Project name: f784449f4ede700

Status: done

Started: 2025-03-28 05:12:46
Chain sequence(s) A: EVQLLESGGGEVQPGGSLRLSCAASGLTFPNYGMGWFRQAPGKEREFVSAIYWSGGTVYYAESVKGRFTISRDNAKNTLYLQMSSLRAEDTAVYYCAVTIRGAATQTWKYDYWGQGTLVTVKPGGGGSEVQLLESGGGEVQPGGSLRLSCAASGLTFPNYGMGWFRQAPGKEREFVSAIYWSGGTVYYAESVKGRFTISRDNAKNTLYLQMSSLRAEDTAVYYCAVTIRGAATQTWKYDYWGQGTLVTVKPEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYQSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVCTLPPSRDELTKNQVSLSCAVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLVSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSDLRQGMFAQLVAQNVLLIDGPLSWYSDPGLAGVSLTGGLSYKEDTKELVVAKSGVYYVFFQLELRRVVAGEGSGSVSLALYLQPLRSASGAAALALTVDLPPASSEARNSAFGFQGRLLHLSAGQRLGVHLHTEARARHAWQLTQGATVLGLCRVTPEGGGGSDLRQGMFAQLVAQNVLLIDGPLSWYSDPGLAGVSLTGGLSYKEDTKELVVAKSGVYYVFFQLELRRVVAGEGSGSVSLALYLQPLRSASGAAALALTVDLPPASSEARNSAFGFQGRLLHLSAGQRLGVHLHTEARARHAWQLTQGATVLGLFRVTPE
B: EVQLLESGGGEVQPGGSLRLSCAASGLTFPNYGMGWFRQAPGKEREFVSAIYWSGGTVYYAESVKGRFTISRDNAKNTLYLQMSSLRAEDTAVYYCAVTIRGAATQTWKYDYWGQGTLVTVKPEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYQSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPCRDELTKNQVSLWCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSGGGGSDLRQGMFAQLVAQNVLLIDGPLSWYSDPGLAGVSLTGGLSYKEDTKELVVAKSGVYYVFFQLELRRVVAGEGSGSVSLALYLQPLRSASGAAALALTVDLPPASSEARNSAFGFQGRLLHLSAGQRLGVHLHTEARARHAWQLTQGATVLGLFRCTPE
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:07)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:07)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:15:11)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/f784449f4ede700/tmp/folded.pdb                (00:15:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:22:56)
Show buried residues

Minimal score value
-3.9086
Maximal score value
1.5525
Average score
-0.7775
Total score value
-1023.2473

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 E A -2.0499
2 V A -1.2140
3 Q A -1.3559
4 L A 0.0000
5 L A 0.4428
6 E A 0.0000
7 S A -0.3857
8 G A -0.8657
9 G A -0.6223
10 G A -1.0169
11 E A -2.2409
12 V A -1.9859
13 Q A -2.5298
14 P A -2.2976
15 G A -1.2964
16 G A -1.1645
17 S A -1.1210
18 L A -1.4328
19 R A -2.2169
20 L A 0.0000
21 S A -0.5477
22 C A 0.0000
23 A A -0.3143
24 A A 0.0000
25 S A -0.9372
26 G A -1.2710
27 L A -0.6808
28 T A -0.5781
29 F A 0.0000
30 P A -1.0530
31 N A -1.0170
32 Y A -0.3143
33 G A 0.0000
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A 0.1760
38 R A 0.0000
39 Q A -1.3093
40 A A -1.3344
41 P A -1.1044
42 G A -1.4418
43 K A -2.8022
44 E A -3.1747
45 R A -2.4245
46 E A -1.2324
47 F A 0.0563
48 V A 0.0000
49 S A 0.0000
50 A A 0.0000
51 I A 0.0000
52 Y A 0.4938
53 W A 0.0458
54 S A -0.2760
55 G A -0.2765
56 G A -0.2897
57 T A 0.3826
58 V A 1.0756
59 Y A 0.9436
60 Y A -0.1993
61 A A -0.9640
62 E A -2.2751
63 S A -1.6057
64 V A 0.0000
