CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Jun-25 06:58:17 UTC
Project Name
SequenceTCSKKYPRSP CM
Secondary structure

CCCCCCCCCC CC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Jun-25 11:18 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density127.4112.883.179.375.274.766.958.756.155.555.352.5
Cluster size286287148177149170135130117134130137
Average cluster RMSD2.22.51.82.22.02.32.02.22.12.42.42.6

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 6.31 7.22 1.70 4.40 2.72 3.40 3.27 4.82 4.00 7.46 6.31 5.35
GDT_TS 0.44 0.46 0.81 0.69 0.83 0.69 0.75 0.67 0.77 0.58 0.62 0.62

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 2.91 5.48 3.50 4.85 4.20 4.99 4.99 4.63 4.96 4.06 4.52
2 2.91 0.00 6.34 4.32 5.37 4.74 5.22 4.20 5.11 3.44 4.18 3.85
3 5.48 6.34 0.00 3.82 2.38 2.74 2.85 4.08 3.52 6.55 5.58 4.27
4 3.50 4.32 3.82 0.00 3.10 3.26 3.53 4.28 2.80 5.35 2.95 3.24
5 4.85 5.37 2.38 3.10 0.00 2.42 2.80 3.73 1.87 5.84 4.33 3.67
6 4.20 4.74 2.74 3.26 2.42 0.00 2.85 3.28 2.99 4.97 4.29 3.35
7 4.99 5.22 2.85 3.53 2.80 2.85 0.00 3.03 3.72 5.36 4.93 3.49
8 4.99 4.20 4.08 4.28 3.73 3.28 3.03 0.00 4.42 3.54 4.73 2.88
9 4.63 5.11 3.52 2.80 1.87 2.99 3.72 4.42 0.00 5.65 3.45 3.43
10 4.96 3.44 6.55 5.35 5.84 4.97 5.36 3.54 5.65 0.00 4.45 3.70
11 4.06 4.18 5.58 2.95 4.33 4.29 4.93 4.73 3.45 4.45 0.00 3.34
12 4.52 3.85 4.27 3.24 3.67 3.35 3.49 2.88 3.43 3.70 3.34 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.83 0.46 0.69 0.54 0.52 0.46 0.54 0.54 0.52 0.54 0.50
2 0.83 1.00 0.46 0.67 0.54 0.46 0.52 0.56 0.58 0.65 0.54 0.54
3 0.46 0.46 1.00 0.69 0.77 0.71 0.73 0.67 0.73 0.60 0.69 0.65
4 0.69 0.67 0.69 1.00 0.75 0.56 0.62 0.52 0.77 0.50 0.75 0.65
5 0.54 0.54 0.77 0.75 1.00 0.71 0.67 0.71 0.81 0.65 0.71 0.65
6 0.52 0.46 0.71 0.56 0.71 1.00 0.67 0.69 0.65 0.54 0.54 0.67
7 0.46 0.52 0.73 0.62 0.67 0.67 1.00 0.73 0.62 0.56 0.60 0.60
8 0.54 0.56 0.67 0.52 0.71 0.69 0.73 1.00 0.58 0.65 0.52 0.65
9 0.54 0.58 0.73 0.77 0.81 0.65 0.62 0.58 1.00 0.58 0.71 0.65
10 0.52 0.65 0.60 0.50 0.65 0.54 0.56 0.65 0.58 1.00 0.52 0.58
11 0.54 0.54 0.69 0.75 0.71 0.54 0.60 0.52 0.71 0.52 1.00 0.65
12 0.50 0.54 0.65 0.65 0.65 0.67 0.60 0.65 0.65 0.58 0.65 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013