Chain sequence(s) |
A: MQYYENREKDYYEVAQGQRNGYGQSQSHNHEGYGQSQSRGGYGQIHNREGYNQNREGYSQSQSRPVYGLSPTLNHRSHGGFLDGLFKGQNGQKGQSGLGTFLGQHKSQEAKKSQGHGKLLGQHDQKKTHETNSGLNGLGMFINNGEKKHRRKSEHKKKNKDGHGSGNESGSSSGSDSD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.0144 | |
2 | Q | A | -0.0419 | |
3 | Y | A | 0.7886 | |
4 | Y | A | -0.0549 | |
5 | E | A | -2.7613 | |
6 | N | A | -3.7674 | |
7 | R | A | -4.0909 | |
8 | E | A | -4.1618 | |
9 | K | A | -3.9822 | |
10 | D | A | -2.9976 | |
11 | Y | A | -0.5084 | |
12 | Y | A | -0.0919 | |
13 | E | A | -1.7432 | |
14 | V | A | 0.3944 | |
15 | A | A | -0.4305 | |
16 | Q | A | -2.0271 | |
17 | G | A | -2.2690 | |
18 | Q | A | -2.9745 | |
19 | R | A | -3.4456 | |
20 | N | A | -2.7029 | |
21 | G | A | -1.4265 | |
22 | Y | A | 0.0084 | |
23 | G | A | -0.9077 | |
24 | Q | A | -1.5756 | |
25 | S | A | -1.6562 | |
26 | Q | A | -2.0913 | |
27 | S | A | -1.9263 | |
28 | H | A | -2.2628 | |
29 | N | A | -2.8939 | |
30 | H | A | -2.7891 | |
31 | E | A | -2.5244 | |
32 | G | A | -1.3228 | |
33 | Y | A | 0.0700 | |
34 | G | A | -0.7561 | |
35 | Q | A | -1.5906 | |
36 | S | A | -1.8224 | |
37 | Q | A | -2.2578 | |
38 | S | A | -1.9311 | |
39 | R | A | -2.6563 | |
40 | G | A | -1.5926 | |
41 | G | A | -0.7944 | |
42 | Y | A | 0.6793 | |
43 | G | A | -0.2715 | |
44 | Q | A | -0.5677 | |
45 | I | A | 0.4762 | |
46 | H | A | -1.6857 | |
47 | N | A | -2.7555 | |
48 | R | A | -3.3917 | |
49 | E | A | -3.1807 | |
50 | G | A | -1.7765 | |
51 | Y | A | -0.4406 | |
52 | N | A | -2.0625 | |
53 | Q | A | -2.6730 | |
54 | N | A | -3.5320 | |
55 | R | A | -3.7769 | |
56 | E | A | -3.0409 | |
57 | G | A | -1.5309 | |
58 | Y | A | -0.0216 | |
59 | S | A | -0.9867 | |
60 | Q | A | -1.4475 | |
61 | S | A | -1.5721 | |
62 | Q | A | -2.3609 | |
63 | S | A | -1.7295 | |
64 | R | A | -1.7926 | |
65 | P | A | -0.0302 | |
66 | V | A | 1.8931 | |
67 | Y | A | 1.9630 | |
68 | G | A | 1.3200 | |
69 | L | A | 1.7793 | |
70 | S | A | 0.9372 | |
71 | P | A | 0.0136 | |
72 | T | A | -0.1301 | |
73 | L | A | 0.0629 | |
74 | N | A | -1.7732 | |
75 | H | A | -2.4919 | |
76 | R | A | -2.8640 | |
77 | S | A | -1.7784 | |
78 | H | A | -1.7924 | |
79 | G | A | -1.3517 | |
80 | G | A | -0.4741 | |
81 | F | A | 1.9877 | |
82 | L | A | 1.5890 | |
83 | D | A | -0.5787 | |
84 | G | A | 0.1333 | |
85 | L | A | 1.8531 | |
86 | F | A | 1.0875 | |
87 | K | A | -1.7175 | |
88 | G | A | -2.2162 | |
89 | Q | A | -2.1729 | |
90 | N | A | -2.8339 | |
91 | G | A | -2.9039 | |
92 | Q | A | -3.1811 | |
93 | K | A | -3.1337 | |
94 | G | A | -2.4326 | |
95 | Q | A | -2.0258 | |
96 | S | A | -0.8693 | |
97 | G | A | -0.0603 | |
98 | L | A | 1.4078 | |
99 | G | A | 0.9214 | |
100 | T | A | 1.0840 | |
101 | F | A | 2.4475 | |
102 | L | A | 1.8061 | |
103 | G | A | -0.2841 | |
104 | Q | A | -1.8529 | |
105 | H | A | -2.5312 | |
106 | K | A | -3.1444 | |
107 | S | A | -2.4885 | |
108 | Q | A | -2.9015 | |
109 | E | A | -3.3774 | |
110 | A | A | -2.5034 | |
111 | K | A | -3.4079 | |
112 | K | A | -3.2571 | |
113 | S | A | -2.3911 | |
114 | Q | A | -2.4537 | |
115 | G | A | -2.1725 | |
116 | H | A | -1.9628 | |
117 | G | A | -1.4497 | |
118 | K | A | -1.1367 | |
119 | L | A | 1.0161 | |
120 | L | A | 1.3302 | |
121 | G | A | -0.3441 | |
122 | Q | A | -1.7853 | |
123 | H | A | -2.8304 | |
124 | D | A | -3.5488 | |
125 | Q | A | -3.5542 | |
126 | K | A | -3.6015 | |
127 | K | A | -3.0901 | |
128 | T | A | -2.2083 | |
129 | H | A | -2.4269 | |
130 | E | A | -2.6601 | |
131 | T | A | -1.9704 | |
132 | N | A | -1.8250 | |
133 | S | A | -1.1360 | |
134 | G | A | -0.7153 | |
135 | L | A | 0.5220 | |
136 | N | A | -0.6809 | |
137 | G | A | 0.0322 | |
138 | L | A | 1.5980 | |
139 | G | A | 1.4543 | |
140 | M | A | 2.5512 | |
141 | F | A | 2.9854 | |
142 | I | A | 2.1423 | |
143 | N | A | -0.5720 | |
144 | N | A | -1.9747 | |
145 | G | A | -2.7248 | |
146 | E | A | -3.9154 | |
147 | K | A | -4.1606 | |
148 | K | A | -4.2330 | |
149 | H | A | -4.0116 | |
150 | R | A | -4.2727 | |
151 | R | A | -4.0468 | |
152 | K | A | -3.6843 | |
153 | S | A | -2.5704 | |
154 | E | A | -3.3374 | |
155 | H | A | -3.2011 | |
156 | K | A | -3.7988 | |
157 | K | A | -4.0682 | |
158 | K | A | -4.1079 | |
159 | N | A | -3.8205 | |
160 | K | A | -3.6989 | |
161 | D | A | -3.5633 | |
162 | G | A | -2.4742 | |
163 | H | A | -1.9469 | |
164 | G | A | -1.4095 | |
165 | S | A | -1.4326 | |
166 | G | A | -1.8499 | |
167 | N | A | -2.6858 | |
168 | E | A | -2.8593 | |
169 | S | A | -1.6781 | |
170 | G | A | -1.2756 | |
171 | S | A | -0.6403 | |
172 | S | A | -0.6267 | |
173 | S | A | -0.6717 | |
174 | G | A | -1.1092 | |
175 | S | A | -1.4064 | |
176 | D | A | -2.4496 | |
177 | S | A | -2.0116 | |
178 | D | A | -2.2520 |