Project name: jrk_3AP37

Status: done

Started: 2026-02-06 22:11:42
Chain sequence(s) A: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
C: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
B: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
D: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
input PDB
Selected Chain(s) A,B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:13)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:14)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:59:09)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/ff616a21a48179/tmp/folded.pdb                 (00:59:09)
[INFO]       Main:     Simulation completed successfully.                                          (01:36:13)
Show buried residues

Minimal score value
-4.7896
Maximal score value
1.0513
Average score
-0.7904
Total score value
-1485.9625

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 A A -1.5150
2 K A -2.3208
3 F A 0.0000
4 P A -2.1099
5 K A -2.8295
6 N A -2.4873
7 F A 0.0000
8 M A -1.0352
9 F A 0.0000
10 G A 0.0000
11 Y A 0.0000
12 S A 0.0000
13 W A 0.0000
14 S A 0.0000
15 G A -0.1376
16 F A 0.0000
17 Q A 0.0000
18 F A 0.0000
19 E A 0.0000
20 M A 0.0000
21 G A 0.0000
22 L A -0.4977
23 P A -1.0335
24 G A -0.9734
25 S A 0.0000
26 E A -2.4066
27 V A -1.6142
28 E A -1.8168
29 S A 0.0000
30 D A 0.0000
31 W A 0.0000
32 W A 0.0000
33 V A 0.1911
34 W A 0.0000
35 V A 0.0000
36 H A -1.3948
37 D A -1.4419
38 K A -2.0927
39 E A -1.0470
40 N A 0.0000
41 I A -0.6359
42 A A -0.3782
43 S A 0.0000
44 G A -0.5838
45 L A 0.0000
46 V A 0.0000
47 S A -0.5794
48 G A -1.0691
49 D A -1.3876
50 L A -1.2816
51 P A 0.0000
52 E A -2.5314
53 N A -2.2811
54 G A 0.0000
55 P A 0.0000
56 A A 0.0000
57 Y A 0.0000
58 W A 0.0000
59 H A -0.6949
60 L A -0.6913
61 Y A 0.0000
62 K A -2.9199
63 Q A -2.7968
64 D A 0.0000
65 H A 0.0000
66 D A -3.4195
67 I A -2.0920
68 A A 0.0000
69 E A -2.9303
70 K A -2.4872
71 L A 0.0000
72 G A -1.4927
73 M A 0.0000
74 D A -1.0316
75 C A 0.0000
76 I A 0.0000
77 R A 0.0000
78 G A 0.0000
79 G A -0.1680
80 I A 0.0000
81 E A -0.4179
82 W A 0.0000
83 A A 0.0000
84 R A 0.0000
85 I A 0.0000
86 F A 0.0000
87 P A -1.1578
88 K A -2.0206
89 P A -1.0043
90 T A 0.0000
91 F A -0.8815
92 D A -2.2279
93 V A 0.0000
94 K A -2.3979
95 V A -2.1412
96 D A -2.9960
97 V A -2.2885
98 E A -2.9492
99 K A -3.4109
100 D A -3.7233
101 E A -3.9390
102 E A -3.8129
103 G A -3.4353
104 N A -2.3820
105 I A 0.0000
106 I A -0.0834
107 S A -1.2176
108 V A -1.7850
109 D A -3.0821
110 V A 0.0000
111 P A -2.3805
112 E A -2.8060
113 S A -2.2704
114 T A 0.0000
115 I A 0.0000
116 K A -3.4955
117 E A -3.8182
118 L A 0.0000
119 E A -2.6555
120 K A -2.9891
121 I A -1.8328
122 A A -1.5212