65 K A -2.4572
66 G A -1.6492
67 R A -1.1565
68 F A 0.0000
69 T A -0.6836
70 I A 0.0000
71 S A -0.3600
72 R A -0.8295
73 D A -1.4452
74 N A -1.7156
75 A A -1.3588
76 K A -2.2299
77 N A -1.6349
78 T A -0.9845
79 L A 0.0000
80 Y A -0.5978
81 L A 0.0000
82 Q A -1.4307
83 M A 0.0000
84 S A -1.0493
85 S A -1.0485
86 L A 0.0000
87 R A -2.5828
88 A A -2.1903
89 E A -2.4521
90 D A 0.0000
91 T A -1.0654
92 A A 0.0000
93 V A 0.6266
94 Y A 0.0000
95 Y A 0.2273
96 C A 0.0000
97 A A 0.0000
98 V A 0.0000
99 T A 0.0000
100 I A -0.8019
101 R A -2.1686
102 G A -1.5966
103 A A -1.2602
104 A A -0.5995
105 T A -0.8503
106 Q A -1.4469
107 T A -1.0328
108 W A -1.3385
109 K A -2.1663
110 Y A -0.8874
111 D A -0.6646
112 Y A 0.1852
113 W A 0.3710
114 G A -0.1578
115 Q A -1.0297
116 G A 0.0000
117 T A 0.4982
118 L A 1.1226
119 V A 0.0000
120 T A -1.3925
121 V A 0.0000
122 K A -3.0524
123 P A -2.0162
124 G A -1.6202
125 G A -1.4022
126 G A -1.4060
127 G A -1.5566
128 S A -1.7034
129 E A -2.3959
130 V A -1.2189
131 Q A -1.3281
132 L A 0.0000
133 L A 0.7988
134 E A 0.1416
135 S A -0.3635
136 G A -0.8565
137 G A -0.6220
138 G A -0.9749
139 E A -2.2061
140 V A -1.9489
141 Q A -2.7497
142 P A -2.3789
143 G A -1.2460
144 G A -1.1398
145 S A -1.1017
146 L A -1.3099
147 R A -2.2069
148 L A 0.0000
149 S A -0.5121
150 C A 0.0000
151 A A -0.1908
152 A A 0.0000
153 S A -0.8395
154 G A -1.2651
155 L A -0.6365
156 T A -0.6181
157 F A 0.0000
158 P A -0.9456
159 N A -1.1382
160 Y A -0.4404
161 G A 0.0000
162 M A 0.0000
163 G A 0.0000
164 W A 0.0000
165 F A 0.2410
166 R A 0.0000
167 Q A -1.3475
168 A A -1.4500
169 P A -1.2834
170 G A -1.9412
171 K A -2.9683
172 E A -3.1710
173 R A -2.1741
174 E A -1.0695
175 F A 0.1856
176 V A 0.0000
177 S A 0.0000
178 A A 0.0000
179 I A 0.0000
180 Y A 0.4388
181 W A -0.1106
182 S A -0.3484
183 G A -0.3381
184 G A -0.3127
185 T A 0.3763
186 V A 1.1015
187 Y A 0.9334
188 Y A -0.2001
189 A A -0.9572
190 E A -2.2747
191 S A -1.6177
192 V A 0.0000
193 K A -2.4746
194 G A -1.6441
195 R A -1.1395
196 F A 0.0000
197 T A -0.6798
198 I A 0.0000
199 S A -0.3563
200 R A -0.8549
201 D A -1.4477
202 N A -1.7186
203 A A -1.3495
204 K A -2.2077
205 N A -1.6225
206 T A -0.9228
207 L A 0.0000
208 Y A -0.6106
209 L A 0.0000
210 Q A -1.4091
211 M A 0.0000
212 S A -1.0299
213 S A -0.9904
214 L A 0.0000
215 R A -2.4872
216 A A -2.0782
217 E A -2.2517
218 D A 0.0000
219 T A -1.0082
220 A A 0.0000
221 V A 0.6091
222 Y A 0.0000
223 Y A 0.2048
224 C A 0.0000
225 A A 0.0000
226 V A 0.0000
227 T A 0.0000
228 I A -0.7408
229 R A -2.0707
230 G A -1.4995
231 A A -1.1430
232 A A -0.5776
233 T A -0.8219
234 Q A -1.3695
235 T A -1.0030
236 W A -1.2398
237 K A -2.0499
238 Y A 0.0000
239 D A -0.7914
240 Y A 0.1189
241 W A -0.0170
242 G A -0.2415
243 Q A -1.0433
244 G A -0.0149
245 T A 0.5068
246 L A 1.1670
247 V A 0.0000
