Chain sequence(s) |
A: MEDQKKPPTTEQEVKEVKNDDLESIKTPYLDYDNLEDYKMKGYGAQGHQEPKLGMGGGATDAPTPSGGLGRGGGAASTDLSSTDAINRQGVP
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | -0.4182 | |
2 | E | A | -2.6894 | |
3 | D | A | -3.6601 | |
4 | Q | A | -3.7369 | |
5 | K | A | -3.9091 | |
6 | K | A | -3.2831 | |
7 | P | A | -1.7986 | |
8 | P | A | -1.3190 | |
9 | T | A | -1.2833 | |
10 | T | A | -1.7313 | |
11 | E | A | -2.7702 | |
12 | Q | A | -2.7432 | |
13 | E | A | -2.9111 | |
14 | V | A | -0.9127 | |
15 | K | A | -2.1306 | |
16 | E | A | -2.0559 | |
17 | V | A | -0.6149 | |
18 | K | A | -2.6099 | |
19 | N | A | -2.3780 | |
20 | D | A | -3.2956 | |
21 | D | A | -2.7456 | |
22 | L | A | -1.1115 | |
23 | E | A | -1.9667 | |
24 | S | A | -1.4127 | |
25 | I | A | 0.5663 | |
26 | K | A | -1.3408 | |
27 | T | A | -0.0800 | |
28 | P | A | -0.0062 | |
29 | Y | A | 0.9583 | |
30 | L | A | 0.1893 | |
31 | D | A | -1.6079 | |
32 | Y | A | -1.1059 | |
33 | D | A | -2.2567 | |
34 | N | A | -1.9493 | |
35 | L | A | 0.4668 | |
36 | E | A | -1.7146 | |
37 | D | A | -1.4422 | |
38 | Y | A | -0.1907 | |
39 | K | A | -0.5861 | |
40 | M | A | -0.7646 | |
41 | K | A | -1.9848 | |
42 | G | A | -0.8068 | |
43 | Y | A | 0.4702 | |
44 | G | A | -0.7302 | |
45 | A | A | -0.9337 | |
46 | Q | A | -2.0014 | |
47 | G | A | -2.2446 | |
48 | H | A | -2.7030 | |
49 | Q | A | -3.1538 | |
50 | E | A | -3.0768 | |
51 | P | A | -1.8976 | |
52 | K | A | -1.6377 | |
53 | L | A | 0.3676 | |
54 | G | A | 0.1035 | |
55 | M | A | 0.3525 | |
56 | G | A | -0.3907 | |
57 | G | A | -0.7881 | |
58 | G | A | -0.8179 | |
59 | A | A | -0.8316 | |
60 | T | A | -1.1625 | |
61 | D | A | -1.9136 | |
62 | A | A | -1.0002 | |
63 | P | A | -0.7947 | |
64 | T | A | -0.7827 | |
65 | P | A | -0.6443 | |
66 | S | A | -0.5991 | |
67 | G | A | -0.7037 | |
68 | G | A | -0.8253 | |
69 | L | A | 0.2884 | |
70 | G | A | -1.0894 | |
71 | R | A | -2.1784 | |
72 | G | A | -1.6175 | |
73 | G | A | -1.2913 | |
74 | G | A | -1.0134 | |
75 | A | A | -0.4023 | |
76 | A | A | -0.3822 | |
77 | S | A | -0.6172 | |
78 | T | A | -0.6084 | |
79 | D | A | -1.2319 | |
80 | L | A | 0.2713 | |
81 | S | A | -0.5832 | |
82 | S | A | -0.2905 | |
83 | T | A | -0.5412 | |
84 | D | A | -1.7369 | |
85 | A | A | -0.9771 | |
86 | I | A | 0.1854 | |
87 | N | A | -1.9658 | |
88 | R | A | -2.6505 | |
89 | Q | A | -1.9621 | |
90 | G | A | -0.9055 | |
91 | V | A | 0.9165 | |
92 | P | A | 0.3299 |