Chain sequence(s) |
A: MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSEGGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQAGDKRWFKGAKKFVESATSSFSVA
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.0191 | |
2 | A | A | 0.4548 | |
3 | S | A | 0.4150 | |
4 | T | A | 0.4978 | |
5 | A | A | 0.8210 | |
6 | C | A | 1.7669 | |
7 | F | A | 2.5156 | |
8 | L | A | 1.6503 | |
9 | H | A | -0.4379 | |
10 | H | A | -1.1981 | |
11 | H | A | -1.3763 | |
12 | A | A | 0.0255 | |
13 | A | A | 1.0689 | |
14 | I | A | 1.9004 | |
15 | S | A | 0.6714 | |
16 | S | A | -0.0076 | |
17 | P | A | -0.3709 | |
18 | A | A | -0.3828 | |
19 | A | A | -0.6126 | |
20 | G | A | -1.4046 | |
21 | R | A | -2.3238 | |
22 | G | A | -1.5492 | |
23 | S | A | -0.9411 | |
24 | A | A | -0.6399 | |
25 | A | A | -0.8636 | |
26 | Q | A | -1.8610 | |
27 | R | A | -2.0569 | |
28 | Y | A | -0.2508 | |
29 | Q | A | -0.6933 | |
30 | A | A | 0.6097 | |
31 | V | A | 1.8827 | |
32 | S | A | 1.0189 | |
33 | I | A | 1.3299 | |
34 | K | A | -1.1860 | |
35 | P | A | -1.3040 | |
36 | N | A | -1.4228 | |
37 | Q | A | -0.5628 | |
38 | I | A | 1.9246 | |
39 | V | A | 2.2037 | |
40 | C | A | 1.0357 | |
41 | K | A | -1.1391 | |
42 | A | A | -1.5234 | |
43 | Q | A | -2.8510 | |
44 | K | A | -3.6877 | |
45 | Q | A | -3.8243 | |
46 | D | A | -4.3372 | |
47 | D | A | -4.2765 | |
48 | N | A | -3.7446 | |
49 | E | A | -3.1724 | |
50 | A | A | -1.4556 | |
51 | N | A | -0.6715 | |
52 | V | A | 1.3491 | |
53 | L | A | 1.4165 | |
54 | N | A | -0.2117 | |
55 | S | A | -0.1321 | |
56 | G | A | -0.2366 | |
57 | V | A | 0.5648 | |
58 | S | A | -0.6464 | |
59 | R | A | -2.0457 | |
60 | R | A | -1.6435 | |
61 | L | A | 0.5889 | |
62 | A | A | 0.9615 | |
63 | L | A | 2.3752 | |
64 | T | A | 2.4606 | |
65 | V | A | 3.4412 | |
66 | L | A | 3.4491 | |
67 | I | A | 3.0870 | |
68 | G | A | 1.2287 | |
69 | A | A | 0.8283 | |
70 | A | A | 0.7062 | |
71 | A | A | 0.7384 | |
72 | V | A | 1.3127 | |
73 | G | A | 0.0762 | |
74 | S | A | -0.1851 | |
75 | K | A | -0.9346 | |
76 | V | A | 0.2891 | |
77 | S | A | -0.5021 | |
78 | P | A | -1.0518 | |
79 | A | A | -1.1920 | |
80 | D | A | -1.5263 | |
81 | A | A | -0.8007 | |
82 | A | A | -0.1493 | |
83 | Y | A | 0.7332 | |
84 | G | A | -0.1397 | |
85 | E | A | -0.7436 | |
86 | A | A | -0.2564 | |
87 | A | A | 0.0298 | |
88 | N | A | -0.3126 | |
89 | V | A | 1.8645 | |
90 | F | A | 1.9775 | |
91 | G | A | -0.2258 | |
92 | K | A | -2.0834 | |
93 | P | A | -2.3657 | |
94 | K | A | -3.3925 | |
95 | K | A | -3.6271 | |
96 | N | A | -2.7632 | |
97 | T | A | -2.1696 | |
98 | E | A | -1.7449 | |
99 | F | A | -0.3004 | |
100 | M | A | 0.0995 | |
101 | P | A | -0.0247 | |
102 | Y | A | -0.3962 | |
103 | N | A | -1.9548 | |
104 | G | A | -1.7245 | |
105 | D | A | -2.1561 | |
106 | G | A | -1.7628 | |
107 | F | A | 0.0000 | |
108 | K | A | -1.8455 | |
109 | L | A | 0.0000 | |
110 | L | A | 0.4487 | |
111 | V | A | 0.0000 | |
112 | P | A | 0.0000 | |
113 | S | A | -1.1133 | |
114 | K | A | -2.1226 | |
115 | W | A | 0.0000 | |
116 | N | A | -1.7870 | |
117 | P | A | -1.4470 | |
118 | S | A | -2.1433 | |
119 | K | A | -3.1579 | |
120 | E | A | -3.8255 | |
121 | K | A | -3.6489 | |
122 | E | A | -3.2671 | |
123 | F | A | -1.4044 | |
124 | P | A | -0.7689 | |
125 | G | A | -0.4760 | |
126 | Q | A | 0.0000 | |
127 | V | A | 0.5276 | |
128 | L | A | 0.0000 | |
129 | R | A | 0.0000 | |
130 | Y | A | -1.2386 | |
131 | E | A | -1.3770 | |
132 | D | A | -1.0894 | |