248 T A -1.3155
249 V A 0.0000
250 K A -3.1300
251 P A -2.6727
252 E A -3.1549
253 P A -2.2446
254 K A -2.8263
255 S A -1.6896
256 C A -1.0691
257 D A -2.6587
258 K A -2.9108
259 T A -1.7421
260 H A -1.6723
261 T A -0.7462
262 C A -0.2880
263 P A -0.2965
264 P A -0.1979
265 C A 0.0321
266 P A -0.4121
267 A A -0.5059
268 P A -1.0857
269 E A -1.3366
270 L A 0.0010
271 L A 0.8299
272 G A -0.0086
273 G A 0.0000
274 P A 0.0000
275 S A 0.1601
276 V A 0.0000
277 F A 1.2369
278 L A 0.9217
279 F A 1.1734
280 P A -0.1153
281 P A 0.0000
282 K A -2.0448
283 P A -1.3294
284 K A -1.1621
285 D A -1.2978
286 T A 0.0000
287 L A 0.0000
288 M A 0.3050
289 I A 1.4684
290 S A 0.0501
291 R A -1.1456
292 T A -0.7163
293 P A 0.0000
294 E A -1.0317
295 V A 0.0000
296 T A 0.2206
297 C A 0.0000
298 V A 0.0000
299 V A 0.0000
300 V A -0.7330
301 D A -1.4352
302 V A 0.0000
303 S A -2.0824
304 H A -2.2317
305 E A -2.7850
306 D A -2.4853
307 P A -2.4942
308 E A -3.1207
309 V A -2.0665
310 K A -2.2207
311 F A -1.1454
312 N A -1.1080
313 W A 0.0000
314 Y A -0.6087
315 V A -0.9173
316 D A -2.1971
317 G A -0.8977
318 V A 0.6061
319 E A -0.5616
320 V A -0.5172
321 H A -1.8559
322 N A -2.1680
323 A A -1.8556
324 K A -2.3950
325 T A -1.8997
326 K A -2.2896
327 P A -2.5048
328 R A -3.9086
329 E A -3.8771
330 E A -3.5316
331 Q A -1.8656
332 Y A -0.0380
333 Q A -1.1823
334 S A -1.1547
335 T A -2.0402
336 Y A 0.0000
337 R A -2.5017
338 V A 0.0000
339 V A 0.0000
340 S A 0.0000
341 V A 0.0000
342 L A 0.0000
343 T A -0.6140
344 V A 0.0000
345 L A 0.9605
346 H A 0.0000
347 Q A -0.8942
348 D A -1.2628
349 W A 0.0000
350 L A -1.0138
351 N A -2.1145
352 G A -2.0486
353 K A -2.1672
354 E A -2.3303
355 Y A 0.0000
356 K A -1.6424
357 C A 0.0000
358 K A -1.4766
359 V A 0.0000
360 S A -1.4508
361 N A 0.0000
362 K A -2.5534
363 A A -1.3234
364 L A -0.4548
365 P A -0.5813
366 A A -0.4249
367 P A -0.8839
368 I A -0.5748
369 E A -1.9489
370 K A -1.2191
371 T A -1.0551
372 I A -0.2778
373 S A -1.2170
374 K A -1.2959
375 A A -1.1619
376 K A -2.3239
377 G A -2.0146
378 Q A -2.0566
379 P A -1.9630
380 R A -2.5606
381 E A -2.8111
382 P A 0.0000
383 Q A -1.7776
384 V A 0.0000
385 C A 0.0000
386 T A -0.7177
387 L A 0.0000
388 P A -0.2409
389 P A -0.8049
390 S A 0.0000
391 R A -2.8668
392 D A -2.8435
393 E A 0.0000
394 L A -1.6142
395 T A -1.4272
396 K A -2.0744
397 N A -2.3055
398 Q A -2.0673
399 V A 0.0000
400 S A 0.0000
401 L A 0.0000
402 S A 0.0000
403 C A 0.0000
404 A A 0.0000
405 V A 0.0000
406 K A -0.7030
407 G A -1.2312
408 F A 0.0000
409 Y A -1.2087
410 P A 0.0000
411 S A -0.1901
412 D A -1.0169
413 I A -0.5574
414 A A 0.0000
415 V A 0.0000
416 E A -1.1331
417 W A 0.0000
418 E A -1.7713
419 S A 0.0000
420 N A -1.8185
421 G A -1.7462
422 Q A -2.3064
423 P A -1.9586
424 E A -1.8279
425 N A -2.0088
426 N A -1.3085
427 Y A -0.8980
428 K A -0.6848
