CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-04 21:52:17 UTC
Project Nameiso2
SequenceMQVQCQQSPV LAGSATLVAL GALALYVAKP SGYGKHTESL KPAATRLPAR AAWFLQELPS FAVPAGILAR QPLSLFGPPG TVLLGLFCVH YFHRTFVYSL LNRGRPYPAI LILRGTAFCT GNGVLQGYYL IYCAEYPDGW YTDIRFSLGV FLFILGMGIN IHSDYILRQL RKPGEISYRI PQGGLFTYVS GANFLGEIIE WIGYALATWS LPALAFAFFS LCFLGLRAFH HHRFYLKMFE DYPKSRKALI PFIF
Secondary structure

CHHHHHHHHH HHHHHHHHHH HHHHHHHCCC CCCCCCCCCC CCCCCCCCCC CCCCCCHHHH HHHHHHHHHC CCCCCCHHHH HHHHHCCCHH HHHHHHHHHH HHHCCCCCCH HHHHHHHHHC CCHHHHHHHH HHCCHHHHHH HHHHHHHCCC CCCHHHHHHH HHHHHHHHHC CCCCCCCCCC CCCCCCCCCC CCCCHHHHHH HHHHHHHHCC CHHHHHHHHH HHHHHHHHHH HHHHHHCCCC CCCCCCCCCC CCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-05 02:44 UTC
Project Nameiso2
Clustering data
Cluster #123456789101112
Cluster density194.4174.0139.3132.7112.6110.0109.0108.490.375.263.663.3
Cluster size3042571961961551691581601131228783
Average cluster RMSD1.61.51.41.51.41.51.41.51.31.61.41.3

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 4.49 4.68 4.76 4.83 4.49 5.13 4.76 4.52 4.74 5.47 4.65 4.46
GDT_TS 0.51 0.46 0.48 0.49 0.47 0.44 0.48 0.48 0.47 0.49 0.50 0.50

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 3.12 3.91 3.78 4.45 4.36 4.50 2.80 3.42 5.83 3.70 4.09
2 3.12 0.00 3.88 4.24 4.84 4.49 4.75 3.50 3.91 6.19 3.82 4.48
3 3.91 3.88 0.00 2.62 3.51 2.99 3.12 2.89 2.50 4.79 3.22 3.38
4 3.78 4.24 2.62 0.00 3.57 3.64 3.46 2.76 2.66 5.10 2.99 3.90
5 4.45 4.84 3.51 3.57 0.00 3.19 2.41 3.61 3.64 3.44 4.14 2.85
6 4.36 4.49 2.99 3.64 3.19 0.00 2.91 3.44 3.62 4.81 4.30 3.02
7 4.50 4.75 3.12 3.46 2.41 2.91 0.00 3.57 3.46 4.10 3.99 2.70
8 2.80 3.50 2.89 2.76 3.61 3.44 3.57 0.00 2.22 4.96 3.02 3.36
9 3.42 3.91 2.50 2.66 3.64 3.62 3.46 2.22 0.00 4.64 2.86 3.72
10 5.83 6.19 4.79 5.10 3.44 4.81 4.10 4.96 4.64 0.00 5.38 4.64
11 3.70 3.82 3.22 2.99 4.14 4.30 3.99 3.02 2.86 5.38 0.00 4.47
12 4.09 4.48 3.38 3.90 2.85 3.02 2.70 3.36 3.72 4.64 4.47 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.64 0.54 0.56 0.50 0.52 0.49 0.65 0.61 0.47 0.62 0.54
2 0.64 1.00 0.55 0.55 0.48 0.50 0.49 0.61 0.59 0.42 0.57 0.51
3 0.54 0.55 1.00 0.66 0.59 0.67 0.62 0.62 0.67 0.49 0.63 0.58
4 0.56 0.55 0.66 1.00 0.56 0.58 0.57 0.65 0.68 0.45 0.72 0.54
5 0.50 0.48 0.59 0.56 1.00 0.60 0.72 0.57 0.55 0.58 0.56 0.68
6 0.52 0.50 0.67 0.58 0.60 1.00 0.65 0.58 0.55 0.49 0.57 0.64
7 0.49 0.49 0.62 0.57 0.72 0.65 1.00 0.59 0.56 0.56 0.55 0.69
8 0.65 0.61 0.62 0.65 0.57 0.58 0.59 1.00 0.70 0.53 0.68 0.58
9 0.61 0.59 0.67 0.68 0.55 0.55 0.56 0.70 1.00 0.51 0.70 0.54
10 0.47 0.42 0.49 0.45 0.58 0.49 0.56 0.53 0.51 1.00 0.47 0.53
11 0.62 0.57 0.63 0.72 0.56 0.57 0.55 0.68 0.70 0.47 1.00 0.53
12 0.54 0.51 0.58 0.54 0.68 0.64 0.69 0.58 0.54 0.53 0.53 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013