CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-May-29 13:00:22 UTC
Project Name
SequenceARECKTESNT FPGICITKPP CRKACISEKF TDGHCSKILR RCLCTKPC
Secondary structure

CCEEEEECCC CCCCCCCHHH HHHHHHHCCC CEEEECCCCC CEEEEEEC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-May-29 17:25 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density197.6172.2171.7151.4143.9140.6130.7121.5111.956.856.340.6
Cluster size247211224198194206173168162828154
Average cluster RMSD1.31.21.31.31.31.51.31.41.41.41.41.3

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.08 1.94 2.29 2.53 2.15 2.52 2.71 2.13 2.57 2.74 2.64 2.36
GDT_TS 0.78 0.77 0.76 0.73 0.81 0.79 0.74 0.81 0.77 0.76 0.72 0.76

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.27 1.41 1.62 1.42 1.63 1.80 1.03 1.70 2.33 2.10 1.93
2 1.27 0.00 1.64 1.67 1.52 1.91 1.92 1.28 1.81 2.65 2.31 2.20
3 1.41 1.64 0.00 1.37 1.19 1.52 1.45 1.73 2.01 2.01 1.77 2.17
4 1.62 1.67 1.37 0.00 1.35 1.46 1.36 1.55 1.66 2.22 1.80 2.25
5 1.42 1.52 1.19 1.35 0.00 1.44 1.51 1.53 1.89 2.12 1.73 2.25
6 1.63 1.91 1.52 1.46 1.44 0.00 1.50 1.54 1.48 2.23 2.04 2.35
7 1.80 1.92 1.45 1.36 1.51 1.50 0.00 1.73 2.14 2.49 1.95 2.55
8 1.03 1.28 1.73 1.55 1.53 1.54 1.73 0.00 1.60 2.34 2.17 1.89
9 1.70 1.81 2.01 1.66 1.89 1.48 2.14 1.60 0.00 2.62 2.35 2.20
10 2.33 2.65 2.01 2.22 2.12 2.23 2.49 2.34 2.62 0.00 1.60 1.84
11 2.10 2.31 1.77 1.80 1.73 2.04 1.95 2.17 2.35 1.60 0.00 1.82
12 1.93 2.20 2.17 2.25 2.25 2.35 2.55 1.89 2.20 1.84 1.82 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.89 0.90 0.87 0.87 0.88 0.86 0.93 0.85 0.79 0.80 0.81
2 0.89 1.00 0.89 0.88 0.87 0.85 0.86 0.87 0.85 0.80 0.81 0.79
3 0.90 0.89 1.00 0.89 0.90 0.90 0.88 0.86 0.84 0.82 0.84 0.80
4 0.87 0.88 0.89 1.00 0.86 0.85 0.87 0.89 0.88 0.80 0.84 0.81
5 0.87 0.87 0.90 0.86 1.00 0.89 0.88 0.89 0.84 0.79 0.83 0.76
6 0.88 0.85 0.90 0.85 0.89 1.00 0.88 0.91 0.87 0.83 0.83 0.78
7 0.86 0.86 0.88 0.87 0.88 0.88 1.00 0.84 0.85 0.79 0.87 0.77
8 0.93 0.87 0.86 0.89 0.89 0.91 0.84 1.00 0.89 0.84 0.82 0.83
9 0.85 0.85 0.84 0.88 0.84 0.87 0.85 0.89 1.00 0.79 0.80 0.81
10 0.79 0.80 0.82 0.80 0.79 0.83 0.79 0.84 0.79 1.00 0.80 0.88
11 0.80 0.81 0.84 0.84 0.83 0.83 0.87 0.82 0.80 0.80 1.00 0.82
12 0.81 0.79 0.80 0.81 0.76 0.78 0.77 0.83 0.81 0.88 0.82 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013