Project name: jrk_3AP4

Status: done

Started: 2026-02-06 22:06:48
Chain sequence(s) A: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
C: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
B: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
D: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
input PDB
Selected Chain(s) A,B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:13)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:14)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:50:08)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/ffe49ee551a029d/tmp/folded.pdb                (00:50:08)
[INFO]       Main:     Simulation completed successfully.                                          (01:32:32)
Show buried residues

Minimal score value
-5.0198
Maximal score value
1.4019
Average score
-0.7676
Total score value
-1443.1815

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 A A -1.4852
2 K A -2.3876
3 F A 0.0000
4 P A -2.0737
5 K A -2.8580
6 N A -2.4134
7 F A 0.0000
8 M A -0.9353
9 F A 0.0000
10 G A 0.0000
11 Y A 0.0000
12 S A 0.0000
13 W A 0.0000
14 S A 0.0000
15 G A -0.0492
16 F A 0.0000
17 Q A 0.0000
18 F A 0.0000
19 E A 0.0000
20 M A 0.0000
21 G A -1.0986
22 L A -0.5269
23 P A -0.9001
24 G A -1.0190
25 S A 0.0000
26 E A -2.2245
27 V A -1.6078
28 E A -1.9223
29 S A 0.0000
30 D A 0.0000
31 W A 0.0000
32 W A 0.0125
33 V A 0.0793
34 W A 0.0000
35 V A 0.0000
36 H A -0.7149
37 D A -0.9705
38 K A -1.7149
39 E A -0.7748
40 N A 0.0000
41 I A -0.3871
42 A A -0.4035
43 S A 0.0000
44 G A -1.0442
45 L A 0.0000
46 V A 0.0000
47 S A -0.5135
48 G A -0.8160
49 D A -0.5931
50 L A -0.0429
51 P A 0.0000
52 E A -1.9105
53 N A -1.3319
54 G A 0.0000
55 P A 0.0000
56 A A 0.0000
57 Y A 0.0000
58 W A 0.0000
59 H A -0.5946
60 L A -0.5280
61 Y A -1.0582
62 K A -1.8976
63 Q A -1.8045
64 D A 0.0000
65 H A 0.0000
66 D A -2.0686
67 I A -1.1333
68 A A 0.0000
69 E A -2.0894
70 K A -2.2567
71 L A 0.0000
72 G A 0.0000
73 M A 0.0000
74 D A -0.7970
75 C A 0.0000
76 I A 0.0000
77 R A 0.0000
78 G A 0.0000
79 G A 0.0000
80 I A 0.0000
81 E A 0.0000
82 W A 0.0000
83 A A 0.0000
84 R A 0.0000
85 I A 0.0000
86 F A 0.0000
87 P A -1.3690
88 K A -1.6471
89 P A -0.7967
90 T A 0.0000
91 F A -0.4101
92 D A -1.8393
93 V A 0.0000
94 K A -2.4669
95 V A -1.8413
96 D A -2.4974
97 V A -1.5307
98 E A -2.5178
99 K A -3.4436
100 D A -3.9677
101 E A -4.0161
102 E A -3.6148
103 G A -2.6290
104 N A -2.0538
105 I A 0.0000
106 I A 0.4374
107 S A -0.8087
108 V A -1.3627
109 D A -2.5645
110 V A 0.0000
111 P A -1.9638
112 E A -2.3616
113 S A -2.4105
114 T A 0.0000
115 I A 0.0000
116 K A -3.8017
117 E A -3.8654
118 L A 0.0000
119 E A -3.4540
120 K A -3.1431
121 I A -2.2038
122 A A -1.9334