133 | N | A | -1.2188 | |
134 | F | A | 0.8180 | |
135 | D | A | 0.1567 | |
136 | A | A | -0.1565 | |
137 | T | A | -0.2078 | |
138 | S | A | 0.0000 | |
139 | N | A | 0.0000 | |
140 | L | A | 0.0000 | |
141 | S | A | 0.0000 | |
142 | V | A | 0.0000 | |
143 | L | A | 0.0000 | |
144 | V | A | -0.1506 | |
145 | Q | A | -0.4556 | |
146 | P | A | -1.4480 | |
147 | T | A | -2.1591 | |
148 | D | A | -3.1246 | |
149 | K | A | -3.1948 | |
150 | K | A | -3.3040 | |
151 | S | A | -2.1598 | |
152 | I | A | 0.0000 | |
153 | T | A | -1.1091 | |
154 | D | A | -2.0171 | |
155 | F | A | -1.4411 | |
156 | G | A | -1.2800 | |
157 | S | A | -1.1517 | |
158 | P | A | -1.2031 | |
159 | E | A | -1.5040 | |
160 | D | A | -2.0909 | |
161 | F | A | 0.0000 | |
162 | L | A | 0.0000 | |
163 | S | A | -0.8865 | |
164 | Q | A | -1.6817 | |
165 | V | A | 0.0000 | |
166 | D | A | -0.9724 | |
167 | Y | A | -0.8357 | |
168 | L | A | 0.0000 | |
169 | L | A | -0.4734 | |
170 | G | A | -1.4401 | |
171 | K | A | -1.7398 | |
172 | Q | A | -0.4287 | |
173 | A | A | 0.3123 | |
174 | Y | A | 1.4121 | |
175 | F | A | 1.7119 | |
176 | G | A | 0.0903 | |
177 | K | A | -1.6583 | |
178 | T | A | -1.7790 | |
179 | D | A | -2.8999 | |
180 | S | A | -1.8525 | |
181 | E | A | -1.8854 | |
182 | G | A | -1.4398 | |
183 | G | A | -1.3398 | |
184 | F | A | -1.4425 | |
185 | D | A | -2.0710 | |
186 | S | A | -2.1630 | |
187 | G | A | -1.2035 | |
188 | V | A | -0.3520 | |
189 | V | A | -0.6666 | |
190 | A | A | -0.8691 | |
191 | S | A | -0.0346 | |
192 | A | A | 0.4366 | |
193 | N | A | 0.1250 | |
194 | V | A | 0.5442 | |
195 | L | A | 0.7161 | |
196 | E | A | -1.0627 | |
197 | S | A | -0.7968 | |
198 | S | A | -0.4656 | |
199 | T | A | 0.2133 | |
200 | P | A | 0.5046 | |
201 | V | A | 1.3231 | |
202 | V | A | 0.4233 | |
203 | D | A | -1.3527 | |
204 | G | A | -0.7774 | |
205 | K | A | -0.4770 | |
206 | Q | A | -0.0044 | |
207 | Y | A | 0.0000 | |
208 | Y | A | 0.0000 | |
209 | S | A | -0.5255 | |
210 | I | A | 0.0000 | |
211 | T | A | -0.2261 | |
212 | V | A | 0.0000 | |
213 | L | A | 0.0000 | |
214 | T | A | -0.8655 | |
215 | R | A | -1.8807 | |
216 | T | A | -1.5431 | |
217 | A | A | -1.5156 | |
218 | D | A | -2.5193 | |
219 | G | A | -2.2030 | |
220 | D | A | -2.3943 | |
221 | E | A | -2.1742 | |
222 | G | A | -2.0860 | |
223 | G | A | 0.0000 | |
224 | K | A | -1.3364 | |
225 | H | A | 0.0000 | |
226 | Q | A | 0.0000 | |
227 | V | A | 0.0000 | |
228 | I | A | 0.0000 | |
229 | A | A | 0.0000 | |
230 | A | A | 0.0000 | |
231 | T | A | 0.0000 | |
232 | V | A | 0.0000 | |
233 | K | A | -2.0945 | |
234 | D | A | -2.9482 | |
235 | G | A | -2.7526 | |
236 | K | A | -2.3388 | |
237 | L | A | 0.0000 | |
238 | Y | A | 0.0000 | |
239 | I | A | 0.0000 | |
240 | C | A | 0.0000 | |
241 | K | A | 0.0000 | |
242 | A | A | 0.0000 | |
243 | Q | A | -0.4958 | |
244 | A | A | 0.0000 | |
245 | G | A | 0.0000 | |
246 | D | A | -1.7963 | |
247 | K | A | -2.0529 | |
248 | R | A | -1.7179 | |
249 | W | A | -1.0878 | |
250 | F | A | 0.0849 | |
251 | K | A | -1.7468 | |
252 | G | A | -1.3060 | |
253 | A | A | -1.4000 | |
254 | K | A | -1.7594 | |
255 | K | A | -1.8150 | |
256 | F | A | -1.0140 | |
257 | V | A | 0.0000 | |
258 | E | A | -1.4591 | |
259 | S | A | -0.7058 | |
260 | A | A | 0.0000 | |
261 | T | A | 0.0000 | |
262 | S | A | -0.2652 | |
263 | S | A | -0.2267 | |
264 | F | A | 0.0000 | |
265 | S | A | 0.0000 | |
266 | V | A | 0.0000 | |
267 | A | A | -0.9269 |