429 T A -0.3825
430 T A 0.0000
431 P A -0.0220
432 P A 0.2312
433 V A 0.6794
434 L A 1.0445
435 D A -0.3829
436 S A -1.0810
437 D A -1.8725
438 G A -0.8408
439 S A 0.0000
440 F A 0.1746
441 F A 0.0000
442 L A 0.0000
443 V A 0.0000
444 S A 0.0000
445 K A 0.0000
446 L A 0.0000
447 T A -0.8343
448 V A 0.0000
449 D A -2.4249
450 K A -2.4292
451 S A -2.1514
452 R A -1.8734
453 W A 0.0000
454 Q A -2.2210
455 Q A -1.9943
456 G A -1.1761
457 N A -0.6116
458 V A 0.3256
459 F A 0.0000
460 S A -0.7631
461 C A 0.0000
462 S A 0.0000
463 V A 0.0000
464 M A 0.0000
465 H A 0.0000
466 E A -1.1215
467 A A -1.6221
468 L A -1.5022
469 H A -1.7398
470 N A -1.6581
471 H A -1.1521
472 Y A -0.2947
473 T A -0.6747
474 Q A -1.0388
475 K A -1.1067
476 S A -0.6219
477 L A 0.0000
478 S A 0.0000
479 L A -0.7262
480 S A -1.4060
481 D A -2.1231
482 L A -1.4008
483 R A -2.3087
484 Q A -2.5913
485 G A -1.6200
486 M A 0.0000
487 F A 0.0000
488 A A 0.0000
489 Q A 0.0000
490 L A 0.0000
491 V A 0.0000
492 A A 0.0000
493 Q A -0.7092
494 N A -0.1059
495 V A 0.2218
496 L A 0.8454
497 L A 0.0000
498 I A 1.2477
499 D A -0.8774
500 G A -0.5265
501 P A -0.5179
502 L A 0.0000
503 S A -1.0725
504 W A 0.0000
505 Y A -0.2753
506 S A -0.9736
507 D A -1.5951
508 P A -0.9409
509 G A -0.7169
510 L A 0.0750
511 A A 0.0397
512 G A -0.3015
513 V A 0.0000
514 S A -0.3359
515 L A -0.2130
516 T A -0.4065
517 G A -1.5322
518 G A -0.9386
519 L A 0.0000
520 S A -0.5628
521 Y A -1.3450
522 K A -2.5952
523 E A -3.2479
524 D A -3.1209
525 T A -2.0287
526 K A -2.0794
527 E A 0.0000
528 L A 0.0000
529 V A -0.5594
530 V A 0.0000
531 A A -1.1497
532 K A -1.9729
533 S A -1.0922
534 G A -0.5358
535 V A 0.0000
536 Y A 0.0000
537 Y A 0.0000
538 V A 0.0000
539 F A 0.0000
540 F A 0.0000
541 Q A 0.0000
542 L A 0.0000
543 E A -0.7207
544 L A 0.0000
545 R A -2.0231
546 R A 0.0000
547 V A -0.0554
548 V A -0.2137
549 A A -0.4673
550 G A -1.4444
551 E A -2.1190
552 G A 0.0000
553 S A -1.7674
554 G A -1.4141
555 S A -1.3114
556 V A 0.0000
557 S A -0.8765
558 L A 0.0000
559 A A -0.2258
560 L A 0.0000
561 Y A -0.1199
562 L A -0.1580
563 Q A -0.5664
564 P A -0.3897
565 L A 0.3323
566 R A -1.2942
567 S A -0.6653
568 A A -0.4469
569 S A -0.6156
570 G A -0.5285
571 A A -0.3351
572 A A -0.1842
573 A A -0.1103
574 L A 0.0000
575 A A -0.0008
576 L A 0.0000
577 T A -0.1159
578 V A 0.0000
579 D A -0.6439
580 L A 0.0000
581 P A 0.0000
582 P A -1.5474
583 A A -1.6180
584 S A -1.5726
585 S A -1.6916
586 E A -2.3886
587 A A -1.7974
588 R A -2.1516
589 N A -2.2810
590 S A -1.5108
591 A A 0.0000
592 F A 0.1815
593 G A 0.0000
594 F A 0.0000
595 Q A 0.0000
596 G A 0.0000
597 R A -0.2956
598 L A 0.0000
599 L A -0.3290
600 H A -0.7566
601 L A 0.0000
602 S A -0.8273
603 A A -0.9709
604 G A -0.8891
605 Q A 0.0000
606 R A -0.6324
607 L A 0.0000
608 G A 0.0000
609 V A 0.0000
610 H A -0.6586