123 N A -1.7593
124 M A -1.6123
125 E A -2.3336
126 A A 0.0000
127 L A 0.0000
128 E A -2.7607
129 H A -1.9828
130 Y A 0.0000
131 R A -1.9254
132 K A -2.2163
133 I A 0.0000
134 Y A 0.0000
135 S A -1.7898
136 D A -1.9252
137 W A 0.0000
138 K A -2.2170
139 E A -2.5156
140 R A -2.0615
141 G A -1.6537
142 K A -1.3819
143 T A -0.5528
144 F A 0.0000
145 I A 0.0000
146 L A 0.0000
147 N A 0.0000
148 L A 0.0000
149 Y A 0.0000
150 H A -0.0839
151 W A 0.1080
152 P A 0.0000
153 L A 0.0000
154 P A 0.0000
155 L A -0.3760
156 W A -0.1795
157 I A 0.0000
158 H A 0.0000
159 D A -0.4598
160 P A 0.0000
161 I A -0.0368
162 A A -0.4665
163 V A 0.0000
164 R A 0.0000
165 K A -0.7940
166 L A -0.4833
167 G A 0.0000
168 P A -1.4822
169 D A -2.4209
170 R A -2.0187
171 A A -1.3054
172 P A -0.9576
173 A A 0.0000
174 G A 0.0000
175 W A 0.0000
176 L A 0.0000
177 D A -2.6640
178 E A -2.8299
179 K A -2.0229
180 T A 0.0000
181 V A -0.6468
182 V A -0.6953
183 E A 0.0000
184 F A 0.0000
185 V A 0.0000
186 K A 0.0000
187 F A 0.0000
188 A A 0.0000
189 A A 0.0000
190 F A 0.0000
191 V A 0.0000
192 A A 0.0000
193 Y A -0.1306
194 H A -0.5513
195 L A 0.0000
196 D A -1.5746
197 D A -2.1677
198 L A 0.0000
199 V A 0.0000
200 D A -1.2604
201 M A -0.5846
202 W A 0.0000
203 S A 0.0000
204 T A 0.0000
205 M A 0.0000
206 N A 0.0000
207 E A -0.2551
208 P A 0.0000
209 N A -0.4278
210 V A -0.2028
211 V A 0.0000
212 Y A -0.7705
213 N A -1.0305
214 Q A -0.8533
215 G A 0.0000
216 Y A 0.0000
217 I A 0.0000
218 N A -1.0670
219 L A 0.0000
220 R A -1.6895
221 S A -1.0133
222 G A 0.0000
223 F A 0.0000
224 P A 0.0000
225 P A 0.0000
226 G A -0.4888
227 Y A 0.0000
228 L A 0.0000
229 S A 0.0000
230 F A -0.7874
231 E A -2.1291
232 A A 0.0000
233 A A 0.0000
234 E A -2.5753
235 K A -2.0093
236 A A 0.0000
237 K A -1.3394
238 F A -0.2507
239 N A -0.8792
240 L A 0.0000
241 I A 0.0000
242 Q A 0.0000
243 A A 0.0000
244 H A 0.0000
245 I A 0.0000
246 G A 0.0000
247 A A 0.0000
248 Y A -0.7173
249 D A -1.5714
250 A A 0.0000
251 I A 0.0000
252 K A -1.9042
253 E A -1.6555
254 Y A -0.8723
255 S A 0.0000
256 E A -2.3518
257 K A -1.6124
258 S A -0.9450
259 V A 0.0000
260 G A 0.0000
261 V A 0.0000
262 I A 0.0000
263 Y A 0.0000
264 A A -0.0884
265 F A 0.0000
266 A A -0.0994
267 W A 0.0000
268 H A 0.0000
269 D A -0.4879
270 P A -1.5474
271 L A 0.1040
272 A A -1.3654
273 E A -3.3129
274 E A -3.6934
275 Y A -3.3691
276 K A -4.6986
277 D A -5.0035
278 E A -4.5984
279 V A 0.0000
280 E A -5.0198
281 E A -5.0148
282 I A -3.4335
283 R A 0.0000
284 K A -4.1921
285 K A -4.0266
286 D A -2.9990
287 Y A 0.0000
288 E A -2.2276
289 F A 0.0000
290 V A 0.0000
291 T A -0.7449
292 I A 0.0863
293 L A 0.0000
294 H A -0.8398
295 S A -0.6994
296 K A -1.0333
297 G A -1.0880