123 N A -1.5428
124 M A -1.5453
125 E A -2.3258
126 A A 0.0000
127 L A 0.0000
128 E A -2.7233
129 H A -2.1021
130 Y A 0.0000
131 R A -2.0646
132 K A -2.5257
133 I A 0.0000
134 Y A 0.0000
135 S A -1.9389
136 D A -2.1573
137 W A 0.0000
138 K A -2.1116
139 E A -2.5466
140 R A -2.4247
141 G A -1.6611
142 K A -1.3128
143 T A -0.6251
144 F A 0.0000
145 I A 0.0000
146 L A 0.0000
147 N A 0.0000
148 L A 0.0000
149 Y A 0.0000
150 H A -0.1517
151 W A 0.1106
152 P A 0.0000
153 L A 0.0000
154 P A 0.0000
155 L A 0.0781
156 W A 0.0100
157 I A 0.0000
158 H A 0.0000
159 D A -0.4664
160 P A 0.0000
161 I A -0.0611
162 A A 0.0000
163 V A 0.0000
164 R A 0.0000
165 K A -1.2266
166 L A -1.0888
167 G A 0.0000
168 P A -1.6917
169 D A -2.6572
170 R A -2.6538
171 A A -1.6995
172 P A -1.1419
173 A A 0.0000
174 G A 0.0000
175 W A 0.0000
176 L A 0.0000
177 D A -2.2754
178 E A -3.2332
179 K A -2.0707
180 T A 0.0000
181 V A 0.0000
182 V A 0.0000
183 E A 0.0000
184 F A 0.0000
185 V A 0.0000
186 K A 0.0000
187 F A 0.0000
188 A A 0.0000
189 A A 0.0000
190 F A 0.0000
191 V A 0.0000
192 A A 0.0000
193 Y A 0.3208
194 H A -0.2668
195 L A 0.0000
196 D A -1.3881
197 D A -2.0253
198 L A 0.0000
199 V A 0.0000
200 D A -1.3602
201 M A -0.6335
202 W A 0.0000
203 S A 0.0000
204 T A 0.0000
205 M A 0.0000
206 N A 0.0000
207 E A -0.1355
208 P A 0.0000
209 N A -0.5846
210 V A 0.1720
211 V A 0.0000
212 Y A -0.3548
213 N A -0.2806
214 Q A -0.4118
215 G A 0.0000
216 Y A 0.0000
217 I A 0.3478
218 N A -0.8141
219 L A 0.0000
220 R A -2.4249
221 S A -1.3183
222 G A 0.0000
223 F A 0.0000
224 P A 0.0000
225 P A 0.0000
226 G A -0.4184
227 Y A 0.0879
228 L A 0.0181
229 S A -0.4274
230 F A 0.0048
231 E A -2.1145
232 A A 0.0000
233 A A 0.0000
234 E A -2.9282
235 K A -2.7860
236 A A 0.0000
237 K A -1.6632
238 F A -1.1030
239 N A 0.0000
240 L A 0.0000
241 I A 0.1260
242 Q A 0.0000
243 A A 0.0000
244 H A 0.0000
245 I A -0.1406
246 G A 0.0000
247 A A 0.0000
248 Y A -0.9594
249 D A -2.1283
250 A A 0.0000
251 I A 0.0000
252 K A -2.4801
253 E A -2.7108
254 Y A -1.1086
255 S A 0.0000
256 E A -2.5565
257 K A -1.6062
258 S A -0.9769
259 V A 0.0000
260 G A 0.0000
261 V A 0.0000
262 I A 0.0000
263 Y A 0.0000
264 A A -0.0262
265 F A 0.0000
266 A A -0.1269
267 W A 0.0000
268 H A 0.0000
269 D A -0.5709
270 P A -1.0958
271 L A 0.5938
272 A A -0.9831
273 E A -3.3096
274 E A -3.4647
275 Y A -3.1002
276 K A -4.4787
277 D A -4.7195
278 E A -4.4356
279 V A 0.0000
280 E A -4.0608
281 E A -4.4888
282 I A -3.1817
283 R A 0.0000
284 K A -4.0304
285 K A -4.3348
286 D A -3.7474
287 Y A 0.0000
288 E A -3.2321
289 F A 0.0000
290 V A 0.0000
291 T A -1.0948
292 I A -0.2563
293 L A 0.0000
294 H A -1.1474
295 S A -1.1425
296 K A -2.0569
297 G A -1.6240
298 K A -1.4972
