CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-18 01:26:20 UTC
Project NameJess_T45A
SequenceLLLGIGILVL LIIVILGVPL IIF
Secondary structure

CHHHHHHHHH HHHHHHHHHH CCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-18 05:48 UTC
Project NameJess_T45A
Clustering data
Cluster #123456789101112
Cluster density406.0359.9211.2209.7121.8111.9105.472.059.449.835.334.8
Cluster size361375265222154115100117112845144
Average cluster RMSD0.91.01.31.11.31.00.91.61.91.71.41.3

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 5.35 5.63 1.70 5.89 4.90 1.68 5.15 4.50 3.74 3.94 5.17 5.84
GDT_TS 0.74 0.75 0.81 0.72 0.74 0.81 0.68 0.75 0.75 0.75 0.63 0.63

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 0.97 4.41 1.07 0.84 4.60 3.52 1.84 2.69 2.28 4.64 4.21
2 0.97 0.00 4.67 0.73 1.45 4.88 3.61 2.24 2.97 2.79 4.73 4.22
3 4.41 4.67 0.00 4.85 3.97 0.49 4.41 3.70 2.88 3.19 4.46 5.14
4 1.07 0.73 4.85 0.00 1.55 5.04 3.63 2.42 3.10 2.88 4.62 4.09
5 0.84 1.45 3.97 1.55 0.00 4.16 3.49 1.61 2.36 1.89 4.48 4.27
6 4.60 4.88 0.49 5.04 4.16 0.00 4.48 3.86 2.96 3.30 4.42 5.18
7 3.52 3.61 4.41 3.63 3.49 4.48 0.00 3.75 4.01 3.81 3.10 2.82
8 1.84 2.24 3.70 2.42 1.61 3.86 3.75 0.00 1.57 1.61 4.55 4.54
9 2.69 2.97 2.88 3.10 2.36 2.96 4.01 1.57 0.00 1.82 4.56 4.80
10 2.28 2.79 3.19 2.88 1.89 3.30 3.81 1.61 1.82 0.00 4.14 4.50
11 4.64 4.73 4.46 4.62 4.48 4.42 3.10 4.55 4.56 4.14 0.00 2.31
12 4.21 4.22 5.14 4.09 4.27 5.18 2.82 4.54 4.80 4.50 2.31 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.94 0.84 0.91 0.96 0.84 0.81 0.89 0.87 0.92 0.68 0.69
2 0.94 1.00 0.83 0.97 0.93 0.83 0.81 0.88 0.87 0.91 0.68 0.73
3 0.84 0.83 1.00 0.81 0.85 1.00 0.80 0.84 0.86 0.86 0.72 0.69
4 0.91 0.97 0.81 1.00 0.90 0.80 0.75 0.87 0.87 0.88 0.66 0.67
5 0.96 0.93 0.85 0.90 1.00 0.85 0.81 0.91 0.89 0.94 0.69 0.68
6 0.84 0.83 1.00 0.80 0.85 1.00 0.81 0.85 0.86 0.86 0.71 0.69
7 0.81 0.81 0.80 0.75 0.81 0.81 1.00 0.79 0.77 0.79 0.78 0.79
8 0.89 0.88 0.84 0.87 0.91 0.85 0.79 1.00 0.91 0.92 0.68 0.69
9 0.87 0.87 0.86 0.87 0.89 0.86 0.77 0.91 1.00 0.91 0.69 0.68
10 0.92 0.91 0.86 0.88 0.94 0.86 0.79 0.92 0.91 1.00 0.71 0.69
11 0.68 0.68 0.72 0.66 0.69 0.71 0.78 0.68 0.69 0.71 1.00 0.87
12 0.69 0.73 0.69 0.67 0.68 0.69 0.79 0.69 0.68 0.69 0.87 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013