431 R A -3.5846
432 T A -2.6042
433 A A 0.0000
434 E A -3.8193
435 D A -3.5916
436 L A -2.2373
437 G A -2.1477
438 M A -1.4745
439 T A -0.8307
440 A A -0.5769
441 A A -0.8500
442 D A -1.4601
443 K A -1.4287
444 A A -1.2077
445 D A -2.1429
446 L A 0.0000
447 T A -1.0935
448 A A -1.2304
449 T A 0.0000
450 I A 0.0000
451 S A -1.0245
452 K A -1.4341
453 L A -0.8142
454 S A -0.3140
455 L A 0.9494
456 S A 0.0997
457 Q A -0.3414
458 L A 0.6577
459 P A -1.1863
460 R A -2.5282
461 G A -2.4852
462 R A -2.7281
463 Q A -1.9553
464 P A -0.7544
465 I A 0.6247
466 S A -0.2816
467 D A -0.9224
468 P A -0.0209
469 F A 1.0465
470 A A 0.0745
471 G A -0.1633
472 A A 0.1922
1 S B -0.5872
2 S B -0.7188
3 V B -0.5658
4 L B -0.8797
5 K B -2.1770
6 T B -1.4035
7 F B -1.1436
8 E B -1.9951
9 R B -2.5612
10 F B 0.0000
11 T B -1.3074
12 I B -1.0761
13 Q B -1.4993
14 Q B -1.2256
15 E B -0.7337
16 L B -0.3238
17 Q B -1.8252
18 E B -1.6823
19 Q B -1.9095
20 S B -2.2618
21 E B -2.9760
22 D B -2.7533
23 T B -1.6423
24 P B -0.0941
25 I B 1.0346
26 P B 0.3645
27 L B -0.2714
28 E B -1.7782
29 T B 0.0000
30 I B 0.0000
31 R B -2.4188
32 P B 0.0000
33 T B -1.1770
34 I B 0.0000
35 R B -1.3570
36 V B 0.0000
37 F B 0.0000
38 V B 0.0000
39 I B 0.0000
40 N B -2.2921
41 N B -2.6881
42 N B -2.3965
43 D B -2.1451
44 P B -1.6619
45 V B -0.3647
46 V B -0.4982
47 R B 0.0000
48 S B 0.0000
49 R B -0.1110
50 L B 0.0000
51 L B 0.0000
52 F B 0.0000
53 F B 0.0000
54 N B 0.0000
55 L B 0.0000
56 R B -0.9134
57 I B 0.0000
58 I B 0.0000
59 M B 0.0000
60 S B 0.0000
61 N B -1.9554
62 T B -1.5396
63 A B 0.0000
64 R B -2.4581
65 E B -2.4801
66 G B 0.0000
67 H B -1.3078
68 R B -1.3716
69 A B 0.0000
70 G B 0.0000
71 A B 0.0000
72 L B 0.0000
73 L B 0.0000
74 S B 0.0000
75 L B 0.0000
76 L B 0.0000
77 S B 0.0000
78 L B 0.0000
79 P B -0.2411
80 S B -0.3804
81 A B -0.8312
82 A B -1.0519
83 M B 0.0000
84 S B -1.3804
85 N B -1.7272
86 H B -1.0413
87 I B 0.0000
88 K B -1.7854
89 L B -0.7197
90 A B 0.0000
91 M B -0.4835
92 H B -0.9073
93 S B 0.0000
94 P B -1.0776
95 E B -1.1994
96 A B 0.0000
97 S B -1.1089
98 I B 0.0000
99 D B -1.6534
100 R B -1.7652
101 V B 0.0000
102 E B 0.0000
103 I B 0.0000
104 T B -0.4259
105 G B 0.0000
106 F B -0.7708
107 E B -1.8957
108 N B -2.3880
109 N B -2.4457
110 S B -1.7323
111 F B -1.0614
112 R B -1.1984
113 V B 0.0000
114 I B 0.0483
115 P B -0.4069
116 D B -0.8020
117 A B -0.9043
118 R B -1.9311
119 T B -1.1422
120 S B -0.8180
121 T B -0.8254
122 M B -0.6731
123 S B -1.2643
124 R B -2.0615
125 G B -1.4413
126 E B -1.1145
127 V B 0.0000
128 L B -0.3568
129 A B -0.5544
130 F B 0.0000
131 E B -0.8217
132 A B -0.8024
133 L B 0.0000
134 A B 0.0000
135 E B -2.4806
136 D B -2.0714
137 I B 0.0000
138 P B -1.4450
139 D B -1.2899
140 E B -1.2108
141 L B -0.4011
142 K B -1.7555
143 S B -1.0854
144 T B -1.1780
145 Q B -1.8812
146 N B -2.0434
147 A B -1.5558
148 I B -0.8348
149 D B -2.2739
150 K B -2.9015
151 I B -1.6187
152 T B -1.5955
153 N B -2.5846
154 K B -2.0600
155 V B -0.6951
156 N B -1.4109
157 S B -0.9457