299 L A 0.0000
300 D A -0.6563
301 W A 0.0000
302 I A 0.0000
303 G A 0.0000
304 V A 0.0000
305 N A 0.0000
306 Y A 0.0000
307 Y A 0.3197
308 S A 0.0000
309 R A 0.1035
310 L A 0.6531
311 V A 0.0000
312 Y A 0.7590
313 G A 0.0000
314 A A -0.9670
315 K A -2.5675
316 D A -2.8691
317 G A -1.9783
318 H A -1.5142
319 L A -0.5630
320 V A 0.7711
321 P A 1.0056
322 L A 0.7048
323 P A -0.1487
324 G A -0.5911
325 Y A -0.0893
326 G A 0.0000
327 F A 1.0180
328 M A 0.1136
329 S A 0.0000
330 E A -2.5407
331 R A -2.6514
332 G A -1.5211
333 G A -0.9071
334 F A -0.2811
335 A A 0.0000
336 K A -1.7898
337 S A -0.8743
338 G A -0.5496
339 R A -0.3516
340 P A 0.0000
341 A A 0.0000
342 S A 0.0000
343 D A -1.7048
344 F A -0.1181
345 G A 0.0000
346 W A 0.1705
347 E A 0.0000
348 M A 0.0000
349 Y A -0.0687
350 P A 0.0000
351 E A -0.9116
352 G A 0.0000
353 L A 0.0000
354 E A -1.3291
355 N A -1.1557
356 L A 0.0000
357 L A 0.0000
358 K A -2.3042
359 Y A -1.3304
360 L A 0.0000
361 N A -2.3769
362 N A -2.0959
363 A A -1.3955
364 Y A 0.0000
365 E A -2.4206
366 L A -1.1381
367 P A -1.0280
368 M A 0.0000
369 I A 0.0000
370 I A 0.0000
371 T A 0.0000
372 E A -0.1774
373 N A 0.0000
374 G A 0.0000
375 M A 0.0000
376 A A 0.0000
377 D A -0.8413
378 A A -0.3704
379 A A -0.0795
380 D A 0.0000
381 R A -0.4738
382 Y A -0.1390
383 R A 0.0000
384 P A 0.0000
385 H A -0.3469
386 Y A 0.0000
387 L A 0.0000
388 V A 0.0000
389 S A 0.0000
390 H A 0.0000
391 L A 0.0000
392 K A -0.9512
393 A A 0.0000
394 V A 0.0000
395 Y A -1.1827
396 N A -1.7165
397 A A 0.0000
398 M A -1.9024
399 K A -2.6730
400 E A -3.1647
401 G A -2.1710
402 A A 0.0000
403 D A -1.6739
404 V A 0.0000
405 R A -1.8347
406 G A 0.0000
407 Y A 0.0000
408 L A 0.0000
409 H A 0.0000
410 W A 0.0000
411 S A 0.0000
412 L A 0.0000
413 T A 0.0000
414 D A 0.0000
415 N A 0.0000
416 Y A 0.0000
417 E A -1.0944
418 W A 0.0000
419 A A -0.6657
420 Q A -1.2701
421 G A 0.0000
422 F A -0.9774
423 R A -1.9941
424 M A -0.9772
425 R A -0.7490
426 F A 0.0000
427 G A 0.0000
428 L A 0.0000
429 V A 0.0000
430 Y A 0.0000
431 V A 0.0000
432 D A -1.4299
433 F A 0.0000
434 E A -2.4319
435 T A -1.7994
436 K A -1.6556
437 K A -2.4301
438 R A -1.2758
439 Y A -0.8191
440 L A 0.0000
441 R A 0.0000
442 P A 0.0000
443 S A 0.0000
444 A A 0.0000
445 L A 0.0000
446 V A 0.0000
447 F A 0.0000
448 R A -0.9663
449 E A -0.6720
450 I A 0.0000
451 A A 0.0000
452 T A -1.0007
453 Q A -1.7076
454 K A -2.0628
455 E A -2.1721
456 I A 0.0000
457 P A -1.6939
458 E A -2.3905
459 E A -1.7908
460 L A 0.0000
461 A A -1.2837
462 H A -1.1558
463 L A 0.0000
464 A A -1.3581
465 D A -1.8542
466 L A -1.1276
467 K A -1.6531
468 F A -0.2664
469 V A -0.1789
470 T A -0.3857
1 A B -1.1258
2 K B -2.3318
3 F B 0.0000
