Chain sequence(s) |
A: MAQAMASMAGLRGASQAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.7891 | |
2 | A | A | 0.1282 | |
3 | Q | A | -0.6016 | |
4 | A | A | 0.1059 | |
5 | M | A | 0.8740 | |
6 | A | A | 0.6261 | |
7 | S | A | 0.5748 | |
8 | M | A | 1.1801 | |
9 | A | A | 0.4256 | |
10 | G | A | -0.0257 | |
11 | L | A | 0.4658 | |
12 | R | A | -1.4441 | |
13 | G | A | -1.2521 | |
14 | A | A | -0.7754 | |
15 | S | A | -0.6554 | |
16 | Q | A | -0.6533 | |
17 | A | A | 0.5231 | |
18 | V | A | 1.6695 | |
19 | L | A | 1.2218 | |
20 | E | A | -0.8496 | |
21 | G | A | -0.6118 | |
22 | S | A | 0.0095 | |
23 | L | A | 1.2673 | |
24 | Q | A | 0.3050 | |
25 | I | A | 1.5947 | |
26 | S | A | 0.2134 | |
27 | G | A | -0.9885 | |
28 | S | A | -1.1795 | |
29 | N | A | -2.0527 | |
30 | R | A | -1.9280 | |
31 | L | A | 0.0443 | |
32 | S | A | -0.3656 | |
33 | G | A | -0.5138 | |
34 | P | A | -0.4447 | |
35 | T | A | -0.6330 | |
36 | T | A | -0.6119 | |
37 | S | A | -0.7550 | |
38 | R | A | -0.8852 | |
39 | V | A | 1.2605 | |
40 | A | A | 0.9105 | |
41 | V | A | 1.6089 | |
42 | P | A | 0.2237 | |
43 | K | A | -0.8119 | |
44 | M | A | 0.3795 | |
45 | G | A | 0.1408 | |
46 | L | A | 1.1051 | |
47 | N | A | -0.0485 | |
48 | I | A | 0.7367 | |
49 | R | A | -1.4747 | |
50 | A | A | -1.1795 | |
51 | Q | A | -1.6238 | |
52 | Q | A | -1.1443 | |
53 | V | A | 0.8115 | |
54 | S | A | -0.0888 | |
55 | A | A | -0.8958 | |
56 | E | A | -2.2194 | |
57 | A | A | -1.7608 | |
58 | E | A | -2.2705 | |
59 | T | A | -1.6173 | |
60 | S | A | -1.9327 | |
61 | R | A | -2.3191 | |
62 | R | A | -2.1597 | |
63 | A | A | -0.4694 | |
64 | M | A | 1.2870 | |
65 | L | A | 1.9656 | |
66 | G | A | 1.7132 | |
67 | F | A | 3.3018 | |
68 | V | A | 3.0063 | |
69 | A | A | 1.4838 | |
70 | A | A | 0.9051 | |
71 | G | A | 0.5665 | |
72 | L | A | 1.2433 | |
73 | A | A | 0.4582 | |
74 | S | A | 0.1230 | |
75 | G | A | 0.3007 | |
76 | S | A | 0.7667 | |
77 | F | A | 2.0079 | |
78 | V | A | 2.0587 | |
79 | K | A | 0.5649 | |
80 | A | A | 1.4007 | |
81 | V | A | 2.0715 | |
82 | L | A | 1.7300 | |
83 | A | A | 0.2522 | |
84 | E | A | -1.6091 | |
85 | A | A | -1.2742 | |
86 | R | A | -1.6581 | |
87 | P | A | 0.3876 | |
88 | I | A | 2.7474 | |
89 | V | A | 3.1466 | |
90 | V | A | 2.9119 | |
91 | G | A | 1.0438 | |
92 | P | A | -0.0246 | |
93 | P | A | -0.1599 | |
94 | P | A | -0.2797 | |
95 | P | A | 0.1511 | |
96 | L | A | 0.8133 | |
97 | S | A | 0.0976 | |
98 | G | A | -0.8187 | |
99 | G | A | -0.0849 | |
100 | L | A | 0.8184 | |
101 | P | A | -0.2431 | |
102 | G | A | -1.0648 | |
103 | T | A | -1.2437 | |
104 | E | A | -2.4901 | |
105 | N | A | -2.5997 | |
106 | S | A | -1.7097 | |
107 | D | A | -1.9146 | |
108 | Q | A | -1.8744 | |
109 | A | A | -1.2589 | |
110 | R | A | -2.4195 | |
111 | D | A | -2.0781 | |
112 | G | A | -1.1105 | |
113 | T | A | -0.3992 | |
114 | L | A | 0.1945 | |
115 | P | A | 0.0920 | |
116 | Y | A | 0.8654 | |
117 | T | A | -0.3572 | |
