Chain sequence(s) |
A: MARFSIVFAAAGVLLLVAMAPVSEASTTTIITTIIEENPYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQM
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.9329 | |
2 | A | A | 0.0232 | |
3 | R | A | -0.3485 | |
4 | F | A | 1.7019 | |
5 | S | A | 1.9662 | |
6 | I | A | 3.5268 | |
7 | V | A | 4.0832 | |
8 | F | A | 3.3042 | |
9 | A | A | 1.8860 | |
10 | A | A | 1.3007 | |
11 | A | A | 1.0266 | |
12 | G | A | 1.1149 | |
13 | V | A | 2.9098 | |
14 | L | A | 3.8279 | |
15 | L | A | 3.8991 | |
16 | L | A | 4.0044 | |
17 | V | A | 3.5738 | |
18 | A | A | 2.1922 | |
19 | M | A | 2.1017 | |
20 | A | A | 1.2183 | |
21 | P | A | 0.6313 | |
22 | V | A | 1.2972 | |
23 | S | A | -0.3421 | |
24 | E | A | -1.6020 | |
25 | A | A | -0.7841 | |
26 | S | A | -0.8176 | |
27 | T | A | -0.1282 | |
28 | T | A | 0.6352 | |
29 | T | A | 1.4330 | |
30 | I | A | 2.9005 | |
31 | I | A | 3.1925 | |
32 | T | A | 2.4451 | |
33 | T | A | 2.2021 | |
34 | I | A | 2.3485 | |
35 | I | A | 1.2722 | |
36 | E | A | -1.4063 | |
37 | E | A | -2.3122 | |
38 | N | A | -2.3131 | |
39 | P | A | -1.3026 | |
40 | Y | A | -0.2007 | |
41 | G | A | -1.3910 | |
42 | R | A | -2.7581 | |
43 | G | A | -2.3409 | |
44 | R | A | -2.8379 | |
45 | T | A | -1.8615 | |
46 | E | A | -1.8992 | |
47 | S | A | -1.3624 | |
48 | G | A | -1.0799 | |
49 | C | A | 0.0000 | |
50 | Y | A | -0.7152 | |
51 | Q | A | -2.1248 | |
52 | Q | A | -2.4709 | |
53 | M | A | 0.0000 | |
54 | E | A | -3.6115 | |
55 | E | A | -3.6839 | |
56 | A | A | 0.0000 | |
57 | E | A | -3.3115 | |
58 | M | A | -2.0553 | |
59 | L | A | 0.0000 | |
60 | N | A | -1.7913 | |
61 | H | A | -1.0293 | |
62 | C | A | 0.0000 | |
63 | G | A | 0.0000 | |
64 | M | A | -0.5074 | |
65 | Y | A | 0.0000 | |
66 | L | A | 0.0000 | |
67 | M | A | -1.1359 | |
68 | K | A | -2.2273 | |
69 | N | A | -1.5582 | |
70 | L | A | -1.3620 | |
71 | G | A | -2.0287 | |
72 | E | A | -2.9602 | |
73 | R | A | -3.1723 | |
74 | S | A | -2.0942 | |
75 | Q | A | -1.8779 | |
76 | V | A | -1.0033 | |
77 | S | A | -1.1288 | |
78 | P | A | -1.6190 | |
79 | R | A | -2.3025 | |
80 | M | A | -2.0332 | |
81 | R | A | -3.5026 | |
82 | E | A | -3.6653 | |
83 | E | A | -3.6642 | |
84 | D | A | -3.0814 | |
85 | H | A | 0.0000 | |
86 | K | A | -2.2942 | |
87 | Q | A | -1.8837 | |
88 | L | A | -0.8332 | |
89 | C | A | 0.0000 | |
90 | C | A | -0.6811 | |
91 | M | A | -0.1354 | |
92 | Q | A | 0.0000 | |
93 | L | A | 0.0000 | |
94 | K | A | -2.4114 | |
95 | N | A | -2.5920 | |
96 | L | A | 0.0000 | |
97 | D | A | -3.0604 | |
98 | E | A | -3.4264 | |
99 | K | A | -2.9196 | |
100 | C | A | 0.0000 | |
101 | M | A | 0.0000 | |
102 | C | A | -0.7363 | |
103 | P | A | -0.3447 | |
104 | A | A | 0.0000 | |
105 | I | A | 0.0000 | |
106 | M | A | -0.0055 | |
107 | M | A | -0.2305 | |
108 | M | A | 0.0000 | |
109 | L | A | 0.0000 | |
110 | N | A | -1.3298 | |
111 | E | A | -1.0446 | |
112 | P | A | -0.3901 | |
113 | M | A | 0.3658 | |
114 | W | A | 0.0000 | |
115 | I | A | -0.2706 | |
116 | R | A | -1.7582 | |
117 | M | A | -1.2880 | |
118 | R | A | -1.8875 | |
119 | D | A | -2.6520 | |
120 | Q | A | -2.3210 | |
121 | V | A | 0.0000 | |
122 | M | A | -0.6742 | |
123 | S | A | -0.7710 | |
124 | M | A | -0.4956 | |
125 | A | A | 0.0000 | |
126 | H | A | 0.0000 | |
127 | N | A | -0.7522 | |
128 | L | A | 0.0000 | |
129 | P | A | 0.0000 | |
130 | I | A | -0.4778 | |
131 | E | A | -0.9909 | |
132 | C | A | -0.9996 | |
133 | N | A | -1.4020 | |
134 | L | A | -0.9496 | |
135 | M | A | -0.7438 | |
136 | S | A | -0.8462 | |
137 | Q | A | -1.4930 | |
138 | P | A | -0.9975 | |
139 | C | A | 0.0000 | |
140 | Q | A | -0.8998 | |
141 | M | A | 0.5177 |