CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Nov-24 11:53:22 UTC
Project Name
SequenceMEAAAKGIIN TLQKYYCRVR GGRCAVLSCL PKEEQIGKCS TRGRKCCRRK KEAAAKEAAA KEAAAKAKFV AAWTLKAAAH EYGAEALERA GSEQHTPARQ RTQRADTQPS RCRLPSRRTP TTSSDRTINR VRRPTEWIFN PYRLPALFEL YPEFLLVFKE AFRVRRLHLF ALSTLYFYKF FLPTILSLSF FILLVLLLLL FIIVFILHEY GAEALERAGP GINGKAIHLV NNESSEGPGP GFNNFTVSFW LRVPKVSASH LEQYGPGPGY VSIDKFRIFC KALNPKEIEK LYTSYLSGPG PGILRVGYNA PGIPLYKKME AVKLRDLKGP GPGAKFVAAW TLKAAAGPGP GHHHHHH
Secondary structure

CCCCCCCCCC CHHHHHCCCC CCEECCCCCC CCCCEEEECC CCCCEEECCC CCHHHHHHHC CCCCCCCHHH HHHHCCCCCC CCCCCHHHHC CCCCCCCCCC CCCCCCCCCC EECCCCCCCC CCCCCCCEEC CCCCCCCCCC CCCCCCCCCC HHHHHHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCCCCCH HHHHHHHHHH HHHHHHHCCC CCHHHHHHCC CCCCCCCCCC CCCCCCCCCC CCCCCEEEEE ECCCCCCHHH HHHCCCCCCC CCEEEEEEEC CCCCHHHHHH HHHHHHCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Nov-24 15:59 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density149.2148.4134.2107.1104.086.184.673.566.465.153.248.5
Cluster size2742822482091961401401241121059377
Average cluster RMSD1.81.91.82.01.91.61.71.71.71.61.71.6

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 5.83 6.34 4.86 5.39 5.94 5.48 5.72 4.68 5.11 5.10 4.95 5.31
GDT_TS 0.48 0.48 0.51 0.49 0.47 0.49 0.50 0.52 0.50 0.51 0.51 0.48

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 3.27 4.12 3.46 3.78 6.33 4.11 6.15 3.84 6.07 6.33 5.69
2 3.27 0.00 4.61 4.48 3.83 6.72 4.48 6.87 3.87 6.50 6.88 6.58
3 4.12 4.61 0.00 4.51 3.82 4.17 3.39 4.72 3.14 3.86 4.29 3.66
4 3.46 4.48 4.51 0.00 4.26 6.41 4.95 5.43 4.58 5.99 6.21 5.36
5 3.78 3.83 3.82 4.26 0.00 6.05 3.72 5.95 3.62 5.56 5.89 5.35
6 6.33 6.72 4.17 6.41 6.05 0.00 4.87 4.07 4.94 2.69 3.22 3.86
7 4.11 4.48 3.39 4.95 3.72 4.87 0.00 5.18 3.19 4.49 5.10 4.47
8 6.15 6.87 4.72 5.43 5.95 4.07 5.18 0.00 5.16 3.98 3.50 4.09
9 3.84 3.87 3.14 4.58 3.62 4.94 3.19 5.16 0.00 4.65 5.29 5.00
10 6.07 6.50 3.86 5.99 5.56 2.69 4.49 3.98 4.65 0.00 3.21 3.32
11 6.33 6.88 4.29 6.21 5.89 3.22 5.10 3.50 5.29 3.21 0.00 3.91
12 5.69 6.58 3.66 5.36 5.35 3.86 4.47 4.09 5.00 3.32 3.91 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.62 0.57 0.65 0.60 0.52 0.58 0.50 0.56 0.55 0.50 0.54
2 0.62 1.00 0.54 0.62 0.61 0.47 0.58 0.45 0.57 0.52 0.45 0.52
3 0.57 0.54 1.00 0.56 0.56 0.56 0.62 0.54 0.63 0.57 0.54 0.60
4 0.65 0.62 0.56 1.00 0.58 0.50 0.57 0.51 0.55 0.56 0.48 0.54
5 0.60 0.61 0.56 0.58 1.00 0.48 0.59 0.49 0.60 0.52 0.48 0.50
6 0.52 0.47 0.56 0.50 0.48 1.00 0.54 0.62 0.54 0.65 0.64 0.57
7 0.58 0.58 0.62 0.57 0.59 0.54 1.00 0.53 0.70 0.60 0.49 0.57
8 0.50 0.45 0.54 0.51 0.49 0.62 0.53 1.00 0.53 0.58 0.66 0.55
9 0.56 0.57 0.63 0.55 0.60 0.54 0.70 0.53 1.00 0.58 0.51 0.55
10 0.55 0.52 0.57 0.56 0.52 0.65 0.60 0.58 0.58 1.00 0.62 0.60
11 0.50 0.45 0.54 0.48 0.48 0.64 0.49 0.66 0.51 0.62 1.00 0.54
12 0.54 0.52 0.60 0.54 0.50 0.57 0.57 0.55 0.55 0.60 0.54 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013