CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-03 06:58:28 UTC
Project Namep12
SequenceMALDGSSGGG SNVETLLIVA IIVVIMAIML YYFWWMPRQQ KKCSKAEECT CNNGSASLKT S
Secondary structure

CCCCCCCCCC CCCCCHHHHH HHHHHHHHHH HHHHHCCHHH HHHHHHCCCC CCCCCCCCCC C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-03 11:25 UTC
Project Namep12
Clustering data
Cluster #123456789101112
Cluster density137.5129.5126.1114.383.877.375.764.763.248.540.516.3
Cluster size291239263233170181166118129928533
Average cluster RMSD2.11.82.12.02.02.32.21.82.01.92.12.0

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 7.47 8.26 7.70 7.83 7.61 7.56 7.73 7.68 8.00 7.21 6.83 7.41
GDT_TS 0.44 0.42 0.43 0.42 0.43 0.46 0.44 0.45 0.45 0.45 0.47 0.45

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 3.22 2.23 2.12 2.92 2.66 2.16 2.40 3.36 3.86 3.94 4.39
2 3.22 0.00 2.28 2.99 3.74 4.05 2.84 4.08 2.49 5.01 5.33 4.82
3 2.23 2.28 0.00 2.72 2.93 3.22 2.46 3.04 2.38 4.31 4.45 4.15
4 2.12 2.99 2.72 0.00 3.47 3.30 2.08 3.43 3.33 4.38 4.80 4.12
5 2.92 3.74 2.93 3.47 0.00 2.57 2.79 3.40 3.87 2.95 3.35 4.48
6 2.66 4.05 3.22 3.30 2.57 0.00 3.33 2.86 4.29 3.28 3.10 4.19
7 2.16 2.84 2.46 2.08 2.79 3.33 0.00 3.31 2.94 4.03 4.64 4.46
8 2.40 4.08 3.04 3.43 3.40 2.86 3.31 0.00 4.35 4.37 4.18 4.88
9 3.36 2.49 2.38 3.33 3.87 4.29 2.94 4.35 0.00 4.83 5.39 4.74
10 3.86 5.01 4.31 4.38 2.95 3.28 4.03 4.37 4.83 0.00 2.69 4.65
11 3.94 5.33 4.45 4.80 3.35 3.10 4.64 4.18 5.39 2.69 0.00 4.95
12 4.39 4.82 4.15 4.12 4.48 4.19 4.46 4.88 4.74 4.65 4.95 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.69 0.79 0.79 0.74 0.72 0.80 0.74 0.69 0.67 0.62 0.57
2 0.69 1.00 0.78 0.69 0.63 0.59 0.68 0.64 0.73 0.61 0.57 0.56
3 0.79 0.78 1.00 0.76 0.75 0.68 0.77 0.69 0.77 0.66 0.62 0.62
4 0.79 0.69 0.76 1.00 0.70 0.68 0.82 0.71 0.72 0.69 0.61 0.60
5 0.74 0.63 0.75 0.70 1.00 0.77 0.74 0.62 0.66 0.70 0.65 0.60
6 0.72 0.59 0.68 0.68 0.77 1.00 0.69 0.68 0.64 0.67 0.69 0.63
7 0.80 0.68 0.77 0.82 0.74 0.69 1.00 0.70 0.74 0.70 0.60 0.57
8 0.74 0.64 0.69 0.71 0.62 0.68 0.70 1.00 0.63 0.56 0.56 0.54
9 0.69 0.73 0.77 0.72 0.66 0.64 0.74 0.63 1.00 0.66 0.62 0.59
10 0.67 0.61 0.66 0.69 0.70 0.67 0.70 0.56 0.66 1.00 0.74 0.59
11 0.62 0.57 0.62 0.61 0.65 0.69 0.60 0.56 0.62 0.74 1.00 0.63
12 0.57 0.56 0.62 0.60 0.60 0.63 0.57 0.54 0.59 0.59 0.63 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013