CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Dec-10 07:47:02 UTC
Project Name
SequenceVSPPPPIADE PLTVNTGIYL IECYSLDDKA ETFKVNAFLS LSWKDRRLAF DPVRSGVRVK TYEPEAIWIP EIRFVNVENA RDADVVDISV SPDGTVQYLE RFSARVLSPL DFRRYPFDSQ TLHIYLIVRS VDTRNIVLAV DLEKVGKNDD VFLTGWDIES FTAVVKPANF ALEDRLESKL DYQLRISRQY FSYIPNIILP MLFILFISWT AFWSTSYEAN VTLVVSTLIA HIAFNILVET NLPKTPYMTY TGAIIFMIYL FYFVAVIEVT VQHYLKVESQ PARAASITRA SRIAFPVVFL LANIILAFLF F
Secondary structure

CCCCCCCCCC CEEEEEEEEE EEEEEEECCC CEEEEEEEEE EEEECCCCCC CHHHHCCCCE ECCCCCCCCC CCEECCCCCC CEEEEEEEEE CCCCEEEEEE EEEEEEECCC CCCCCCCCEE EEEEEEEEEC CCCCCEEEEE CCCCCEECCC CCCCCEEEEE EEEEEEEEEE ECCCCEEEEE EEEEEEEECC CCHHHHCHHH HHHHHHHHHC CCCCCCHHHH HHHHHHHHHH HHHHHHHHHH HCCCCCCCCH HHHHHHHHHH HHHHHHHHHH HHHHHHHCCC HHHHHHHHHH HHHHHHHHHH HHHHHHHHHH C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Dec-10 11:47 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density266.6198.1146.5136.5123.3114.5109.3106.492.469.666.065.7
Cluster size364274197183171158137139118769093
Average cluster RMSD1.41.41.31.31.41.41.31.31.31.11.41.4

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 4.29 3.83 3.88 3.96 3.87 3.63 4.28 4.07 3.99 3.44 3.48 3.58
GDT_TS 0.48 0.51 0.53 0.52 0.55 0.57 0.48 0.51 0.52 0.57 0.57 0.57

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 2.41 2.52 2.32 3.52 3.75 2.55 2.27 2.64 3.23 4.30 3.71
2 2.41 0.00 2.29 2.31 3.19 3.61 2.13 2.33 2.25 3.00 3.82 3.38
3 2.52 2.29 0.00 2.72 3.42 3.41 2.89 2.28 2.64 2.60 3.70 3.17
4 2.32 2.31 2.72 0.00 3.32 3.78 2.25 2.24 2.27 3.26 4.18 3.86
5 3.52 3.19 3.42 3.32 0.00 2.61 3.59 3.51 3.81 3.04 3.47 3.06
6 3.75 3.61 3.41 3.78 2.61 0.00 3.70 3.81 4.19 3.08 2.73 2.21
7 2.55 2.13 2.89 2.25 3.59 3.70 0.00 2.66 2.68 3.58 4.16 3.70
8 2.27 2.33 2.28 2.24 3.51 3.81 2.66 0.00 2.53 2.81 4.14 3.72
9 2.64 2.25 2.64 2.27 3.81 4.19 2.68 2.53 0.00 3.29 4.26 3.87
10 3.23 3.00 2.60 3.26 3.04 3.08 3.58 2.81 3.29 0.00 3.30 2.93
11 4.30 3.82 3.70 4.18 3.47 2.73 4.16 4.14 4.26 3.30 0.00 2.57
12 3.71 3.38 3.17 3.86 3.06 2.21 3.70 3.72 3.87 2.93 2.57 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.70 0.73 0.71 0.59 0.59 0.68 0.74 0.68 0.63 0.54 0.58
2 0.70 1.00 0.71 0.72 0.62 0.59 0.75 0.71 0.71 0.63 0.57 0.60
3 0.73 0.71 1.00 0.70 0.62 0.60 0.65 0.77 0.71 0.68 0.57 0.61
4 0.71 0.72 0.70 1.00 0.61 0.59 0.74 0.77 0.71 0.62 0.58 0.59
5 0.59 0.62 0.62 0.61 1.00 0.74 0.61 0.62 0.58 0.69 0.67 0.72
6 0.59 0.59 0.60 0.59 0.74 1.00 0.57 0.59 0.56 0.70 0.72 0.78
7 0.68 0.75 0.65 0.74 0.61 0.57 1.00 0.67 0.68 0.59 0.55 0.58
8 0.74 0.71 0.77 0.77 0.62 0.59 0.67 1.00 0.70 0.66 0.54 0.62
9 0.68 0.71 0.71 0.71 0.58 0.56 0.68 0.70 1.00 0.61 0.55 0.56
10 0.63 0.63 0.68 0.62 0.69 0.70 0.59 0.66 0.61 1.00 0.64 0.71
11 0.54 0.57 0.57 0.58 0.67 0.72 0.55 0.54 0.55 0.64 1.00 0.70
12 0.58 0.60 0.61 0.59 0.72 0.78 0.58 0.62 0.56 0.71 0.70 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013