158 V B 0.4889
159 I B 0.8077
160 E B -1.3352
161 G B -0.5459
162 S B 0.2340
163 G B 0.0504
164 Y B 0.9161
165 A B 0.7542
166 A B 0.4013
167 D B -1.1686
168 L B -0.2285
169 K B -2.0910
170 S B -1.6423
171 T B -0.7786
172 Q B -1.9697
173 N B -2.5568
174 A B -1.5061
175 I B -1.2047
176 D B -2.9260
177 K B -3.2782
178 I B -2.0069
179 T B -2.0674
180 N B -3.0663
181 K B -2.7897
182 V B 0.0000
183 N B -2.3671
184 S B -1.6362
185 V B -0.8447
186 I B -0.9392
187 E B -1.6531
188 L B -0.4334
189 T B -0.7189
190 L B 0.0000
191 N B -1.4051
192 H B -1.4931
193 Q B -1.7531
194 T B 0.0000
195 P B 0.0000
196 F B 0.0000
197 V B 0.2583
198 N B -0.2965
199 L B -0.2080
200 Q B -1.1972
201 N B -1.7194
202 D B -2.0679
203 V B 0.0000
204 E B 0.0000
205 D B -2.0469
206 D B -0.6180
207 I B 0.6475
208 F B 0.0000
209 D B -2.4060
210 E B -3.1535
211 T B -2.7036
212 E B -3.1285
213 K B -2.5395
214 F B 0.0000
215 L B -1.2433
216 D B -1.5855
217 V B 0.0000
218 C B 0.0000
219 Y B 0.0000
220 S B 0.0000
221 V B 0.0000
222 L B 0.0000
223 M B 0.0000
224 Q B 0.0000
225 A B 0.0000
226 W B 0.0000
227 I B 0.0000
228 V B 0.0000
229 T B 0.0000
230 C B 0.0017
231 K B 0.0000
232 C B 0.0000
233 M B -0.1638
234 T B -0.5574
235 A B -1.2602
236 P B -1.7928
237 D B -2.6255
238 Q B -1.9416
239 P B -0.8424
240 P B -0.3845
241 V B 0.9211
242 S B -0.0351
243 V B 0.0000
244 A B -0.4840
245 K B -1.6427
246 R B -1.3631
247 M B 0.0000
248 A B -1.6695
249 K B -2.2978
250 Y B 0.0000
251 Q B -2.1857
252 Q B -2.5487
253 Q B -2.5055
254 G B -2.2816
255 R B -2.5034
256 I B 0.0000
257 N B -1.0574
258 A B -0.2951
259 C B 0.5499
260 R B -0.2449
261 Y B 0.0000
262 V B 0.2132
263 L B 0.0000
264 Q B 0.0000
265 P B -0.6605
266 E B 0.0000
267 A B 0.0000
268 Q B -0.6980
269 R B -0.9945
270 L B -0.4980
271 I B 0.0000
272 Q B -0.8646
273 N B -1.2347
274 A B 0.0000
275 I B 0.0000
276 R B -1.2262
277 K B -1.9478
278 S B 0.0000
279 M B 0.0000
280 V B 0.0000
281 V B 0.0000
282 R B 0.0000
283 H B 0.0000
284 F B 0.0000
285 M B 0.0000
286 T B 0.0000
287 Y B 0.1589
288 E B 0.0000
289 L B 0.0000
290 Q B -0.5493
291 L B -0.0963
292 S B -0.6951
293 Q B -1.0212
294 S B -0.8787
295 R B -1.4770
296 S B -0.0691
297 L B 1.5690
298 L B 1.5186
299 A B -0.0976
300 N B -1.5054
301 R B -2.2522
302 Y B 0.0000
303 Y B -0.7115
304 A B -0.7450
305 M B 0.0000
306 V B 0.0000
307 G B -1.1500
308 D B -1.4175
309 I B 0.0000
310 G B 0.0000
311 K B -1.8511
312 Y B -0.5066
313 I B 0.0000
314 E B 0.0000
315 H B -0.7775
316 S B -0.6217
317 G B -0.4699
318 M B 0.0000
319 G B -0.1350
320 G B 0.0000
321 F B 0.0000
322 F B 0.1159
323 L B -0.1261
324 T B 0.0000
325 L B -0.4314
326 K B -1.5904
327 Y B 0.0000
328 G B 0.0000
329 L B -0.7353
330 G B -1.2911
331 T B -1.2579
332 R B -2.3504
333 W B -1.0142
334 P B -1.2219
335 T B 0.0000
336 L B 0.0000
337 A B 0.0000
338 L B 0.0000
339 A B 0.0000
340 A B 0.0000
341 F B 0.0000
342 S B 0.0000
343 G B -0.5654
344 E B 0.0000
345 L B -0.2917
346 Q B -0.7070
347 K B -0.7221
348 L B 0.0000
349 K B -0.8085
350 A B 0.0000
351 L B 0.0000
