CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-09 10:25:24 UTC
Project Namemc-11-12
SequenceEMEKEFEQID KSGSWAAIYQ DIRHEASDFP CRVAKLPKNK NRNRYRDVSP FDHSRIKLHQ EDNDYINASL IKMEEAQRSY ILTQGPLPNT CGHFWEMVWE QKSRGVVMLN RVMEKGSLKC AQYWPQKEEK EMIFEDTNLK LTLISEDIKS YYTVRQLELE NLTTQETREI LHFHYTTWPD FGVPESPASF LNFLFKVRES GSLSPEHGPV VVHCSAGIGR SGTFCLADTC LLLMDKRKDP SSVDIKKVLL EMRKFRMGLI QTADQLRFSY LAVIEGAKFI MGDSSVQDQW KELSHED
Secondary structure

CHHHHHHHHH HCCCHHHHHH HHHHHCCCCC CCCCCCCCCC CCCCCCCCCC CCCCEEECCC CCCCEEEEEE EEECCCCEEE EEECCCCCCC HHHHHHHHHH CCCCEEEECC CCEECCEECC CCCCCCCCCC CEEECCCCEE EEEEEEEECC CEEEEEEEEE ECCCCEEEEE EEEEECCCCC CCCCCCHHHH HHHHHHHHHC CCCCCCCCCE EEECCCCCCH HHHHHHHHHH HHHHHHHCCC CCCCHHHHHH HHCCCCCCCC CCHHHHHHHH HHHHHHHHHH CCCCCHHHHH HHHHCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-09 15:23 UTC
Project Namemc-11-12
Clustering data
Cluster #123456789101112
Cluster density220.7176.5156.3149.6139.5137.2117.6114.5105.297.866.558.4
Cluster size3022282021971681911501501361277475
Average cluster RMSD1.41.31.31.31.21.41.31.31.31.31.11.3

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.49 2.64 2.60 2.59 2.48 2.71 2.71 2.51 2.77 2.64 2.45 2.44
GDT_TS 0.66 0.68 0.66 0.65 0.69 0.67 0.68 0.69 0.68 0.66 0.69 0.69

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 2.42 2.39 2.44 2.33 2.31 2.08 2.45 2.34 2.37 2.42 2.30
2 2.42 0.00 2.44 2.86 2.46 1.89 2.31 2.85 2.23 2.22 2.56 2.77
3 2.39 2.44 0.00 2.36 1.85 2.35 2.64 2.12 2.69 2.19 2.18 2.67
4 2.44 2.86 2.36 0.00 2.00 2.85 2.77 1.88 3.28 2.74 2.54 2.61
5 2.33 2.46 1.85 2.00 0.00 2.31 2.48 2.00 2.72 2.23 2.05 2.70
6 2.31 1.89 2.35 2.85 2.31 0.00 2.13 2.75 2.26 2.11 2.39 2.70
7 2.08 2.31 2.64 2.77 2.48 2.13 0.00 2.57 2.33 2.36 2.51 2.72
8 2.45 2.85 2.12 1.88 2.00 2.75 2.57 0.00 3.28 2.57 2.11 2.55
9 2.34 2.23 2.69 3.28 2.72 2.26 2.33 3.28 0.00 2.45 2.79 2.95
10 2.37 2.22 2.19 2.74 2.23 2.11 2.36 2.57 2.45 0.00 2.05 2.98
11 2.42 2.56 2.18 2.54 2.05 2.39 2.51 2.11 2.79 2.05 0.00 2.73
12 2.30 2.77 2.67 2.61 2.70 2.70 2.72 2.55 2.95 2.98 2.73 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.70 0.68 0.68 0.72 0.72 0.73 0.68 0.77 0.69 0.72 0.72
2 0.70 1.00 0.69 0.64 0.70 0.79 0.73 0.66 0.72 0.72 0.70 0.69
3 0.68 0.69 1.00 0.71 0.79 0.70 0.65 0.76 0.68 0.73 0.76 0.66
4 0.68 0.64 0.71 1.00 0.78 0.67 0.65 0.79 0.64 0.68 0.71 0.68
5 0.72 0.70 0.79 0.78 1.00 0.73 0.69 0.76 0.72 0.73 0.77 0.69
6 0.72 0.79 0.70 0.67 0.73 1.00 0.75 0.69 0.73 0.75 0.73 0.69
7 0.73 0.73 0.65 0.65 0.69 0.75 1.00 0.69 0.73 0.70 0.72 0.66
8 0.68 0.66 0.76 0.79 0.76 0.69 0.69 1.00 0.65 0.69 0.73 0.69
9 0.77 0.72 0.68 0.64 0.72 0.73 0.73 0.65 1.00 0.71 0.73 0.68
10 0.69 0.72 0.73 0.68 0.73 0.75 0.70 0.69 0.71 1.00 0.77 0.65
11 0.72 0.70 0.76 0.71 0.77 0.73 0.72 0.73 0.73 0.77 1.00 0.67
12 0.72 0.69 0.66 0.68 0.69 0.69 0.66 0.69 0.68 0.65 0.67 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013