CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-May-11 07:50:20 UTC
Project Namev3s3
SequenceMTSHLVSRPL ALSRSPFLLM GGSSNISSL
Secondary structure

CCCHHHHCCC CCCCCCCCCC CCCCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-May-11 12:13 UTC
Project Namev3s3
Clustering data
Cluster #123456789101112
Cluster density160.4156.0143.9123.9123.3109.390.085.669.664.056.942.5
Cluster size2632392271961891741551511261118980
Average cluster RMSD1.61.51.61.61.51.61.71.81.81.71.61.9

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 4.05 4.32 4.16 4.01 3.82 4.30 3.71 4.18 3.78 3.99 3.38 3.92
GDT_TS 0.61 0.60 0.60 0.59 0.59 0.58 0.62 0.60 0.64 0.59 0.64 0.65

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.34 1.33 2.09 2.05 2.13 2.11 1.39 2.06 2.28 2.08 2.15
2 1.34 0.00 1.23 1.97 2.11 2.29 2.12 1.61 2.49 2.10 2.40 2.66
3 1.33 1.23 0.00 2.02 2.08 2.09 2.10 1.33 2.35 2.13 2.34 2.37
4 2.09 1.97 2.02 0.00 1.71 2.10 1.48 2.33 2.17 1.58 1.98 2.18
5 2.05 2.11 2.08 1.71 0.00 2.15 1.83 2.11 2.25 1.76 1.54 2.12
6 2.13 2.29 2.09 2.10 2.15 0.00 2.30 2.19 2.04 2.03 2.50 2.27
7 2.11 2.12 2.10 1.48 1.83 2.30 0.00 2.09 2.35 2.02 2.01 2.19
8 1.39 1.61 1.33 2.33 2.11 2.19 2.09 0.00 2.22 2.42 2.45 2.00
9 2.06 2.49 2.35 2.17 2.25 2.04 2.35 2.22 0.00 2.31 2.19 1.31
10 2.28 2.10 2.13 1.58 1.76 2.03 2.02 2.42 2.31 0.00 2.31 2.42
11 2.08 2.40 2.34 1.98 1.54 2.50 2.01 2.45 2.19 2.31 0.00 2.13
12 2.15 2.66 2.37 2.18 2.12 2.27 2.19 2.00 1.31 2.42 2.13 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.85 0.87 0.76 0.75 0.78 0.80 0.89 0.79 0.78 0.78 0.78
2 0.85 1.00 0.89 0.80 0.78 0.78 0.79 0.82 0.74 0.81 0.78 0.72
3 0.87 0.89 1.00 0.79 0.77 0.80 0.78 0.85 0.77 0.77 0.77 0.78
4 0.76 0.80 0.79 1.00 0.81 0.77 0.86 0.80 0.79 0.80 0.80 0.79
5 0.75 0.78 0.77 0.81 1.00 0.78 0.78 0.77 0.80 0.79 0.85 0.77
6 0.78 0.78 0.80 0.77 0.78 1.00 0.78 0.78 0.83 0.77 0.77 0.77
7 0.80 0.79 0.78 0.86 0.78 0.78 1.00 0.78 0.79 0.78 0.79 0.78
8 0.89 0.82 0.85 0.80 0.77 0.78 0.78 1.00 0.78 0.78 0.74 0.81
9 0.79 0.74 0.77 0.79 0.80 0.83 0.79 0.78 1.00 0.76 0.78 0.86
10 0.78 0.81 0.77 0.80 0.79 0.77 0.78 0.78 0.76 1.00 0.75 0.74
11 0.78 0.78 0.77 0.80 0.85 0.77 0.79 0.74 0.78 0.75 1.00 0.78
12 0.78 0.72 0.78 0.79 0.77 0.77 0.78 0.81 0.86 0.74 0.78 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013