CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Feb-19 06:33:20 UTC
Project NameAd
SequenceMPIMGSSVYI TVELAIAVLA ILGNVLVCWA VWLNSNLQNV TNYFVVSLAA ADIAVGVLAI PFAITISTGF CAACHGCLFI ACFVLVLTQS SIFSLLAIAI DRYIAIRIPL RYNGLVTGTR AKGIIAICWV LSFAIGLTPM LGWNNCGQPK EGKNHSQGCG EGQVACLFED VVPMNYMVYF NFFACVLVPL LLMLGVYLRI FLAARRQLKQ MESQPLPGER ARSTLQKEVH AAKSLAIIVG LFALCWLPLH IINCFTFFCP DCSHAPLWLM YLAIVLSHTN SVVNPFIYAY RIREFRQTFR KIIRSHVLRQ Q
Secondary structure

CCCCCHHHHH HHHHHHHHHH HHHHHHHHHH HHHCCCCCCC HHHHHHHHHH HHHHHHHCHH HHHHHHHHCC CCCHHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHCCC CHHHHCCHHH HHHHHHHHHH HHHHHHHHHH HHCCCCCCHH HHCCCCCCCC CCCCCCCCCC CCCCHHHHCC CCCCCCHHHH HHHHHHHHHH HHHHHCCCCC CCCCCCCCCC CCCCCCCCCC HHHHHHHHHH HHHHHHHHHH HHHHHHHHCC CCCCCCHHHH HHHHHHHHHH HHHHHHHHHH HCHHHHHHHH HHHHHCCCCC C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Feb-19 10:33 UTC
Project NameAd
Clustering data
Cluster #123456789101112
Cluster density220.0186.1166.7158.0156.6139.1113.687.466.550.042.638.6
Cluster size30327224321124518115213697525652
Average cluster RMSD1.41.51.51.31.61.31.31.61.51.01.31.3

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 4.75 4.70 4.54 4.42 4.34 4.78 4.41 4.24 4.29 4.99 4.66 4.51
GDT_TS 0.55 0.57 0.57 0.59 0.56 0.54 0.56 0.58 0.62 0.57 0.55 0.61

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.73 1.88 1.93 2.06 2.23 2.33 2.15 2.50 1.73 2.74 2.95
2 1.73 0.00 2.00 2.11 2.32 2.24 2.45 2.49 2.53 1.67 2.95 3.28
3 1.88 2.00 0.00 1.80 2.07 2.35 2.75 2.28 2.45 2.15 2.56 3.12
4 1.93 2.11 1.80 0.00 2.21 2.64 2.48 2.34 2.32 2.15 2.55 2.73
5 2.06 2.32 2.07 2.21 0.00 2.49 2.55 1.77 2.43 2.46 2.78 3.06
6 2.23 2.24 2.35 2.64 2.49 0.00 2.74 2.31 2.69 2.53 3.09 3.33
7 2.33 2.45 2.75 2.48 2.55 2.74 0.00 2.76 2.86 2.44 2.84 2.82
8 2.15 2.49 2.28 2.34 1.77 2.31 2.76 0.00 2.47 2.74 2.85 3.02
9 2.50 2.53 2.45 2.32 2.43 2.69 2.86 2.47 0.00 2.62 3.05 2.63
10 1.73 1.67 2.15 2.15 2.46 2.53 2.44 2.74 2.62 0.00 2.92 3.28
11 2.74 2.95 2.56 2.55 2.78 3.09 2.84 2.85 3.05 2.92 0.00 3.28
12 2.95 3.28 3.12 2.73 3.06 3.33 2.82 3.02 2.63 3.28 3.28 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.82 0.81 0.77 0.78 0.79 0.76 0.80 0.72 0.83 0.77 0.69
2 0.82 1.00 0.79 0.77 0.76 0.78 0.77 0.75 0.73 0.86 0.76 0.67
3 0.81 0.79 1.00 0.82 0.81 0.75 0.75 0.79 0.73 0.79 0.75 0.68
4 0.77 0.77 0.82 1.00 0.79 0.72 0.74 0.81 0.74 0.77 0.73 0.70
5 0.78 0.76 0.81 0.79 1.00 0.74 0.74 0.82 0.74 0.75 0.73 0.71
6 0.79 0.78 0.75 0.72 0.74 1.00 0.76 0.75 0.71 0.77 0.76 0.69
7 0.76 0.77 0.75 0.74 0.74 0.76 1.00 0.73 0.71 0.77 0.75 0.68
8 0.80 0.75 0.79 0.81 0.82 0.75 0.73 1.00 0.74 0.74 0.74 0.71
9 0.72 0.73 0.73 0.74 0.74 0.71 0.71 0.74 1.00 0.73 0.69 0.77
10 0.83 0.86 0.79 0.77 0.75 0.77 0.77 0.74 0.73 1.00 0.76 0.67
11 0.77 0.76 0.75 0.73 0.73 0.76 0.75 0.74 0.69 0.76 1.00 0.68
12 0.69 0.67 0.68 0.70 0.71 0.69 0.68 0.71 0.77 0.67 0.68 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013