118 | K | A | -1.6898 | |
119 | D | A | -1.7281 | |
120 | R | A | 0.0000 | |
121 | F | A | 1.8962 | |
122 | Y | A | 1.4037 | |
123 | L | A | 0.8406 | |
124 | Q | A | -0.3203 | |
125 | P | A | -0.6499 | |
126 | L | A | -0.6070 | |
127 | P | A | -0.7184 | |
128 | P | A | -1.1784 | |
129 | T | A | -1.2517 | |
130 | E | A | -2.2178 | |
131 | A | A | 0.0000 | |
132 | A | A | 0.0000 | |
133 | Q | A | -1.7877 | |
134 | R | A | -0.9023 | |
135 | A | A | 0.0000 | |
136 | K | A | -0.6557 | |
137 | V | A | 0.9251 | |
138 | S | A | 0.0000 | |
139 | A | A | 0.0000 | |
140 | S | A | -0.0796 | |
141 | E | A | -0.5276 | |
142 | I | A | 0.0000 | |
143 | L | A | -0.4793 | |
144 | N | A | -1.7779 | |
145 | V | A | 0.0000 | |
146 | K | A | -2.9060 | |
147 | Q | A | -2.7529 | |
148 | F | A | -2.4133 | |
149 | I | A | 0.0000 | |
150 | D | A | -3.8855 | |
151 | R | A | -3.7514 | |
152 | K | A | -3.6427 | |
153 | A | A | -2.0531 | |
154 | W | A | 0.0000 | |
155 | P | A | -1.4054 | |
156 | S | A | -1.3145 | |
157 | L | A | 0.0000 | |
158 | Q | A | -1.8397 | |
159 | N | A | -1.7936 | |
160 | D | A | -1.3280 | |
161 | L | A | 0.0000 | |
162 | R | A | -1.6703 | |
163 | L | A | -0.1256 | |
164 | R | A | -0.4550 | |
165 | A | A | 0.0000 | |
166 | S | A | -0.2593 | |
167 | Y | A | 0.4766 | |
168 | L | A | 0.0000 | |
169 | R | A | -1.1855 | |
170 | Y | A | -0.3909 | |
171 | D | A | 0.0000 | |
172 | L | A | 0.0000 | |
173 | K | A | -2.1265 | |
174 | T | A | -1.0539 | |
175 | V | A | 0.0000 | |
176 | I | A | 0.0000 | |
177 | S | A | -1.3732 | |
178 | A | A | -1.0953 | |
179 | K | A | -2.1137 | |
180 | P | A | -2.6764 | |
181 | K | A | -3.8737 | |
182 | D | A | -4.1108 | |
183 | E | A | -4.1035 | |
184 | K | A | -4.3638 | |
185 | K | A | -4.3503 | |
186 | S | A | -3.3028 | |
187 | L | A | 0.0000 | |
188 | Q | A | -3.5213 | |
189 | E | A | -3.2701 | |
190 | L | A | -2.1288 | |
191 | T | A | -2.1074 | |
192 | S | A | -1.9128 | |
193 | K | A | -2.3017 | |
194 | L | A | 0.0000 | |
195 | F | A | 0.0000 | |
196 | S | A | -1.5049 | |
197 | S | A | 0.0000 | |
198 | I | A | 0.0000 | |
199 | D | A | -2.6372 | |
200 | N | A | -2.3801 | |
201 | L | A | 0.0000 | |
202 | D | A | -2.3403 | |
203 | H | A | -2.2972 | |
204 | A | A | 0.0000 | |
205 | A | A | 0.0000 | |
206 | K | A | -2.0079 | |
207 | I | A | -0.3478 | |
208 | K | A | -2.1025 | |
209 | S | A | -1.5112 | |
210 | P | A | -1.9109 | |
211 | T | A | -1.6545 | |
212 | E | A | -2.1482 | |
213 | A | A | 0.0000 | |
214 | E | A | -3.3616 | |
215 | K | A | -3.0454 | |
216 | Y | A | -2.1297 | |
217 | Y | A | -1.5675 | |
218 | G | A | -1.5985 | |
219 | Q | A | -1.5318 | |
220 | T | A | 0.0000 | |
221 | V | A | -0.2495 | |
222 | S | A | -0.8038 | |
223 | N | A | 0.0000 | |
224 | I | A | 0.0000 | |
225 | N | A | -1.6165 | |
226 | E | A | -1.3807 | |
227 | V | A | 0.0000 | |
228 | L | A | -0.9675 | |
229 | A | A | -1.1720 | |
230 | K | A | -1.9740 | |
231 | L | A | -1.2197 | |
232 | G | A | -0.9803 |