CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Sep-18 11:08:18 UTC
Project Name
SequenceRECKTESNTF PGICITKPPC RKACISEKFT DGHCSKILRR CLCTKPC
Secondary structure

CEEEEECCCC CCCCCCHHHH HHHHHHCCCC EEEECCCCCC EEEEEEC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Sep-18 15:33 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density199.5184.1178.7167.1149.8140.3135.7127.7121.7110.494.984.3
Cluster size237219202180182156174161145116119109
Average cluster RMSD1.21.21.11.11.21.11.31.31.21.11.31.3

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.30 2.41 2.66 2.12 2.33 2.07 2.41 2.50 2.12 2.39 2.50 1.97
GDT_TS 0.77 0.74 0.72 0.78 0.73 0.80 0.77 0.71 0.77 0.78 0.73 0.81

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.12 1.42 1.42 1.07 1.55 1.20 1.42 1.54 2.33 1.09 1.93
2 1.12 0.00 1.68 1.37 1.28 1.45 1.25 1.33 1.52 2.61 1.08 2.17
3 1.42 1.68 0.00 2.08 1.39 1.91 1.72 1.74 1.88 2.73 1.40 2.20
4 1.42 1.37 2.08 0.00 1.61 1.07 1.58 1.50 1.34 2.34 1.67 1.79
5 1.07 1.28 1.39 1.61 0.00 1.63 1.42 1.25 1.43 2.18 1.14 1.75
6 1.55 1.45 1.91 1.07 1.63 0.00 1.53 1.50 1.18 2.44 1.80 1.82
7 1.20 1.25 1.72 1.58 1.42 1.53 0.00 1.65 1.62 2.51 1.51 2.18
8 1.42 1.33 1.74 1.50 1.25 1.50 1.65 0.00 1.21 1.96 1.19 1.61
9 1.54 1.52 1.88 1.34 1.43 1.18 1.62 1.21 0.00 2.06 1.64 1.55
10 2.33 2.61 2.73 2.34 2.18 2.44 2.51 1.96 2.06 0.00 2.21 1.19
11 1.09 1.08 1.40 1.67 1.14 1.80 1.51 1.19 1.64 2.21 0.00 1.92
12 1.93 2.17 2.20 1.79 1.75 1.82 2.18 1.61 1.55 1.19 1.92 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.93 0.87 0.91 0.91 0.89 0.93 0.87 0.89 0.81 0.89 0.85
2 0.93 1.00 0.84 0.91 0.88 0.91 0.89 0.89 0.88 0.79 0.93 0.85
3 0.87 0.84 1.00 0.80 0.87 0.83 0.83 0.89 0.84 0.75 0.89 0.82
4 0.91 0.91 0.80 1.00 0.84 0.93 0.90 0.85 0.89 0.84 0.87 0.90
5 0.91 0.88 0.87 0.84 1.00 0.85 0.86 0.89 0.88 0.83 0.91 0.85
6 0.89 0.91 0.83 0.93 0.85 1.00 0.88 0.84 0.89 0.83 0.84 0.90
7 0.93 0.89 0.83 0.90 0.86 0.88 1.00 0.85 0.88 0.82 0.90 0.84
8 0.87 0.89 0.89 0.85 0.89 0.84 0.85 1.00 0.90 0.82 0.93 0.86
9 0.89 0.88 0.84 0.89 0.88 0.89 0.88 0.90 1.00 0.87 0.89 0.90
10 0.81 0.79 0.75 0.84 0.83 0.83 0.82 0.82 0.87 1.00 0.82 0.89
11 0.89 0.93 0.89 0.87 0.91 0.84 0.90 0.93 0.89 0.82 1.00 0.87
12 0.85 0.85 0.82 0.90 0.85 0.90 0.84 0.86 0.90 0.89 0.87 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013