Download models Download Cα trajectory
Status: Done started: 2018-Apr-02 14:16:18 UTC
Project NameIM42
SequenceLLLGIGILVL LIIVILGVPL MIFT
Secondary structure

CHHHHHHHHH HHHHHHCCCH HHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-02 18:38 UTC
Project NameIM42
Cluster #1234
Cluster density1079.7446.0137.6120.4
Cluster size1010680164146
Average cluster RMSD0.91.51.21.2

Read about clustering method.

#1234
RMSD 3.79 7.81 4.59 5.08
GDT_TS 0.73 0.53 0.73 0.58

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#1234
1 0.00 5.74 1.68 3.10
2 5.74 0.00 5.26 4.27
3 1.68 5.26 0.00 2.98
4 3.10 4.27 2.98 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#1234
1 1.00 0.67 0.96 0.83
2 0.67 1.00 0.69 0.71
3 0.96 0.69 1.00 0.82
4 0.83 0.71 0.82 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013