Chain sequence(s) |
A: MATIATGLNIATQRVFVTSENRPVCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKDNPETNECRTYDN
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.0885 | |
2 | A | A | 0.3827 | |
3 | T | A | 0.6145 | |
4 | I | A | 1.9974 | |
5 | A | A | 1.1503 | |
6 | T | A | 1.4249 | |
7 | G | A | 1.1329 | |
8 | L | A | 1.4544 | |
9 | N | A | 0.3870 | |
10 | I | A | 1.5303 | |
11 | A | A | 0.4739 | |
12 | T | A | -0.3820 | |
13 | Q | A | -0.6575 | |
14 | R | A | -0.6036 | |
15 | V | A | 1.2661 | |
16 | F | A | 2.0790 | |
17 | V | A | 2.6785 | |
18 | T | A | 0.9083 | |
19 | S | A | -0.5512 | |
20 | E | A | -2.3399 | |
21 | N | A | -2.9127 | |
22 | R | A | -2.3939 | |
23 | P | A | -0.3153 | |
24 | V | A | 2.0261 | |
25 | C | A | 2.4183 | |
26 | L | A | 2.4102 | |
27 | A | A | 1.4070 | |
28 | G | A | 0.0223 | |
29 | P | A | -0.0507 | |
30 | V | A | 0.8784 | |
31 | H | A | -0.2090 | |
32 | L | A | 0.3632 | |
33 | N | A | -1.0996 | |
34 | N | A | -1.3234 | |
35 | S | A | -0.6019 | |
36 | W | A | 0.2859 | |
37 | N | A | -0.3954 | |
38 | L | A | 0.5707 | |
39 | G | A | -0.5341 | |
40 | S | A | -1.1177 | |
41 | R | A | -2.0488 | |
42 | T | A | -1.6318 | |
43 | T | A | -1.5995 | |
44 | N | A | -2.0009 | |
45 | R | A | -1.8950 | |
46 | M | A | 0.0240 | |
47 | M | A | 0.3514 | |
48 | K | A | -0.7491 | |
49 | L | A | 0.8054 | |
50 | Q | A | -0.6443 | |
51 | P | A | -0.1486 | |
52 | I | A | 0.9777 | |
53 | K | A | -0.9677 | |
54 | A | A | -0.5693 | |
55 | A | A | -0.5178 | |
56 | P | A | -1.7023 | |
57 | E | A | -2.1778 | |
58 | G | A | -1.6149 | |
59 | G | A | -0.9384 | |
60 | I | A | -0.2802 | |
61 | S | A | -1.1495 | |
62 | D | A | -2.8433 | |
63 | V | A | -1.7128 | |
64 | V | A | -2.3417 | |
65 | E | A | -3.4190 | |
66 | K | A | -3.9541 | |
67 | S | A | -3.2129 | |
68 | I | A | -2.9209 | |
69 | K | A | -4.1904 | |
70 | E | A | -4.0441 | |
71 | A | A | 0.0000 | |
72 | Q | A | -3.2234 | |
73 | E | A | -3.4491 | |
74 | T | A | -2.3577 | |
75 | C | A | -1.6824 | |
76 | A | A | -1.6807 | |
77 | G | A | -1.3540 | |
78 | D | A | -1.4042 | |
79 | P | A | -0.2661 | |
80 | V | A | 1.1437 | |
81 | S | A | -0.1629 | |
82 | G | A | -0.4934 | |
83 | E | A | -1.5017 | |
84 | C | A | 0.0000 | |
85 | V | A | 0.9100 | |
86 | A | A | -0.9677 | |
87 | A | A | -1.8785 | |
88 | W | A | -1.3461 | |
89 | D | A | -3.0866 | |
90 | E | A | -3.1767 | |
91 | V | A | 0.0000 | |
92 | E | A | -3.4924 | |
93 | E | A | -3.4166 | |
94 | L | A | -1.6233 | |
95 | S | A | -1.5833 | |
96 | A | A | -1.6005 | |
97 | A | A | -1.1065 | |
98 | A | A | 0.0000 | |
99 | S | A | -1.8859 | |
100 | H | A | -2.9404 | |
101 | A | A | -2.8934 | |
102 | R | A | -4.3139 | |
103 | D | A | -4.9327 | |
104 | K | A | -5.1720 | |
105 | K | A | -5.3192 | |
106 | K | A | -4.9885 | |
107 | A | A | -3.7429 | |
108 | D | A | -4.4668 | |
109 | G | A | -3.4546 | |
110 | S | A | -2.7196 | |
111 | D | A | -2.1555 | |
112 | P | A | -1.3945 | |
113 | L | A | -1.2139 | |
114 | E | A | -3.4562 | |
115 | E | A | -3.5610 | |
116 | Y | A | -1.6645 | |
117 | C | A | -3.1077 | |
118 | K | A | -3.5122 | |
119 | D | A | -3.2672 | |
120 | N | A | -3.0079 | |
121 | P | A | -3.1816 | |
122 | E | A | -3.5619 | |
123 | T | A | -2.8270 | |
124 | N | A | -3.2331 | |
125 | E | A | -3.1501 | |
126 | C | A | -2.9357 | |
127 | R | A | -3.0660 | |
128 | T | A | -1.5658 | |
129 | Y | A | -0.3524 | |
130 | D | A | -1.7814 | |
131 | N | A | -1.7848 |