CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Mar-05 05:22:31 UTC
Project Namewild_cp
SequenceEHLGILGPQL HADVGDKVKI IFKNMATRPY SIHAHGVQTE SSTVTPTLPG ETLTYVWKIP ERSGAGTEDS ACIPWAYYST VDQVKDLYSG LIGPLIVCRR P
Secondary structure

CCCCCCCCCE EEECCCEEEE EEECCCCCCC CCEECCCCCC CCCCCCCCCC CEEEEEEECC CCCCCCCCCC CEEEEEEECC CCHHHHHHCC CEEEEEEECC C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Mar-05 08:54 UTC
Project Namewild_cp
Clustering data
Cluster #123456789101112
Cluster density136.6136.3121.0111.397.895.788.183.881.078.468.253.6
Cluster size202226202220152157159170136139119118
Average cluster RMSD1.51.71.72.01.61.61.82.01.71.81.72.2

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 4.21 3.86 4.06 3.79 4.20 4.26 4.67 3.65 3.99 3.35 4.10 3.91
GDT_TS 0.68 0.63 0.66 0.62 0.72 0.67 0.66 0.65 0.65 0.69 0.64 0.68

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 4.94 4.87 4.38 2.76 2.66 2.02 4.24 4.72 3.62 5.08 3.45
2 4.94 0.00 2.05 2.10 4.79 4.38 5.02 2.49 2.30 2.76 2.01 2.98
3 4.87 2.05 0.00 2.17 4.40 3.89 4.76 2.15 1.96 2.33 1.73 2.48
4 4.38 2.10 2.17 0.00 4.38 3.96 4.45 2.55 1.99 2.58 2.22 2.75
5 2.76 4.79 4.40 4.38 0.00 2.23 2.96 4.17 4.43 3.57 4.50 3.16
6 2.66 4.38 3.89 3.96 2.23 0.00 2.61 3.55 4.03 2.97 4.18 2.77
7 2.02 5.02 4.76 4.45 2.96 2.61 0.00 4.28 4.70 3.77 5.10 3.33
8 4.24 2.49 2.15 2.55 4.17 3.55 4.28 0.00 2.44 2.41 2.44 2.26
9 4.72 2.30 1.96 1.99 4.43 4.03 4.70 2.44 0.00 2.56 1.85 2.64
10 3.62 2.76 2.33 2.58 3.57 2.97 3.77 2.41 2.56 0.00 2.60 2.42
11 5.08 2.01 1.73 2.22 4.50 4.18 5.10 2.44 1.85 2.60 0.00 2.79
12 3.45 2.98 2.48 2.75 3.16 2.77 3.33 2.26 2.64 2.42 2.79 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.70 0.78 0.72 0.76 0.76 0.77 0.75 0.75 0.74 0.71 0.78
2 0.70 1.00 0.76 0.76 0.64 0.67 0.68 0.75 0.78 0.70 0.77 0.73
3 0.78 0.76 1.00 0.71 0.73 0.79 0.78 0.80 0.76 0.80 0.79 0.85
4 0.72 0.76 0.71 1.00 0.64 0.64 0.67 0.72 0.78 0.68 0.71 0.71
5 0.76 0.64 0.73 0.64 1.00 0.76 0.72 0.68 0.69 0.70 0.68 0.74
6 0.76 0.67 0.79 0.64 0.76 1.00 0.76 0.74 0.71 0.75 0.69 0.79
7 0.77 0.68 0.78 0.67 0.72 0.76 1.00 0.75 0.70 0.75 0.71 0.76
8 0.75 0.75 0.80 0.72 0.68 0.74 0.75 1.00 0.75 0.74 0.76 0.80
9 0.75 0.78 0.76 0.78 0.69 0.71 0.70 0.75 1.00 0.76 0.82 0.76
10 0.74 0.70 0.80 0.68 0.70 0.75 0.75 0.74 0.76 1.00 0.75 0.76
11 0.71 0.77 0.79 0.71 0.68 0.69 0.71 0.76 0.82 0.75 1.00 0.77
12 0.78 0.73 0.85 0.71 0.74 0.79 0.76 0.80 0.76 0.76 0.77 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013