611 L A 0.0000
612 H A -1.6536
613 T A 0.0000
614 E A -3.0139
615 A A -2.4399
616 R A -3.1771
617 A A 0.0000
618 R A -2.2124
619 H A -1.7856
620 A A 0.0000
621 W A 0.0000
622 Q A -0.5192
623 L A 0.0000
624 T A -1.0938
625 Q A -1.5890
626 G A -0.8731
627 A A -0.5559
628 T A 0.0000
629 V A 0.0000
630 L A 0.0000
631 G A 0.0000
632 L A 0.0000
633 C A -0.1064
634 R A -0.8453
635 V A -0.5462
636 T A -1.0202
637 P A -2.0838
638 E A -2.8651
639 G A -2.2409
640 G A -1.9410
641 G A -1.7037
642 G A -1.2058
643 S A -1.1135
644 D A -1.7389
645 L A -0.7121
646 R A -2.4255
647 Q A -2.7839
648 G A 0.0000
649 M A 0.0000
650 F A 0.0000
651 A A 0.0000
652 Q A 0.0000
653 L A 0.0000
654 V A 0.0000
655 A A 0.0000
656 Q A -0.6356
657 N A -0.0022
658 V A 0.5480
659 L A 1.3061
660 L A 0.0000
661 I A 1.2535
662 D A -0.8356
663 G A -0.5282
664 P A -0.5202
665 L A 0.0000
666 S A -1.1243
667 W A 0.0000
668 Y A -0.3710
669 S A -1.0662
670 D A -1.6755
671 P A -1.0274
672 G A -0.8284
673 L A -0.1471
674 A A -0.1133
675 G A -0.3831
676 V A 0.0000
677 S A -0.3267
678 L A -0.4564
679 T A -0.7660
680 G A -1.7596
681 G A -1.1434
682 L A 0.0000
683 S A -0.6770
684 Y A -1.5574
685 K A -2.9160
686 E A -3.3986
687 D A -3.2152
688 T A -2.2015
689 K A -2.2485
690 E A -1.6884
691 L A 0.0000
692 V A -0.7266
693 V A 0.0000
694 A A -1.0606
695 K A -1.8494
696 S A -1.2457
697 G A -0.9032
698 V A 0.0000
699 Y A 0.0000
700 Y A 0.0000
701 V A 0.0000
702 F A 0.0000
703 F A 0.0000
704 Q A 0.0000
705 L A 0.0000
706 E A -0.3941
707 L A 0.0000
708 R A -0.7015
709 R A 0.0000
710 V A 1.2156
711 V A 0.6135
712 A A 0.0544
713 G A -0.9474
714 E A -1.1429
715 G A 0.0000
716 S A -1.5606
717 G A -1.4096
718 S A -1.2998
719 V A 0.0000
720 S A -0.8574
721 L A 0.0000
722 A A -0.1815
723 L A 0.0000
724 Y A 0.1658
725 L A -0.4010
726 Q A -1.0182
727 P A -0.8549
728 L A -0.5064
729 R A -1.7277
730 S A -1.0158
731 A A -0.5110
732 S A -0.5694
733 G A -0.5400
734 A A -0.2233
735 A A 0.1308
736 A A 0.0798
737 L A 0.0000
738 A A 0.0142
739 L A 0.0000
740 T A -0.1372
741 V A 0.0000
742 D A -0.6884
743 L A 0.0000
744 P A 0.0000
745 P A -1.3094
746 A A -1.2079
747 S A -1.2391
748 S A -1.5675
749 E A -2.3330
750 A A -1.6488
751 R A -1.7264
752 N A -1.5794
753 S A -0.8063
754 A A -0.3653
755 F A 0.3762
756 G A 0.0000
757 F A 0.0000
758 Q A 0.0000
759 G A 0.0000
760 R A -0.3169
761 L A 0.0000
762 L A -0.4811
763 H A -1.0704
764 L A 0.0000
765 S A -0.8074
766 A A -0.8677
767 G A -0.7752
768 Q A 0.0000
769 R A -1.1633
770 L A 0.0000
771 G A 0.0000
772 V A 0.0000
773 H A -0.6106
774 L A 0.0000
775 H A -1.6251
776 T A 0.0000
777 E A -2.8931
778 A A -2.2836
779 R A -3.0286
780 A A 0.0000
781 R A -2.1822
782 H A -1.2596
783 A A 0.0000
784 W A 0.0000
785 Q A 0.2035
786 L A 0.0000
787 T A -0.7502
788 Q A -1.4631
789 G A -1.0707
790 A A -0.5857
791 T A 0.0000
792 V A 0.0000
