CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Oct-09 06:14:35 UTC
Project Name
SequenceVLSPADKTNV KAAWGKVGAH AGEYGAEALE RMFLSFPTTK TYFPHFDLSH GSAQVKGHGK KVADALTNAV AHVDDMPNAL SALSDLHAHK LRVDPVNFKL LSHCLLVTLA AHLPAEFTPA VHASLDKFLA SVSTVLTSKY R
Secondary structure

CCCHHHHHHH HHHHHHHCCC HHHHHHHHHH HHHHHCCCCC CCCCCCCCCC CCHHHHHHHH HHHHHHHHHH HCCCCHHHHH HHHHHHHHCC CCCCCHHHHH HHHHHHHHHH HHCCCCCCHH HHHHHHHHHH HHHHHHCCCC C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Oct-09 10:52 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density290.0199.7167.8155.6133.4129.6113.194.288.484.481.670.4
Cluster size38023522515917614814012612910410276
Average cluster RMSD1.31.21.31.01.31.11.21.31.51.21.21.1

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.72 2.77 2.42 3.06 2.71 2.51 2.50 2.33 2.13 2.47 2.79 2.66
GDT_TS 0.73 0.70 0.76 0.69 0.75 0.72 0.75 0.78 0.76 0.75 0.74 0.74

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.85 2.48 2.26 2.65 1.94 2.74 2.87 2.41 2.10 2.88 1.64
2 1.85 0.00 2.60 2.34 2.67 1.76 2.45 2.76 2.05 2.30 3.00 2.06
3 2.48 2.60 0.00 2.05 1.85 2.20 2.32 1.88 1.68 1.72 1.74 2.04
4 2.26 2.34 2.05 0.00 2.05 1.89 2.27 2.56 2.25 2.24 2.28 1.98
5 2.65 2.67 1.85 2.05 0.00 2.36 1.96 2.47 2.03 2.11 1.73 2.04
6 1.94 1.76 2.20 1.89 2.36 0.00 2.12 2.45 1.99 1.83 2.67 1.98
7 2.74 2.45 2.32 2.27 1.96 2.12 0.00 2.67 2.11 2.50 2.43 2.32
8 2.87 2.76 1.88 2.56 2.47 2.45 2.67 0.00 1.98 2.18 2.13 2.56
9 2.41 2.05 1.68 2.25 2.03 1.99 2.11 1.98 0.00 2.03 2.16 2.08
10 2.10 2.30 1.72 2.24 2.11 1.83 2.50 2.18 2.03 0.00 2.25 1.94
11 2.88 3.00 1.74 2.28 1.73 2.67 2.43 2.13 2.16 2.25 0.00 2.29
12 1.64 2.06 2.04 1.98 2.04 1.98 2.32 2.56 2.08 1.94 2.29 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.76 0.75 0.78 0.76 0.80 0.75 0.72 0.70 0.77 0.73 0.85
2 0.76 1.00 0.72 0.79 0.70 0.83 0.78 0.75 0.79 0.73 0.68 0.74
3 0.75 0.72 1.00 0.76 0.83 0.77 0.74 0.83 0.82 0.82 0.84 0.79
4 0.78 0.79 0.76 1.00 0.75 0.87 0.78 0.75 0.76 0.76 0.72 0.77
5 0.76 0.70 0.83 0.75 1.00 0.77 0.76 0.77 0.78 0.81 0.83 0.79
6 0.80 0.83 0.77 0.87 0.77 1.00 0.79 0.74 0.76 0.78 0.72 0.79
7 0.75 0.78 0.74 0.78 0.76 0.79 1.00 0.73 0.76 0.72 0.70 0.73
8 0.72 0.75 0.83 0.75 0.77 0.74 0.73 1.00 0.81 0.75 0.78 0.76
9 0.70 0.79 0.82 0.76 0.78 0.76 0.76 0.81 1.00 0.77 0.77 0.76
10 0.77 0.73 0.82 0.76 0.81 0.78 0.72 0.75 0.77 1.00 0.76 0.79
11 0.73 0.68 0.84 0.72 0.83 0.72 0.70 0.78 0.77 0.76 1.00 0.76
12 0.85 0.74 0.79 0.77 0.79 0.79 0.73 0.76 0.76 0.79 0.76 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013