298 K A -1.3053
299 L A -0.7325
300 D A -0.6310
301 W A 0.0000
302 I A 0.0000
303 G A 0.0000
304 V A 0.0000
305 N A 0.0000
306 Y A 0.0000
307 Y A 0.2005
308 S A 0.0000
309 R A 0.0444
310 L A 0.6372
311 V A 0.0000
312 Y A 0.0000
313 G A 0.0000
314 A A -1.1922
315 K A -2.7909
316 D A -2.8071
317 G A -2.0619
318 H A -1.3877
319 L A -0.4439
320 V A 1.4019
321 P A 1.0919
322 L A 0.9755
323 P A -0.0604
324 G A -0.6337
325 Y A -0.1181
326 G A 0.0000
327 F A 0.5715
328 M A 0.3240
329 S A 0.0000
330 E A -2.2850
331 R A -2.2605
332 G A -1.2027
333 G A -0.6752
334 F A -0.0223
335 A A -0.8927
336 K A -1.8332
337 S A -0.9376
338 G A -0.7891
339 R A -0.5423
340 P A 0.0000
341 A A 0.0000
342 S A 0.0000
343 D A -1.2927
344 F A -0.2211
345 G A 0.0000
346 W A 0.2296
347 E A 0.0000
348 M A 0.0000
349 Y A -0.1356
350 P A 0.0000
351 E A -1.3632
352 G A 0.0000
353 L A 0.0000
354 E A -1.7764
355 N A -1.9652
356 L A 0.0000
357 L A 0.0000
358 K A -2.1555
359 Y A -1.3376
360 L A 0.0000
361 N A -2.0746
362 N A -1.9871
363 A A -1.3534
364 Y A -1.0825
365 E A -2.3414
366 L A -1.0373
367 P A -0.9160
368 M A 0.0000
369 I A 0.0000
370 I A 0.0000
371 T A 0.0000
372 E A -0.2065
373 N A 0.0000
374 G A 0.0000
375 M A 0.0000
376 A A 0.0000
377 D A -0.7111
378 A A -0.3480
379 A A 0.0000
380 D A 0.0000
381 R A -0.4144
382 Y A 0.0000
383 R A 0.0000
384 P A 0.0000
385 H A 0.0000
386 Y A 0.0000
387 L A 0.0000
388 V A 0.0000
389 S A 0.0000
390 H A 0.0000
391 L A 0.0000
392 K A -0.9067
393 A A 0.0000
394 V A 0.0000
395 Y A -1.2175
396 N A -1.6475
397 A A 0.0000
398 M A -1.8748
399 K A -2.7081
400 E A -3.2167
401 G A -2.1969
402 A A 0.0000
403 D A -1.5974
404 V A 0.0000
405 R A -1.4519
406 G A 0.0000
407 Y A 0.0000
408 L A 0.0000
409 H A 0.0000
410 W A 0.0000
411 S A 0.0000
412 L A 0.0000
413 T A 0.0000
414 D A 0.0000
415 N A 0.0000
416 Y A 0.0000
417 E A -0.6068
418 W A -0.1270
419 A A -0.4883
420 Q A -1.3408
421 G A 0.0000
422 F A -0.7355
423 R A -1.7910
424 M A 0.0000
425 R A -0.7851
426 F A 0.0000
427 G A 0.0000
428 L A 0.0000
429 V A 0.0000
430 Y A -0.3115
431 V A 0.0000
432 D A -1.5838
433 F A 0.0000
434 E A -2.6235
435 T A -1.6751
436 K A -1.8023
437 K A -2.3081
438 R A -1.3769
439 Y A -1.0550
440 L A -0.3409
441 R A 0.0000
442 P A 0.0000
443 S A 0.0000
444 A A 0.0000
445 L A 0.0000
446 V A 0.0000
447 F A 0.0000
448 R A -1.0360
449 E A -0.7019
450 I A 0.0000
451 A A 0.0000
452 T A -1.1708
453 Q A -1.3788
454 K A -1.8680
455 E A -2.1364
456 I A 0.0000
457 P A -1.8092
458 E A -2.3936
459 E A -1.8618
460 L A 0.0000
461 A A -1.1563
462 H A -1.0160
463 L A -0.5353
464 A A -0.8092
465 D A -1.5431
466 L A 0.0000
467 K A -1.8204
468 F A -0.5702
469 V A 0.0000
470 T A -0.6492
1 A B -1.6848
2 K B -2.7113