4 P B -2.0876
5 K B -2.6651
6 N B -2.2330
7 F B 0.0000
8 M B -0.8928
9 F B 0.0000
10 G B 0.0000
11 Y B 0.0000
12 S B 0.0000
13 W B 0.0000
14 S B 0.0000
15 G B 0.0000
16 F B 0.0000
17 Q B 0.0000
18 F B 0.0000
19 E B 0.0000
20 M B 0.0000
21 G B 0.0000
22 L B -0.7560
23 P B -1.0294
24 G B -0.9761
25 S B 0.0000
26 E B -2.4582
27 V B -1.5992
28 E B -1.8967
29 S B 0.0000
30 D B 0.0000
31 W B 0.0000
32 W B 0.0000
33 V B -0.2546
34 W B 0.0000
35 V B 0.0000
36 H B -1.5480
37 D B -1.4778
38 K B -2.2797
39 E B -1.2383
40 N B 0.0000
41 I B -1.0888
42 A B -0.6706
43 S B 0.0000
44 G B -1.2240
45 L B 0.0000
46 V B 0.0000
47 S B -0.9500
48 G B -1.2887
49 D B -1.6743
50 L B -1.1667
51 P B 0.0000
52 E B -2.4923
53 N B -2.1188
54 G B 0.0000
55 P B 0.0000
56 A B 0.0000
57 Y B 0.0000
58 W B 0.0000
59 H B -0.7699
60 L B -0.7872
61 Y B 0.0000
62 K B -2.6911
63 Q B -2.4769
64 D B 0.0000
65 H B 0.0000
66 D B -3.1969
67 I B -1.9434
68 A B 0.0000
69 E B -2.5659
70 K B -2.4893
71 L B 0.0000
72 G B -1.3376
73 M B 0.0000
74 D B -0.8738
75 C B 0.0000
76 I B 0.0000
77 R B 0.0000
78 G B 0.0000
79 G B 0.0000
80 I B 0.0000
81 E B -0.1718
82 W B 0.0000
83 A B 0.0000
84 R B 0.0000
85 I B 0.0000
86 F B 0.0000
87 P B -0.9852
88 K B -1.2664
89 P B -0.3952
90 T B 0.0000
91 F B 0.4592
92 D B -1.4291
93 V B 0.0000
94 K B -2.4884
95 V B -1.7195
96 D B -2.9389
97 V B -1.9442
98 E B -2.9990
99 K B -3.6863
100 D B -3.6489
101 E B -3.7189
102 E B -3.5924
103 G B -2.9892
104 N B -2.0531
105 I B 0.0000
106 I B -0.2305
107 S B -1.3774
108 V B 0.0000
109 D B -3.2368
110 V B 0.0000
111 P B -2.3900
112 E B -2.6318
113 S B -2.1119
114 T B 0.0000
115 I B 0.0000
116 K B -3.1193
117 E B -3.7118
118 L B 0.0000
119 E B -2.2992
120 K B -2.6108
121 I B -1.4772
122 A B -1.4420
123 N B -1.5580
124 M B -1.4854
125 E B -2.2855
126 A B 0.0000
127 L B 0.0000
128 E B -2.3592
129 H B -1.8617
130 Y B 0.0000
131 R B -1.7053
132 K B -2.1528
133 I B 0.0000
134 Y B 0.0000
135 S B -1.5836
136 D B 0.0000
137 W B 0.0000
138 K B -1.9705
139 E B -2.4290
140 R B -2.2723
141 G B -1.7070
142 K B -1.4848
143 T B -0.6784
144 F B 0.0000
145 I B 0.0000
146 L B 0.0000
147 N B 0.0000
148 L B 0.0000
149 Y B 0.0000
150 H B -0.2171
151 W B 0.0000
152 P B 0.0000
153 L B 0.0000
154 P B 0.0000
155 L B 0.2355
156 W B 0.1525
157 I B 0.0000
158 H B 0.0000
159 D B -0.4689
160 P B 0.0000
161 I B -0.1612
162 A B -0.5735
163 V B 0.0000
164 R B -0.7326
165 K B -1.2093
166 L B -1.1687
167 G B 0.0000
168 P B -1.4859
169 D B -2.1650
170 R B -1.4553
171 A B -1.1167
172 P B -0.7944
173 A B -1.0729
174 G B 0.0000
175 W B 0.0000
176 L B 0.0000
177 D B -2.3168
178 E B -2.7471
179 K B -2.1245
180 T B 0.0000
181 V B 0.0000
182 V B -0.2916
183 E B 0.0000
184 F B 0.0000
185 V B 0.0000