793 L A 0.0000
794 G A 0.0000
795 L A 0.0000
796 F A 0.0000
797 R A -0.9073
798 V A 0.0000
799 T A -0.9589
800 P A -1.4725
801 E A -1.5162
1 E B -1.9371
2 V B -1.0004
3 Q B -0.9366
4 L B 0.0000
5 L B 0.6363
6 E B 0.1542
7 S B -0.4411
8 G B -0.9035
9 G B -0.6420
10 G B -1.0091
11 E B -2.2183
12 V B -1.9815
13 Q B -2.6976
14 P B -2.4704
15 G B -1.2806
16 G B -1.1619
17 S B -1.0956
18 L B -1.2996
19 R B -2.2019
20 L B 0.0000
21 S B -0.5404
22 C B 0.0000
23 A B -0.2384
24 A B 0.0000
25 S B -0.7575
26 G B -1.1378
27 L B -0.6197
28 T B -0.5629
29 F B 0.0000
30 P B -0.8356
31 N B -1.0360
32 Y B -0.3844
33 G B 0.0000
34 M B 0.0000
35 G B 0.0000
36 W B 0.0000
37 F B 0.0009
38 R B 0.0000
39 Q B -1.7319
40 A B -1.6922
41 P B -1.2684
42 G B -1.9763
43 K B -3.3881
44 E B -3.6117
45 R B -2.7948
46 E B -1.7788
47 F B -0.1527
48 V B 0.0000
49 S B 0.0000
50 A B 0.0000
51 I B 0.0000
52 Y B 0.5244
53 W B 0.0825
54 S B -0.2542
55 G B -0.2582
56 G B -0.2903
57 T B 0.4486
58 V B 1.2095
59 Y B 1.1045
60 Y B -0.1193
61 A B -0.9932
62 E B -2.2731
63 S B -1.6731
64 V B 0.0000
65 K B -2.4369
66 G B -1.6389
67 R B -1.4475
68 F B 0.0000
69 T B -0.6533
70 I B 0.0000
71 S B -0.3196
72 R B -0.8475
73 D B -1.4076
74 N B -1.6140
75 A B -1.3164
76 K B -2.1995
77 N B -1.6246
78 T B -0.9535
79 L B 0.0000
80 Y B -0.5987
81 L B 0.0000
82 Q B -1.3822
83 M B 0.0000
84 S B -1.0207
85 S B -1.0114
86 L B 0.0000
87 R B -2.6139
88 A B -2.2287
89 E B -2.4646
90 D B 0.0000
91 T B -1.0680
92 A B 0.0000
93 V B 0.5779
94 Y B 0.0000
95 Y B 0.1115
96 C B 0.0000
97 A B 0.0000
98 V B 0.0000
99 T B 0.0000
100 I B -1.0027
101 R B -2.2611
102 G B -1.6330
103 A B -1.2493
104 A B -0.5798
105 T B -0.8513
106 Q B -1.4443
107 T B -1.0475
108 W B -1.3646
109 K B -2.1951
110 Y B -0.9253
111 D B -0.6577
112 Y B 0.2561
113 W B 0.4429
114 G B -0.0825
115 Q B -0.9718
116 G B -0.0240
117 T B 0.4570
118 L B 1.1202
119 V B 0.0000
120 T B -1.3837
121 V B 0.0000
122 K B -3.3434
123 P B -2.7235
124 E B -3.0824
125 P B -2.2798
126 K B -2.5042
127 S B -1.5825
128 C B -1.0424
129 D B -2.6581
130 K B -2.7060
131 T B -1.8090
132 H B -1.8902
133 T B -0.8487
134 C B -0.3476
135 P B -0.3060
136 P B -0.1354
137 C B 0.1344
138 P B -0.3815
139 A B -0.4246
140 P B -0.8060
141 E B -1.0782
142 L B 0.6026
143 L B 1.1497
144 G B 0.2055
145 G B -0.0982
146 P B 0.0000
147 S B 0.1960
148 V B 0.0000
149 F B 1.3851
150 L B 1.0160
151 F B 1.2033
152 P B -0.1463
153 P B 0.0000
154 K B -2.0900
155 P B -1.3825
156 K B -1.2535
157 D B 0.0000
158 T B 0.0000
159 L B 0.0000
160 M B 0.3355
161 I B 1.5525
162 S B 0.0820
163 R B -1.1480
164 T B -0.7658
165 P B 0.0000
166 E B -1.2094
167 V B 0.0000
168 T B 0.2058
169 C B 0.0000
170 V B 0.0000
171 V B 0.0000
172 V B -0.7049
173 D B -1.3056
174 V B 0.0000
175 S B -1.9974
176 H B -2.1881
177 E B -2.7400
178 D B -2.3952
179 P B -2.3793
