CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-06 10:22:21 UTC
Project Name7
SequenceGRFKRFRKKF KKLFKKLSPV IPLLHLG
Secondary structure

CHHHHHHHHH HHHHHHHCCC CHHHHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-06 14:44 UTC
Project Name7
Clustering data
Cluster #123456789101112
Cluster density217.3205.9197.2195.7191.5186.8131.4109.5103.9101.893.486.5
Cluster size240234241160208215143107135104109104
Average cluster RMSD1.11.11.20.81.11.21.11.01.31.01.21.2

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 5.07 5.06 4.51 3.80 5.47 4.61 3.81 3.99 3.70 4.18 3.89 3.95
GDT_TS 0.69 0.70 0.68 0.71 0.69 0.69 0.71 0.70 0.73 0.71 0.72 0.72

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.36 1.47 4.20 0.93 1.40 4.35 1.93 3.99 4.17 2.32 2.90
2 1.36 0.00 2.07 4.46 1.38 1.32 4.69 1.97 4.38 4.64 2.55 3.36
3 1.47 2.07 0.00 3.35 1.95 1.41 3.43 1.17 2.82 3.25 1.61 1.86
4 4.20 4.46 3.35 0.00 4.60 3.74 0.81 2.96 2.52 3.49 2.78 2.59
5 0.93 1.38 1.95 4.60 0.00 1.78 4.78 2.40 4.52 4.60 2.84 3.27
6 1.40 1.32 1.41 3.74 1.78 0.00 3.95 1.53 3.53 3.90 1.78 2.73
7 4.35 4.69 3.43 0.81 4.78 3.95 0.00 3.10 2.23 3.25 2.86 2.42
8 1.93 1.97 1.17 2.96 2.40 1.53 3.10 0.00 2.71 3.42 1.50 1.86
9 3.99 4.38 2.82 2.52 4.52 3.53 2.23 2.71 0.00 1.92 2.62 1.71
10 4.17 4.64 3.25 3.49 4.60 3.90 3.25 3.42 1.92 0.00 3.38 2.50
11 2.32 2.55 1.61 2.78 2.84 1.78 2.86 1.50 2.62 3.38 0.00 2.06
12 2.90 3.36 1.86 2.59 3.27 2.73 2.42 1.86 1.71 2.50 2.06 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.89 0.87 0.74 0.94 0.89 0.73 0.82 0.76 0.79 0.79 0.80
2 0.89 1.00 0.84 0.70 0.88 0.87 0.71 0.84 0.77 0.77 0.81 0.82
3 0.87 0.84 1.00 0.74 0.86 0.91 0.74 0.92 0.78 0.80 0.90 0.85
4 0.74 0.70 0.74 1.00 0.72 0.78 0.94 0.76 0.80 0.76 0.79 0.80
5 0.94 0.88 0.86 0.72 1.00 0.84 0.72 0.81 0.72 0.78 0.77 0.80
6 0.89 0.87 0.91 0.78 0.84 1.00 0.75 0.85 0.80 0.80 0.84 0.80
7 0.73 0.71 0.74 0.94 0.72 0.75 1.00 0.76 0.82 0.78 0.79 0.81
8 0.82 0.84 0.92 0.76 0.81 0.85 0.76 1.00 0.82 0.78 0.90 0.86
9 0.76 0.77 0.78 0.80 0.72 0.80 0.82 0.82 1.00 0.86 0.81 0.86
10 0.79 0.77 0.80 0.76 0.78 0.80 0.78 0.78 0.86 1.00 0.77 0.82
11 0.79 0.81 0.90 0.79 0.77 0.84 0.79 0.90 0.81 0.77 1.00 0.85
12 0.80 0.82 0.85 0.80 0.80 0.80 0.81 0.86 0.86 0.82 0.85 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013