CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-May-11 08:51:52 UTC
Project Namev8s8
SequenceMSTQLIPGSL SFIACLAISR YCFRLNSNL
Secondary structure

CHHHHCCCCC CCCCCCCCCC CCHHHHHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-May-11 13:14 UTC
Project Namev8s8
Clustering data
Cluster #123456789101112
Cluster density222.9209.0204.6169.3135.7112.1106.495.272.364.043.219.4
Cluster size2842922521921871681551501261085630
Average cluster RMSD1.31.41.21.11.41.51.51.61.71.71.31.5

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 5.12 5.08 4.92 6.32 5.65 5.19 5.57 4.76 5.09 5.49 5.75 5.60
GDT_TS 0.53 0.55 0.57 0.47 0.58 0.56 0.55 0.60 0.55 0.51 0.56 0.59

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.27 1.27 2.47 3.73 1.45 3.62 3.29 2.40 2.44 2.79 3.05
2 1.27 0.00 1.32 2.49 3.30 1.43 3.27 3.54 2.35 2.62 2.30 2.76
3 1.27 1.32 0.00 2.77 3.17 1.68 3.18 2.96 2.05 2.29 3.07 2.80
4 2.47 2.49 2.77 0.00 3.40 2.47 3.38 3.97 2.90 2.71 2.76 3.28
5 3.73 3.30 3.17 3.40 0.00 2.97 1.13 3.07 2.30 2.65 3.40 2.30
6 1.45 1.43 1.68 2.47 2.97 0.00 2.78 3.10 1.73 2.10 2.28 2.58
7 3.62 3.27 3.18 3.38 1.13 2.78 0.00 2.86 2.01 2.42 3.26 2.34
8 3.29 3.54 2.96 3.97 3.07 3.10 2.86 0.00 2.10 2.18 4.31 3.39
9 2.40 2.35 2.05 2.90 2.30 1.73 2.01 2.10 0.00 1.69 3.01 2.51
10 2.44 2.62 2.29 2.71 2.65 2.10 2.42 2.18 1.69 0.00 3.47 2.90
11 2.79 2.30 3.07 2.76 3.40 2.28 3.26 4.31 3.01 3.47 0.00 2.71
12 3.05 2.76 2.80 3.28 2.30 2.58 2.34 3.39 2.51 2.90 2.71 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.89 0.86 0.76 0.69 0.84 0.70 0.72 0.76 0.72 0.68 0.70
2 0.89 1.00 0.89 0.72 0.70 0.85 0.71 0.70 0.80 0.71 0.71 0.71
3 0.86 0.89 1.00 0.72 0.69 0.83 0.68 0.68 0.78 0.75 0.65 0.73
4 0.76 0.72 0.72 1.00 0.66 0.70 0.64 0.64 0.68 0.70 0.65 0.61
5 0.69 0.70 0.69 0.66 1.00 0.72 0.92 0.68 0.74 0.70 0.70 0.78
6 0.84 0.85 0.83 0.70 0.72 1.00 0.77 0.73 0.82 0.73 0.75 0.74
7 0.70 0.71 0.68 0.64 0.92 0.77 1.00 0.72 0.80 0.73 0.78 0.75
8 0.72 0.70 0.68 0.64 0.68 0.73 0.72 1.00 0.79 0.74 0.67 0.71
9 0.76 0.80 0.78 0.68 0.74 0.82 0.80 0.79 1.00 0.82 0.73 0.82
10 0.72 0.71 0.75 0.70 0.70 0.73 0.73 0.74 0.82 1.00 0.65 0.71
11 0.68 0.71 0.65 0.65 0.70 0.75 0.78 0.67 0.73 0.65 1.00 0.72
12 0.70 0.71 0.73 0.61 0.78 0.74 0.75 0.71 0.82 0.71 0.72 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013