180 E B -3.0486
181 V B -2.0018
182 K B -2.2145
183 F B -1.1618
184 N B -1.0954
185 W B 0.0000
186 Y B -0.6289
187 V B -0.9445
188 D B -2.2301
189 G B -0.9098
190 V B 0.7575
191 E B -0.5275
192 V B -0.4839
193 H B -1.8435
194 N B -2.1520
195 A B -1.8508
196 K B -2.3347
197 T B -1.7467
198 K B -1.9121
199 P B -2.1297
200 R B -3.3228
201 E B -3.3223
202 E B -3.2294
203 Q B -1.6920
204 Y B 0.1661
205 Q B -0.6813
206 S B -0.9204
207 T B -1.7589
208 Y B 0.0000
209 R B -2.1942
210 V B 0.0000
211 V B 0.0000
212 S B 0.0000
213 V B 0.0000
214 L B 0.0000
215 T B -0.7314
216 V B 0.0000
217 L B 0.7157
218 H B -0.1805
219 Q B -1.2913
220 D B -1.3885
221 W B 0.0000
222 L B -1.0752
223 N B -2.1640
224 G B -2.0853
225 K B -2.2488
226 E B -2.6213
227 Y B 0.0000
228 K B -1.6665
229 C B 0.0000
230 K B -1.4710
231 V B 0.0000
232 S B -1.4643
233 N B 0.0000
234 K B -2.5325
235 A B -1.2716
236 L B -0.4129
237 P B -0.2932
238 A B -0.4417
239 P B -0.8736
240 I B -0.5597
241 E B -1.8796
242 K B -1.1110
243 T B -1.0292
244 I B -0.3041
245 S B -1.2576
246 K B -1.3416
247 A B -1.1930
248 K B -2.3263
249 G B -1.9672
250 Q B -1.9504
251 P B -1.7540
252 R B -2.0488
253 E B -2.4596
254 P B 0.0000
255 Q B -1.2546
256 V B 0.0000
257 Y B 0.0000
258 T B -0.8427
259 L B 0.0000
260 P B -0.2749
261 P B -0.7654
262 C B 0.0000
263 R B -2.7959
264 D B -2.9611
265 E B 0.0000
266 L B -2.0024
267 T B -1.8999
268 K B -2.4353
269 N B -2.5434
270 Q B -2.2571
271 V B 0.0000
272 S B 0.0000
273 L B 0.0000
274 W B 0.0000
275 C B 0.0000
276 L B 0.0000
277 V B 0.0000
278 K B -0.4323
279 G B 0.0000
280 F B 0.0000
281 Y B -1.0274
282 P B 0.0000
283 S B -0.1976
284 D B -1.1544
285 I B -0.5863
286 A B 0.0000
287 V B 0.0000
288 E B -1.1014
289 W B 0.0000
290 E B -1.6752
291 S B 0.0000
292 N B -1.7738
293 G B -1.7117
294 Q B -2.2888
295 P B -1.9405
296 E B -1.8403
297 N B -2.0679
298 N B -1.4432
299 Y B -1.0339
300 K B -0.8268
301 T B -0.4389
302 T B 0.0000
303 P B -0.0226
304 P B 0.2279
305 V B 0.7074
306 L B 1.0800
307 D B -0.3141
308 S B -1.0479
309 D B -1.8653
310 G B -0.8509
311 S B 0.0000
312 F B 0.2955
313 F B 0.0000
314 L B 0.0000
315 Y B 0.0000
316 S B 0.0000
317 K B 0.0000
318 L B 0.0000
319 T B -0.8377
320 V B 0.0000
321 D B -2.2277
322 K B -2.4363
323 S B -2.1045
324 R B -1.7609
325 W B 0.0000
326 Q B -2.0992
327 Q B -1.9351
328 G B -0.8074
329 N B -0.4863
330 V B 0.6952
331 F B 0.0000
332 S B 0.0000
333 C B 0.0000
334 S B 0.0000
335 V B 0.0000
336 M B -0.3468
337 H B 0.0000
338 E B -1.0185
339 A B -1.4366
340 L B -1.3247
341 H B -1.6951
342 N B -1.6064
343 H B -1.0575
344 Y B -0.2188
345 T B -0.6062
346 Q B -1.0408
347 K B -1.1457
348 S B -0.5295
349 L B 0.0000
350 S B 0.0000
351 L B 0.2692
352 S B -0.4819
353 G B -0.3324
354 G B -0.8974
355 G B -1.7285
356 G B -1.4904
357 S B -1.4994
358 D B -2.3377
359 L B -0.7768
360 R B -2.2688
