Chain sequence(s) |
A: MNSHQNQTGVQKKGITEKIMEKLPGHHGPTNTGVVHHEKKGMTEKVMEQLPGHHGATGTGGVHHEKKGMTEKVMEQLPGHHGSHQTGTNTTYGTTNTGGVHHEKKSVTEKVMEKLPGHHGSHQTGTNTAYGTNTNVVHHEKKGIAEKIKEQLPGHHGTHKTGTTTSYGNTGVVHHENKSTMDKIKEKLPGGHH
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.3916 | |
2 | N | A | -1.2567 | |
3 | S | A | -1.5180 | |
4 | H | A | -2.5494 | |
5 | Q | A | -2.9075 | |
6 | N | A | -2.8316 | |
7 | Q | A | -2.2192 | |
8 | T | A | -1.1532 | |
9 | G | A | -0.7102 | |
10 | V | A | -0.0208 | |
11 | Q | A | -1.9158 | |
12 | K | A | -2.4758 | |
13 | K | A | -2.3597 | |
14 | G | A | -1.2457 | |
15 | I | A | 0.2454 | |
16 | T | A | -0.5267 | |
17 | E | A | -1.4642 | |
18 | K | A | -1.2609 | |
19 | I | A | 0.3731 | |
20 | M | A | 0.2053 | |
21 | E | A | -1.4516 | |
22 | K | A | -1.2972 | |
23 | L | A | -0.0080 | |
24 | P | A | -0.7147 | |
25 | G | A | -1.1824 | |
26 | H | A | -1.6087 | |
27 | H | A | -1.9552 | |
28 | G | A | -1.6028 | |
29 | P | A | -1.2607 | |
30 | T | A | -1.2267 | |
31 | N | A | -1.3888 | |
32 | T | A | -0.5527 | |
33 | G | A | 0.3903 | |
34 | V | A | 1.8915 | |
35 | V | A | 1.5919 | |
36 | H | A | -0.8787 | |
37 | H | A | -2.3816 | |
38 | E | A | -3.6184 | |
39 | K | A | -3.7870 | |
40 | K | A | -3.0881 | |
41 | G | A | -1.5962 | |
42 | M | A | -0.3484 | |
43 | T | A | -1.1475 | |
44 | E | A | -2.0355 | |
45 | K | A | -1.6379 | |
46 | V | A | 0.4293 | |
47 | M | A | 0.3199 | |
48 | E | A | -1.2558 | |
49 | Q | A | -0.9233 | |
50 | L | A | 0.4004 | |
51 | P | A | -0.5700 | |
52 | G | A | -1.0784 | |
53 | H | A | -1.8730 | |
54 | H | A | -1.8439 | |
55 | G | A | -1.2273 | |
56 | A | A | -0.6990 | |
57 | T | A | -0.4746 | |
58 | G | A | -0.7283 | |
59 | T | A | -0.6382 | |
60 | G | A | -0.5247 | |
61 | G | A | -0.2382 | |
62 | V | A | 0.4442 | |
63 | H | A | -1.4644 | |
64 | H | A | -2.6395 | |
65 | E | A | -3.7559 | |
66 | K | A | -3.8037 | |
67 | K | A | -3.2407 | |
68 | G | A | -1.8035 | |
69 | M | A | -0.5375 | |
70 | T | A | -0.9614 | |
71 | E | A | -1.9546 | |
72 | K | A | -1.6766 | |
73 | V | A | 0.3682 | |
74 | M | A | 0.2716 | |
75 | E | A | -1.3578 | |
76 | Q | A | -0.8273 | |
77 | L | A | 0.4337 | |
78 | P | A | -0.5162 | |
79 | G | A | -0.9526 | |
80 | H | A | -1.8704 | |
81 | H | A | -1.8764 | |
82 | G | A | -1.4846 | |
83 | S | A | -1.4161 | |
84 | H | A | -1.9277 | |
85 | Q | A | -1.9453 | |
86 | T | A | -1.0937 | |
87 | G | A | -1.2268 | |
88 | T | A | -0.9455 | |
89 | N | A | -1.3411 | |
90 | T | A | -0.5041 | |
91 | T | A | 0.1088 | |
92 | Y | A | 0.8948 | |
93 | G | A | -0.0396 | |