352 M B 0.0804
353 L B 0.2932
354 H B 0.0000
355 Y B -0.2668
356 Q B -0.8443
357 S B -0.5565
358 L B -0.6112
359 G B -0.5853
360 P B -0.6607
361 M B -0.3556
362 A B 0.0000
363 K B -1.0927
364 Y B 0.0000
365 M B 0.0000
366 A B -0.3384
367 L B 0.0000
368 L B 0.0000
369 E B -0.4814
370 S B 0.0000
371 P B -0.1148
372 K B 0.0000
373 L B 0.2663
374 M B 0.1712
375 D B -0.0755
376 F B 0.0000
377 V B 0.2976
378 P B 0.0000
379 S B -0.5376
380 E B -0.7674
381 Y B 0.0000
382 P B 0.0000
383 L B 0.0000
384 V B 0.0000
385 Y B 0.0000
386 S B 0.0000
387 Y B 0.0000
388 A B 0.0000
389 M B 0.0000
390 G B 0.0000
391 I B 0.0000
392 G B 0.0000
393 T B -0.4795
394 V B -0.2324
395 L B -0.0005
396 D B -0.6097
397 T B -1.3199
398 N B -2.1659
399 M B 0.0000
400 R B -2.6447
401 N B -2.2746
402 Y B -1.0699
403 A B -0.3752
404 Y B -0.0285
405 G B -0.5118
406 R B -0.9162
407 S B -0.7457
408 Y B 0.0000
409 L B -0.2731
410 N B 0.0000
411 P B -0.0109
412 Q B -0.6587
413 Y B 0.0000
414 F B -0.0069
415 Q B -0.5509
416 L B 0.0000
417 G B 0.0000
418 V B -0.7695
419 E B -1.9548
420 T B 0.0000
421 A B 0.0000
422 R B -3.1549
423 K B -3.2447
424 Q B -2.4232
425 Q B -2.2188
426 G B -1.6572
427 A B -1.4151
428 V B -1.6907
429 D B -3.4571
430 N B -3.7189
431 R B -3.9941
432 T B -2.8181
433 A B 0.0000
434 E B -3.6695
435 D B -2.9735
436 L B -0.7345
437 G B -1.3730
438 M B -1.2311
439 T B -0.7578
440 A B -0.5643
441 A B -0.8786
442 D B -1.5385
443 K B -1.4051
444 A B -0.9888
445 D B -1.8715
446 L B -0.6662
447 T B -0.7148
448 A B -0.8369
449 T B -0.3898
450 I B -0.0624
451 S B -0.7787
452 K B -0.8138
453 L B 0.5109
454 S B 0.1050
455 L B 1.2260
456 S B 0.1112
457 Q B -0.5697
458 L B 0.5295
459 P B -1.3835
460 R B -2.6581
461 G B -2.5213
462 R B -2.8301
463 Q B -2.2376
464 P B -0.9245
465 I B 0.6753
466 S B -0.2245
467 D B -0.4655
468 P B 0.3049
469 F B 1.1548
470 A B -0.2054
471 G B -0.7518
472 A B -1.1847
473 N B -2.7439
474 D B -3.3602
475 R B -3.0529
539 L B 1.6805
540 P B 0.9379
541 V B 1.3912
542 P B -0.1484
543 Q B -0.4559
544 C B 0.0987
545 T B -0.1135
546 S B -0.3392
547 G B -0.5531
548 M B -0.7818
549 S B -1.2836
550 S B -1.7855
551 E B -3.1599
552 E B -2.8491
553 F B -1.9369
554 Q B -2.8816
555 H B -3.0787
556 S B -1.7385
557 M B -1.3460
558 N B -2.3199
559 Q B -2.0250
560 Y B -0.6791
561 I B -0.7750
562 R B -2.7762
563 A B -1.7707
564 M B -1.3098
565 H B -2.4005
566 E B -3.3642
567 Q B -2.6657
568 Y B -1.3231
569 R B -3.2878
570 G B -3.2608
571 S B -2.8668
572 Q B -3.5878
573 D B -4.4484
574 D B -4.4686
575 D B -4.0780
576 A B -3.0458
577 N B -3.1906
578 D B -2.9195
579 A B -1.2049
580 T B -0.7761
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.5589 5.359 View CSV PDB
4.5 -0.6161 5.2283 View CSV PDB
5.0 -0.6867 5.0997 View CSV PDB
5.5 -0.7586 4.9769 View CSV PDB
6.0 -0.8186 4.8514 View CSV PDB
6.5 -0.8571 4.7252 View CSV PDB
7.0 -0.8736 4.5992 View CSV PDB
7.5 -0.8744 4.4744 View CSV PDB
8.0 -0.8658 4.3534 View CSV PDB
8.5 -0.8494 4.2432 View CSV PDB
9.0 -0.8235 4.1567 View CSV PDB