CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-19 00:52:35 UTC
Project NameTetherin4a
SequenceLLLGIGILVL LIIVILGVPL MIF
Secondary structure

CHHHHHHHHH HHHHHHCCCC CCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-19 05:14 UTC
Project NameTetherin4a
Clustering data
Cluster #123456789101112
Cluster density215.6173.7112.8106.297.092.871.763.255.347.544.642.9
Cluster size3203221841911301571311461299792101
Average cluster RMSD1.51.91.61.81.31.71.82.32.32.02.12.4

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 5.39 5.88 5.65 6.43 1.65 5.32 5.61 4.89 5.09 3.94 3.53 4.24
GDT_TS 0.74 0.73 0.66 0.72 0.84 0.72 0.69 0.76 0.71 0.77 0.79 0.76

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 3.76 4.26 4.44 4.37 1.21 4.22 3.48 3.27 2.56 2.79 2.77
2 3.76 0.00 2.24 1.85 5.54 3.94 1.40 1.77 2.23 4.59 5.01 4.85
3 4.26 2.24 0.00 1.60 5.18 4.30 1.91 2.71 3.07 3.96 4.18 3.89
4 4.44 1.85 1.60 0.00 5.90 4.52 1.77 2.85 3.24 4.53 5.02 4.74
5 4.37 5.54 5.18 5.90 0.00 4.31 5.30 4.76 4.53 3.20 2.76 3.42
6 1.21 3.94 4.30 4.52 4.31 0.00 4.34 3.62 3.45 2.43 2.74 2.77
7 4.22 1.40 1.91 1.77 5.30 4.34 0.00 2.12 2.42 4.47 4.95 4.59
8 3.48 1.77 2.71 2.85 4.76 3.62 2.12 0.00 2.38 4.18 4.49 4.47
9 3.27 2.23 3.07 3.24 4.53 3.45 2.42 2.38 0.00 4.48 4.19 4.19
10 2.56 4.59 3.96 4.53 3.20 2.43 4.47 4.18 4.48 0.00 1.85 1.96
11 2.79 5.01 4.18 5.02 2.76 2.74 4.95 4.49 4.19 1.85 0.00 1.57
12 2.77 4.85 3.89 4.74 3.42 2.77 4.59 4.47 4.19 1.96 1.57 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.78 0.76 0.76 0.81 0.96 0.75 0.80 0.80 0.87 0.88 0.88
2 0.78 1.00 0.79 0.91 0.77 0.79 0.90 0.89 0.86 0.75 0.76 0.77
3 0.76 0.79 1.00 0.89 0.74 0.75 0.85 0.78 0.77 0.75 0.73 0.77
4 0.76 0.91 0.89 1.00 0.77 0.78 0.89 0.81 0.80 0.77 0.76 0.77
5 0.81 0.77 0.74 0.77 1.00 0.83 0.76 0.78 0.79 0.85 0.88 0.83
6 0.96 0.79 0.75 0.78 0.83 1.00 0.76 0.79 0.77 0.87 0.86 0.87
7 0.75 0.90 0.85 0.89 0.76 0.76 1.00 0.86 0.86 0.77 0.75 0.76
8 0.80 0.89 0.78 0.81 0.78 0.79 0.86 1.00 0.81 0.77 0.80 0.77
9 0.80 0.86 0.77 0.80 0.79 0.77 0.86 0.81 1.00 0.75 0.78 0.78
10 0.87 0.75 0.75 0.77 0.85 0.87 0.77 0.77 0.75 1.00 0.89 0.90
11 0.88 0.76 0.73 0.76 0.88 0.86 0.75 0.80 0.78 0.89 1.00 0.90
12 0.88 0.77 0.77 0.77 0.83 0.87 0.76 0.77 0.78 0.90 0.90 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013