186 K B 0.0000
187 F B 0.0000
188 A B 0.0000
189 A B 0.0000
190 F B 0.0000
191 V B 0.0000
192 A B 0.0000
193 Y B -0.3390
194 H B -0.4967
195 L B 0.0000
196 D B -1.6584
197 D B -2.0745
198 L B -1.3619
199 V B 0.0000
200 D B -1.2495
201 M B -0.7317
202 W B 0.0000
203 S B 0.0000
204 T B 0.0000
205 M B 0.0000
206 N B -0.2491
207 E B -0.2474
208 P B 0.0000
209 N B -0.4292
210 V B -0.2654
211 V B 0.0000
212 Y B 0.0000
213 N B -1.1372
214 Q B -1.1010
215 G B 0.0000
216 Y B 0.0000
217 I B -0.6240
218 N B -0.9078
219 L B 0.0000
220 R B -2.2645
221 S B -1.3041
222 G B -0.7041
223 F B 0.0000
224 P B 0.0000
225 P B 0.0000
226 G B 0.0000
227 Y B -0.2692
228 L B 0.0000
229 S B -0.6704
230 F B -1.0544
231 E B -2.2121
232 A B 0.0000
233 A B 0.0000
234 E B -2.5709
235 K B -2.1075
236 A B 0.0000
237 K B -1.0360
238 F B -0.1529
239 N B 0.0000
240 L B 0.0000
241 I B 0.5050
242 Q B 0.0000
243 A B 0.0000
244 H B 0.0000
245 I B 0.0000
246 G B 0.0000
247 A B 0.0000
248 Y B -0.7665
249 D B -1.3614
250 A B 0.0000
251 I B 0.0000
252 K B -2.2412
253 E B -2.6753
254 Y B -1.4433
255 S B 0.0000
256 E B -2.5981
257 K B -1.7555
258 S B -1.0570
259 V B 0.0000
260 G B 0.0000
261 V B 0.0000
262 I B 0.0000
263 Y B 0.0000
264 A B -0.0274
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229 S D 0.0000
230 F D -0.7813
231 E D -2.1554
232 A D 0.0000
233 A D -1.4568
234 E D -2.4823
235 K D -2.0607
236 A D 0.0000
237 K D -0.9159
238 F D -0.0314
239 N D 0.0000
240 L D 0.0000
241 I D 0.3685
242 Q D 0.0000
243 A D 0.0000
244 H D 0.0000
245 I D 0.0000
246 G D 0.0000
247 A D 0.0000
248 Y D 0.0000
249 D D -1.2861
250 A D 0.0000
251 I D 0.0000
252 K D -3.0706
253 E D -3.0005
254 Y D -1.9417
255 S D 0.0000
256 E D -2.8192
257 K D -2.1634
258 S D -1.3097
259 V D 0.0000
260 G D 0.0000
261 V D 0.0000
262 I D 0.0000
263 Y D 0.0000
264 A D -0.1076
265 F D 0.0000
266 A D 0.0304
267 W D 0.0000
268 H D 0.0000
269 D D -0.3584
270 P D -1.4377
271 L D 0.3907
272 A D -1.1469
273 E D -3.1350
274 E D -3.3817
275 Y D -2.9352
276 K D -4.3489
277 D D -4.7896
278 E D -4.2123
279 V D 0.0000
280 E D -4.5217
281 E D -4.4104
282 I D -2.8766
283 R D 0.0000
284 K D -3.8783
285 K D -3.8472
286 D D -2.7790
287 Y D 0.0000
288 E D -2.5626
289 F D 0.0000
290 V D 0.0000
291 T D -1.0362
292 I D -0.2667
293 L D 0.0000
294 H D -1.2503
295 S D -0.9220
296 K D -1.5521
297 G D -1.3620
298 K D -1.1588
299 L D 0.0000
300 D D -1.0010
301 W D 0.0000
302 I D 0.0000
303 G D 0.0000
304 V D 0.0000
305 N D 0.0000
306 Y D 0.0000
307 Y D 0.3603
308 S D 0.0000
309 R D 0.0000
310 L D 0.6919
311 V D 0.0000
312 Y D 0.0000
313 G D 0.0000
314 A D -1.3292
315 K D -2.7433
316 D D -2.9570
317 G D -2.3873
318 H D -1.7879
319 L D -0.9394
320 V D -0.2918
