CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-May-11 07:48:20 UTC
Project Namev1s1
SequenceMISDALSNDS LAAESGAFIE VGPDNRLPLQ T
Secondary structure

CCCCCCCCCC CCCCCCCCCC CCCCCHHHHH C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-May-11 12:11 UTC
Project Namev1s1
Clustering data
Cluster #123456789101112
Cluster density198.585.483.982.578.275.265.657.857.051.340.733.3
Cluster size3621961571831931741611591281259567
Average cluster RMSD1.82.31.92.22.52.32.52.82.22.42.32.0

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 8.17 8.59 8.49 8.56 8.89 9.29 8.71 8.63 8.76 8.67 8.20 8.21
GDT_TS 0.39 0.41 0.41 0.42 0.41 0.42 0.41 0.43 0.41 0.43 0.40 0.41

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 3.94 1.88 3.28 2.91 3.38 4.69 3.59 4.81 4.24 4.99 5.59
2 3.94 0.00 3.85 2.93 3.78 3.08 2.20 3.06 2.08 2.89 4.11 3.49
3 1.88 3.85 0.00 3.60 2.89 3.18 4.62 3.44 4.71 4.31 4.65 5.81
4 3.28 2.93 3.60 0.00 3.74 3.12 3.58 2.08 3.55 2.47 4.49 4.04
5 2.91 3.78 2.89 3.74 0.00 2.65 4.20 3.30 4.10 4.14 4.14 5.26
6 3.38 3.08 3.18 3.12 2.65 0.00 3.38 2.64 3.49 3.38 3.46 4.71
7 4.69 2.20 4.62 3.58 4.20 3.38 0.00 3.42 2.12 3.05 4.08 3.21
8 3.59 3.06 3.44 2.08 3.30 2.64 3.42 0.00 3.07 2.05 3.53 3.99
9 4.81 2.08 4.71 3.55 4.10 3.49 2.12 3.07 0.00 2.67 3.72 2.57
10 4.24 2.89 4.31 2.47 4.14 3.38 3.05 2.05 2.67 0.00 4.23 2.97
11 4.99 4.11 4.65 4.49 4.14 3.46 4.08 3.53 3.72 4.23 0.00 4.28
12 5.59 3.49 5.81 4.04 5.26 4.71 3.21 3.99 2.57 2.97 4.28 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.62 0.79 0.66 0.64 0.67 0.53 0.60 0.55 0.54 0.52 0.45
2 0.62 1.00 0.59 0.70 0.60 0.66 0.74 0.65 0.77 0.63 0.56 0.59
3 0.79 0.59 1.00 0.61 0.65 0.67 0.53 0.61 0.54 0.56 0.52 0.43
4 0.66 0.70 0.61 1.00 0.59 0.66 0.63 0.75 0.60 0.68 0.56 0.55
5 0.64 0.60 0.65 0.59 1.00 0.68 0.60 0.61 0.60 0.58 0.60 0.47
6 0.67 0.66 0.67 0.66 0.68 1.00 0.60 0.69 0.57 0.62 0.63 0.51
7 0.53 0.74 0.53 0.63 0.60 0.60 1.00 0.61 0.79 0.66 0.57 0.66
8 0.60 0.65 0.61 0.75 0.61 0.69 0.61 1.00 0.63 0.77 0.61 0.56
9 0.55 0.77 0.54 0.60 0.60 0.57 0.79 0.63 1.00 0.69 0.65 0.69
10 0.54 0.63 0.56 0.68 0.58 0.62 0.66 0.77 0.69 1.00 0.57 0.62
11 0.52 0.56 0.52 0.56 0.60 0.63 0.57 0.61 0.65 0.57 1.00 0.57
12 0.45 0.59 0.43 0.55 0.47 0.51 0.66 0.56 0.69 0.62 0.57 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013