3 F B 0.0000
4 P B -2.1512
5 K B -2.9689
6 N B -2.4590
7 F B 0.0000
8 M B -0.9806
9 F B 0.0000
10 G B 0.0000
11 Y B 0.0000
12 S B 0.0000
13 W B 0.0000
14 S B 0.0000
15 G B 0.0000
16 F B 0.0000
17 Q B 0.0000
18 F B 0.0000
19 E B 0.0000
20 M B 0.0000
21 G B 0.0000
22 L B -0.5773
23 P B -0.9462
24 G B -1.0397
25 S B 0.0000
26 E B -2.1909
27 V B -1.0795
28 E B -1.1782
29 S B 0.0000
30 D B 0.0000
31 W B 0.0000
32 W B -0.2387
33 V B -0.0024
34 W B 0.0000
35 V B 0.0000
36 H B -1.0443
37 D B -1.1159
38 K B -1.7638
39 E B -1.0055
40 N B 0.0000
41 I B -0.1392
42 A B -0.1717
43 S B 0.0000
44 G B -0.3733
45 L B 0.0000
46 V B 0.0000
47 S B -0.2279
48 G B -0.2774
49 D B -0.5842
50 L B 0.3925
51 P B -0.7000
52 E B -1.9014
53 N B -1.4637
54 G B 0.0000
55 P B 0.0000
56 A B 0.0000
57 Y B 0.0000
58 W B 0.0000
59 H B -0.7100
60 L B -0.6041
61 Y B 0.0000
62 K B -2.7783
63 Q B -2.4630
64 D B 0.0000
65 H B 0.0000
66 D B -2.8195
67 I B 0.0000
68 A B 0.0000
69 E B -2.1492
70 K B -2.3840
71 L B 0.0000
72 G B -1.4676
73 M B 0.0000
74 D B -1.0804
75 C B 0.0000
76 I B 0.0000
77 R B 0.0000
78 G B 0.0000
79 G B 0.0000
80 I B 0.0000
81 E B 0.0000
82 W B 0.0000
83 A B 0.0000
84 R B 0.0000
85 I B 0.0000
86 F B 0.0000
87 P B -0.8294
88 K B -1.3935
89 P B -0.5606
90 T B 0.0000
91 F B -0.2422
92 D B -1.6936
93 V B 0.0000
94 K B -2.4749
95 V B 0.0000
96 D B -2.8504
97 V B -1.7382
98 E B -2.6368
99 K B -2.9747
100 D B -3.3348
101 E B -3.6573
102 E B -3.4545
103 G B -2.4675
104 N B -1.6506
105 I B 0.0000
106 I B 0.5886
107 S B -0.6573
108 V B -1.3476
109 D B -2.5225
110 V B 0.0000
111 P B -1.9210
112 E B -2.2434
113 S B -1.9511
114 T B 0.0000
115 I B 0.0000
116 K B -3.0271
117 E B -3.1496
118 L B 0.0000
119 E B -2.8652
120 K B -2.9505
121 I B -1.9438
122 A B -1.5667
123 N B -1.6515
124 M B -1.7729
125 E B -2.4879
126 A B 0.0000
127 L B 0.0000
128 E B -3.1097
129 H B -2.3661
130 Y B 0.0000
131 R B -2.2267
132 K B -2.7290
133 I B 0.0000
134 Y B 0.0000
135 S B -2.0592
136 D B -2.1320
137 W B 0.0000
138 K B -2.1893
139 E B -2.4227
140 R B -1.9300
141 G B -1.5374
142 K B -1.3557
143 T B -0.7897
144 F B 0.0000
145 I B 0.0000
146 L B 0.0000
147 N B 0.0000
148 L B 0.0000
149 Y B 0.0000
150 H B -0.0856
151 W B 0.0000
152 P B 0.0000
153 L B 0.0000
154 P B 0.0000
155 L B 0.2689
156 W B -0.1034
157 I B 0.0000
158 H B 0.0000
159 D B -0.4215
160 P B 0.0000
161 I B -0.0345
162 A B -0.4789
163 V B 0.0000
164 R B 0.0000
165 K B -0.1840
166 L B 0.0269
167 G B 0.0000
168 P B -1.5725
169 D B -2.7600
170 R B -2.5452
171 A B -1.4456
172 P B -0.9567
173 A B 0.0000
174 G B 0.0000
175 W B 0.0000
176 L B 0.0000
177 D B -2.3867
178 E B -2.6908
179 K B -1.8998
180 T B 0.0000
181 V B -0.5863
182 V B -0.7331
183 E B 0.0000
184 F B 0.0000
