CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-26 05:09:10 UTC
Project NameAbrinAdocked
SequenceEDRPIKFSTE GATSQSYKQF IEALRERLRG GLIHDIPVLP DPTTLQERNR YITVELSNSD TESIEVGIDV TNAYVVAYRA GTQSYFLRDA PSSASDYLFT GTDQHSLPFY GTYGDLERWA HQSRQQIPLG LQALTHGISF FRSGGNDNEE KARTLIVIIQ MVAEAARFRY ISNRVRVSIQ TGTAFQPDAA MISLENNWDN LSRGVQESVQ DTFPNQVTLT NIRNEPVIVD SLSHPTVAVL ALMLFVCNPP N
Secondary structure

CCCCEEEECC CCCHHHHHHH HHHHHHHHCC CEECCEECCC CCCCCCCCCC EEEEEEECCC CCEEEEEEEC CCCCEEEEEC CCEEEECCCC CCCHHHHCCC CCEEEECCCC CCCCHHHHHC CCCCCCCCCC HHHHHHHHHH HHCCCCCHHH HHHHHHHHHH HHHHHHHCHH HHHHHHHHHH CCCCCCCCHH HHHHHHCHHH HHHHHHHCCC CEEEEEEEEE CCCCCEEEEE ECCCCCCCCC CCCCCCCCCC C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-26 10:01 UTC
Project NameAbrinAdocked
Clustering data
Cluster #123456789101112
Cluster density201.6167.1151.8145.3135.1130.8116.299.991.975.760.857.5
Cluster size272229230193185203155135126949781
Average cluster RMSD1.31.41.51.31.41.61.31.41.41.21.61.4

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.92 2.67 3.36 3.06 3.16 3.20 3.35 2.77 3.21 3.30 3.36 2.82
GDT_TS 0.65 0.66 0.64 0.66 0.66 0.65 0.66 0.64 0.67 0.66 0.63 0.68

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 2.35 2.44 2.08 1.83 2.53 2.14 2.01 1.56 2.33 2.53 2.82
2 2.35 0.00 2.77 2.35 2.47 2.88 2.76 2.09 2.66 2.52 2.73 2.43
3 2.44 2.77 0.00 2.24 2.49 2.05 2.31 2.58 2.61 2.29 1.38 2.55
4 2.08 2.35 2.24 0.00 2.28 2.24 1.74 2.07 2.28 2.19 2.37 2.24
5 1.83 2.47 2.49 2.28 0.00 2.61 2.14 2.42 2.00 2.35 2.52 2.89
6 2.53 2.88 2.05 2.24 2.61 0.00 2.46 2.69 2.68 2.64 2.01 2.51
7 2.14 2.76 2.31 1.74 2.14 2.46 0.00 2.39 2.24 2.16 2.47 2.58
8 2.01 2.09 2.58 2.07 2.42 2.69 2.39 0.00 2.20 2.34 2.62 2.47
9 1.56 2.66 2.61 2.28 2.00 2.68 2.24 2.20 0.00 2.45 2.70 3.14
10 2.33 2.52 2.29 2.19 2.35 2.64 2.16 2.34 2.45 0.00 2.38 2.44
11 2.53 2.73 1.38 2.37 2.52 2.01 2.47 2.62 2.70 2.38 0.00 2.53
12 2.82 2.43 2.55 2.24 2.89 2.51 2.58 2.47 3.14 2.44 2.53 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.74 0.69 0.75 0.78 0.70 0.73 0.79 0.85 0.72 0.68 0.71
2 0.74 1.00 0.69 0.75 0.75 0.72 0.70 0.73 0.75 0.71 0.69 0.70
3 0.69 0.69 1.00 0.72 0.68 0.75 0.72 0.69 0.68 0.73 0.86 0.72
4 0.75 0.75 0.72 1.00 0.70 0.75 0.80 0.78 0.74 0.75 0.70 0.77
5 0.78 0.75 0.68 0.70 1.00 0.68 0.72 0.72 0.77 0.71 0.68 0.69
6 0.70 0.72 0.75 0.75 0.68 1.00 0.71 0.70 0.69 0.69 0.76 0.72
7 0.73 0.70 0.72 0.80 0.72 0.71 1.00 0.71 0.74 0.76 0.70 0.76
8 0.79 0.73 0.69 0.78 0.72 0.70 0.71 1.00 0.78 0.72 0.68 0.71
9 0.85 0.75 0.68 0.74 0.77 0.69 0.74 0.78 1.00 0.72 0.66 0.69
10 0.72 0.71 0.73 0.75 0.71 0.69 0.76 0.72 0.72 1.00 0.73 0.76
11 0.68 0.69 0.86 0.70 0.68 0.76 0.70 0.68 0.66 0.73 1.00 0.71
12 0.71 0.70 0.72 0.77 0.69 0.72 0.76 0.71 0.69 0.76 0.71 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013