361 Q B -1.8113
362 G B 0.0000
363 M B 0.0000
364 F B 0.0000
365 A B 0.0000
366 Q B 0.0000
367 L B 0.0000
368 V B 0.0000
369 A B 0.0000
370 Q B -0.7371
371 N B -0.0218
372 V B 0.5116
373 L B 1.5249
374 L B 0.0000
375 I B 1.2855
376 D B -1.0230
377 G B -0.6081
378 P B -0.5367
379 L B 0.0000
380 S B -1.0916
381 W B 0.0000
382 Y B -0.3357
383 S B -0.9718
384 D B -1.6047
385 P B -0.9394
386 G B -0.7058
387 L B 0.0732
388 A B -0.0233
389 G B -0.4317
390 V B 0.0000
391 S B -0.3291
392 L B -0.2249
393 T B -0.4746
394 G B -1.2116
395 G B -1.0746
396 L B 0.0000
397 S B -0.5451
398 Y B 0.0000
399 K B -2.3483
400 E B -3.1404
401 D B -3.0408
402 T B -1.9423
403 K B -2.0016
404 E B 0.0000
405 L B 0.0000
406 V B -0.4689
407 V B 0.0000
408 A B -1.0899
409 K B -1.9223
410 S B -1.2726
411 G B -0.8716
412 V B 0.0000
413 Y B 0.0000
414 Y B 0.0000
415 V B 0.0000
416 F B 0.0000
417 F B 0.0000
418 Q B 0.0000
419 L B 0.0000
420 E B -0.7574
421 L B 0.0000
422 R B -1.9693
423 R B 0.0000
424 V B 0.6514
425 V B 0.3248
426 A B -0.0413
427 G B -0.9664
428 E B -1.1449
429 G B 0.0000
430 S B -1.6156
431 G B -1.5145
432 S B -1.3837
433 V B 0.0000
434 S B -0.8655
435 L B 0.0000
436 A B -0.1816
437 L B 0.0000
438 Y B 0.2108
439 L B -0.2082
440 Q B -0.6679
441 P B -0.6835
442 L B -0.3987
443 R B -1.7048
444 S B -0.9593
445 A B -0.5161
446 S B -0.5710
447 G B -0.5567
448 A B -0.0580
449 A B 0.0980
450 A B 0.1575
451 L B 0.0000
452 A B 0.0013
453 L B 0.0000
454 T B -0.1500
455 V B 0.0000
456 D B -0.6769
457 L B 0.0000
458 P B -1.2923
459 P B -1.4278
460 A B -1.1061
461 S B -1.2604
462 S B -1.5303
463 E B -2.3868
464 A B -1.8144
465 R B -2.1723
466 N B -2.2216
467 S B -1.4882
468 A B 0.0000
469 F B 0.1986
470 G B 0.0000
471 F B 0.0000
472 Q B 0.0000
473 G B 0.0000
474 R B -0.3816
475 L B 0.0000
476 L B -0.4690
477 H B -1.0479
478 L B 0.0000
479 S B -0.8046
480 A B -0.9375
481 G B -0.8969
482 Q B 0.0000
483 R B -0.6148
484 L B 0.0000
485 G B 0.0000
486 V B 0.0000
487 H B -0.6436
488 L B 0.0000
489 H B -1.6301
490 T B 0.0000
491 E B -3.0728
492 A B -2.4194
493 R B -3.1335
494 A B 0.0000
495 R B -2.4072
496 H B -1.5909
497 A B 0.0000
498 W B 0.0000
499 Q B -0.2366
500 L B 0.0000
501 T B -1.1183
502 Q B -1.7944
503 G B -1.0725
504 A B -0.6497
505 T B 0.0000
506 V B 0.0000
507 L B 0.0000
508 G B 0.0000
509 L B 0.0000
510 F B 0.0000
511 R B -0.7150
512 C B 0.0000
513 T B -1.0827
514 P B -1.8446
515 E B -2.9296
Download PDB file
View in 3Dmol

Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.5954 5.0775 View CSV PDB
4.5 -0.6512 5.0775 View CSV PDB
5.0 -0.7173 5.0775 View CSV PDB
5.5 -0.78 5.0775 View CSV PDB
6.0 -0.8257 5.0775 View CSV PDB
6.5 -0.846 5.0775 View CSV PDB
7.0 -0.8426 5.0775 View CSV PDB
7.5 -0.8244 5.0775 View CSV PDB
8.0 -0.7984 5.0775 View CSV PDB
8.5 -0.7668 5.0775 View CSV PDB
9.0 -0.7294 5.0775 View CSV PDB