185 V B 0.0000
186 K B 0.0000
187 F B 0.0000
188 A B 0.0000
189 A B 0.0000
190 F B 0.0000
191 V B 0.0000
192 A B 0.0000
193 Y B -0.2398
194 H B -0.6008
195 L B 0.0000
196 D B -1.5504
197 D B -2.1521
198 L B 0.0000
199 V B 0.0000
200 D B -1.0964
201 M B -0.5720
202 W B 0.0000
203 S B 0.0000
204 T B 0.0000
205 M B 0.0000
206 N B 0.0000
207 E B 0.0000
208 P B 0.0000
209 N B -0.4043
210 V B 0.0291
211 V B -0.1114
212 Y B 0.0000
213 N B -0.9567
214 Q B -0.8546
215 G B 0.0000
216 Y B 0.0000
217 I B -0.7535
218 N B -1.0897
219 L B 0.0000
220 R B -2.2849
221 S B -1.2660
222 G B 0.0000
223 F B 0.0000
224 P B -0.0770
225 P B 0.0000
226 G B -0.2433
227 Y B -0.1151
228 L B 0.0000
229 S B -1.3056
230 F B -1.4212
231 E B -2.6286
232 A B 0.0000
233 A B 0.0000
234 E B -2.8908
235 K B -2.2878
236 A B 0.0000
237 K B -1.3432
238 F B 0.0757
239 N B -0.5028
240 L B 0.0000
241 I B 0.4876
242 Q B 0.0000
243 A B 0.0000
244 H B 0.0000
245 I B 0.0000
246 G B 0.0000
247 A B 0.0000
248 Y B -0.4409
249 D B -1.0025
250 A B 0.0000
251 I B 0.0000
252 K B -1.7513
253 E B -1.8982
254 Y B -0.9495
255 S B 0.0000
256 E B -2.3070
257 K B -1.6084
258 S B -0.9580
259 V B 0.0000
260 G B 0.0000
261 V B 0.0000
262 I B 0.0000
263 Y B 0.0000
264 A B 0.0148
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230 F D -0.6816
231 E D -2.2407
232 A D 0.0000
233 A D -1.3854
234 E D -2.6115
235 K D -2.4106
236 A D 0.0000
237 K D -1.2428
238 F D -0.2171
239 N D -0.7118
240 L D 0.0000
241 I D 0.0000
242 Q D 0.0000
243 A D 0.0000
244 H D 0.0000
245 I D 0.0000
246 G D 0.0000
247 A D 0.0000
248 Y D 0.0000
249 D D -1.1665
250 A D 0.0000
251 I D 0.0000
252 K D -1.9258
253 E D -2.0623
254 Y D -1.0868
255 S D 0.0000
256 E D -2.3583
257 K D -1.6033
258 S D -0.9370
259 V D 0.0000
260 G D 0.0000
261 V D 0.0000
262 I D 0.0000
263 Y D 0.0000
264 A D -0.0652
265 F D 0.0000
266 A D 0.0754
267 W D 0.0000
268 H D 0.0000
269 D D -0.3515
270 P D -1.1707
271 L D 0.3471
272 A D -1.1305
273 E D -3.3615
274 E D -3.3375
275 Y D -2.8249
276 K D -4.0022
277 D D -4.7197
278 E D -4.3962
279 V D 0.0000
280 E D -4.1580
281 E D -4.6398
282 I D -3.4015
283 R D 0.0000
284 K D -3.9883
285 K D -3.9466
286 D D -2.9400
287 Y D 0.0000
288 E D -2.6311
289 F D 0.0000
290 V D 0.0000
291 T D -1.3042
292 I D -0.5350
293 L D 0.0000
294 H D -1.6291
295 S D -1.2251
296 K D -1.6110
297 G D -1.3976
298 K D -1.2456
299 L D -0.6983
300 D D -0.5781
301 W D 0.0000
302 I D 0.0000
303 G D 0.0000
304 V D 0.0000
305 N D 0.0000
306 Y D 0.0000
307 Y D 0.4675
308 S D 0.0000
309 R D 0.0000
310 L D 0.7256
311 V D 0.0000
312 Y D 0.0000
313 G D 0.0000
314 A D -1.5424
315 K D -2.8124
316 D D -3.0239
317 G D -2.5170
318 H D -1.8608
319 L D -1.2008
320 V D -0.0714