94 | T | A | -0.3581 | |
95 | T | A | -0.8841 | |
96 | N | A | -1.5689 | |
97 | T | A | -0.8752 | |
98 | G | A | -0.6667 | |
99 | G | A | -0.3691 | |
100 | V | A | 0.4334 | |
101 | H | A | -1.3986 | |
102 | H | A | -2.5302 | |
103 | E | A | -3.4859 | |
104 | K | A | -3.5407 | |
105 | K | A | -2.8552 | |
106 | S | A | -1.1217 | |
107 | V | A | -0.0031 | |
108 | T | A | -0.5606 | |
109 | E | A | -1.6253 | |
110 | K | A | -1.3888 | |
111 | V | A | 0.3139 | |
112 | M | A | 0.0994 | |
113 | E | A | -1.5601 | |
114 | K | A | -1.4863 | |
115 | L | A | 0.0391 | |
116 | P | A | -0.7180 | |
117 | G | A | -1.1828 | |
118 | H | A | -1.6782 | |
119 | H | A | -2.0165 | |
120 | G | A | -1.7433 | |
121 | S | A | -1.6562 | |
122 | H | A | -1.9738 | |
123 | Q | A | -1.9794 | |
124 | T | A | -1.2990 | |
125 | G | A | -1.3610 | |
126 | T | A | -1.0934 | |
127 | N | A | -1.4599 | |
128 | T | A | -0.4957 | |
129 | A | A | 0.2636 | |
130 | Y | A | 0.9392 | |
131 | G | A | -0.1663 | |
132 | T | A | -0.7721 | |
133 | N | A | -1.4399 | |
134 | T | A | -0.7822 | |
135 | N | A | -0.4471 | |
136 | V | A | 1.4074 | |
137 | V | A | 1.3130 | |
138 | H | A | -0.9723 | |
139 | H | A | -2.2699 | |
140 | E | A | -3.7666 | |
141 | K | A | -3.6380 | |
142 | K | A | -2.9370 | |
143 | G | A | -1.3567 | |
144 | I | A | 0.3688 | |
145 | A | A | -0.4388 | |
146 | E | A | -1.9029 | |
147 | K | A | -1.9677 | |
148 | I | A | -0.6809 | |
149 | K | A | -2.3986 | |
150 | E | A | -2.6018 | |
151 | Q | A | -1.5032 | |
152 | L | A | -0.0343 | |
153 | P | A | -0.5897 | |
154 | G | A | -1.1555 | |
155 | H | A | -1.7103 | |
156 | H | A | -2.0118 | |
157 | G | A | -1.7262 | |
158 | T | A | -1.5954 | |
159 | H | A | -2.1722 | |
160 | K | A | -2.4230 | |
161 | T | A | -1.4316 | |
162 | G | A | -1.1462 | |
163 | T | A | -0.5855 | |
164 | T | A | -0.3260 | |
165 | T | A | -0.0487 | |
166 | S | A | 0.1001 | |
167 | Y | A | 0.6767 | |
168 | G | A | -0.5874 | |
169 | N | A | -1.1608 | |
170 | T | A | -0.1173 | |
171 | G | A | 0.2898 | |
172 | V | A | 1.8180 | |
173 | V | A | 1.4765 | |
174 | H | A | -0.8283 | |
175 | H | A | -2.1816 | |
176 | E | A | -3.4323 | |
177 | N | A | -3.3875 | |
178 | K | A | -2.8320 | |
179 | S | A | -1.6433 | |
180 | T | A | -1.0515 | |
181 | M | A | -0.3792 | |
182 | D | A | -1.9391 | |
183 | K | A | -2.0480 | |
184 | I | A | -0.6008 | |
185 | K | A | -2.4884 | |
186 | E | A | -2.8405 | |
187 | K | A | -2.0536 | |
188 | L | A | -0.3079 | |
189 | P | A | -0.6692 | |
190 | G | A | -0.9592 | |
191 | G | A | -1.2718 | |
192 | H | A | -1.8612 | |
193 | H | A | -1.6343 |