321 P D 0.2273
322 L D 0.3875
323 P D -0.1934
324 G D -0.6195
325 Y D -0.1041
326 G D 0.0000
327 F D 1.0513
328 M D 0.5019
329 S D -0.7911
330 E D -2.3663
331 R D -2.2795
332 G D -1.1808
333 G D -1.0265
334 F D -0.3807
335 A D 0.0000
336 K D -1.9394
337 S D -1.0449
338 G D -1.0064
339 R D -0.7526
340 P D 0.0000
341 A D 0.0000
342 S D 0.0000
343 D D 0.0000
344 F D -0.3505
345 G D 0.0000
346 W D 0.4329
347 E D 0.0000
348 M D 0.0000
349 Y D -0.1656
350 P D -0.6422
351 E D -1.2017
352 G D 0.0000
353 L D 0.0000
354 E D -1.4769
355 N D -1.5768
356 L D 0.0000
357 L D 0.0000
358 K D -2.2343
359 Y D -1.0134
360 L D 0.0000
361 N D -2.3816
362 N D -1.8465
363 A D -1.1051
364 Y D 0.0000
365 E D -2.5889
366 L D -1.4286
367 P D -1.4691
368 M D 0.0000
369 I D 0.0000
370 I D 0.0000
371 T D 0.0000
372 E D 0.0000
373 N D 0.0000
374 G D 0.0000
375 M D 0.0000
376 A D 0.0000
377 D D 0.0000
378 A D -0.5772
379 A D 0.0000
380 D D 0.0000
381 R D -0.4085
382 Y D -0.1321
383 R D 0.0000
384 P D 0.0000
385 H D 0.0000
386 Y D 0.0000
387 L D 0.0000
388 V D 0.0000
389 S D 0.0000
390 H D 0.0000
391 L D 0.0000
392 K D -0.8811
393 A D 0.0000
394 V D 0.0000
395 Y D -1.0963
396 N D -1.5670
397 A D 0.0000
398 M D -2.1251
399 K D -2.9225
400 E D -3.1573
401 G D -2.7714
402 A D 0.0000
403 D D -2.9547
404 V D 0.0000
405 R D -1.7430
406 G D 0.0000
407 Y D 0.0000
408 L D 0.0000
409 H D 0.0000
410 W D 0.0000
411 S D 0.0000
412 L D 0.0000
413 T D 0.0000
414 D D 0.0000
415 N D 0.0000
416 Y D 0.0000
417 E D -0.8115
418 W D 0.0000
419 A D -0.7490
420 Q D -1.4985
421 G D -1.1347
422 F D -0.9465
423 R D -1.9245
424 M D 0.0000
425 R D -0.7063
426 F D 0.0000
427 G D 0.0000
428 L D 0.0000
429 V D 0.0000
430 Y D -0.3160
431 V D 0.0000
432 D D -1.4252
433 F D -1.4742
434 E D -2.3847
435 T D -1.4512
436 K D 0.0000
437 K D -2.1702
438 R D -1.2015
439 Y D -1.0041
440 L D 0.0000
441 R D 0.0000
442 P D 0.0000
443 S D 0.0000
444 A D 0.0000
445 L D 0.0000
446 V D 0.0000
447 F D 0.0000
448 R D -0.8593
449 E D -0.5443
450 I D 0.0000
451 A D 0.0000
452 T D -1.0504
453 Q D -1.2808
454 K D -1.7342
455 E D -1.8931
456 I D 0.0000
457 P D 0.0000
458 E D -2.4225
459 E D -1.8371
460 L D 0.0000
461 A D -1.0689
462 H D -0.8063
463 L D 0.0000
464 A D 0.0000
465 D D -1.1176
466 L D 0.0000
467 K D -1.7887
468 F D -0.5883
469 V D 0.0000
470 T D -0.6443
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.6301 3.0176 View CSV PDB
4.5 -0.7073 2.8605 View CSV PDB
5.0 -0.8046 2.7165 View CSV PDB
5.5 -0.9037 2.6789 View CSV PDB
6.0 -0.9838 2.6701 View CSV PDB
6.5 -1.0292 2.6612 View CSV PDB
7.0 -1.0368 2.6523 View CSV PDB
7.5 -1.0172 2.6435 View CSV PDB
8.0 -0.9826 2.6351 View CSV PDB
8.5 -0.9383 2.6276 View CSV PDB
9.0 -0.8851 2.6219 View CSV PDB