321 P D 0.4205
322 L D 0.3732
323 P D -0.1816
324 G D -0.4588
325 Y D -0.0200
326 G D 0.0000
327 F D 1.0898
328 M D 0.4888
329 S D -0.7584
330 E D -2.3390
331 R D -2.5587
332 G D -1.7189
333 G D -0.9641
334 F D -0.1163
335 A D 0.0000
336 K D -1.8436
337 S D -0.9835
338 G D -0.7178
339 R D -0.2091
340 P D 0.0000
341 A D 0.0000
342 S D 0.0000
343 D D -1.4575
344 F D -0.5268
345 G D 0.0000
346 W D 0.3481
347 E D 0.0000
348 M D 0.0000
349 Y D 0.0191
350 P D 0.0000
351 E D -1.0499
352 G D 0.0000
353 L D 0.0000
354 E D -1.5617
355 N D -1.3559
356 L D 0.0000
357 L D 0.0000
358 K D -1.9467
359 Y D -1.0343
360 L D 0.0000
361 N D -1.9861
362 N D -2.0050
363 A D -1.3412
364 Y D 0.0000
365 E D -2.4168
366 L D -1.2419
367 P D -0.8548
368 M D 0.0000
369 I D 0.0000
370 I D 0.0000
371 T D 0.0000
372 E D 0.0000
373 N D 0.0000
374 G D 0.0000
375 M D 0.0000
376 A D 0.0000
377 D D 0.0000
378 A D -0.4865
379 A D 0.0000
380 D D 0.0000
381 R D -0.6459
382 Y D 0.0000
383 R D 0.0000
384 P D 0.0000
385 H D 0.0000
386 Y D 0.0000
387 L D 0.0000
388 V D 0.0000
389 S D 0.0000
390 H D 0.0000
391 L D 0.0000
392 K D -0.8085
393 A D 0.0000
394 V D 0.0000
395 Y D -1.3372
396 N D -2.0834
397 A D 0.0000
398 M D -2.0516
399 K D -2.9735
400 E D -3.2350
401 G D -2.4294
402 A D 0.0000
403 D D -1.8225
404 V D 0.0000
405 R D -1.2566
406 G D 0.0000
407 Y D 0.0000
408 L D 0.0000
409 H D 0.0000
410 W D 0.1187
411 S D 0.0000
412 L D 0.0000
413 T D 0.0000
414 D D 0.0000
415 N D 0.0000
416 Y D 0.0000
417 E D -0.6722
418 W D 0.0000
419 A D 0.0000
420 Q D -1.0181
421 G D 0.0000
422 F D -1.0735
423 R D -1.9552
424 M D -0.9728
425 R D -0.6330
426 F D 0.0000
427 G D 0.0000
428 L D 0.0000
429 V D 0.0000
430 Y D 0.0000
431 V D 0.0000
432 D D -1.6010
433 F D 0.0000
434 E D -2.4547
435 T D -1.8260
436 K D -1.6876
437 K D -2.1731
438 R D -1.4127
439 Y D -1.0470
440 L D -0.3050
441 R D 0.0000
442 P D 0.0000
443 S D 0.0000
444 A D 0.0000
445 L D 0.0000
446 V D 0.0000
447 F D 0.0000
448 R D -1.1572
449 E D -0.7816
450 I D 0.0000
451 A D 0.0000
452 T D -1.3180
453 Q D -1.6587
454 K D -1.8908
455 E D -1.9263
456 I D -1.2263
457 P D -1.5058
458 E D -2.0900
459 E D -1.5670
460 L D 0.0000
461 A D -0.8984
462 H D -0.9925
463 L D 0.0000
464 A D -0.6091
465 D D -1.1147
466 L D -0.7779
467 K D -1.7623
468 F D 0.0000
469 V D -0.4547
470 T D -0.6047
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.6129 2.8294 View CSV PDB
4.5 -0.6899 2.793 View CSV PDB
5.0 -0.7867 2.7435 View CSV PDB
5.5 -0.885 2.6892 View CSV PDB
6.0 -0.9646 2.6386 View CSV PDB
6.5 -1.0095 2.6 View CSV PDB
7.0 -1.0169 2.5779 View CSV PDB
7.5 -0.9976 2.5685 View CSV PDB
8.0 -0.9636 2.5651 View CSV PDB
8.5 -0.9203 2.564 View CSV PDB
9.0 -0.8686 2.5635 View CSV PDB