CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-May-02 04:41:24 UTC
Project Name1zah
SequencePHSHPALTPE QKKELSDIAH RIVAPGKGIL AADESTGSIA KRLQSIGTEN TEENRRFYRQ LLLTADDRVN PCIGGVILFH ETLYQKADDG RPFPQVIKSK GGVVGIKVDK GVVPLAGTNG ETTTQGLDGL SERCAQYKKD GADFAKWRCV LKIGEHTPSA LAIMENANVL ARYASICQQN GIVPIVEPEI LPDGDHDLKR CQYVTEKVLA AVYKALSDHH IYLEGTLLKP NMVTPGHACT QKYSHEEIAM ATVTALRRTV PPAVTGVTFL SGGQSEEEAS INLNAINKCP LLKPWALTFS YGRALQASAL KAWGGKKENL KAAQEEYVKR ALANSLACQG KYTPSGQAGA AASESLFISN HAY
Secondary structure

CCCCCCCCHH HHHHHHHHHH HHCCCCCEEE EECCCHHHHH HHHHCCCCCC CHHHHHHHHH HHHCCCCCCC CCEEEEEECH HHHCCCCCCC CCHHHHHHHC CCEEEEECCC CEEECCCCCC CEEECCCCCH HHHHHHHHHC CCCEEEEEEE ECCCCCCCCH HHHHHHHHHH HHHHHHHHHC CCEEEEEEEE CCCCCCCHHH HHHHHHHHHH HHHHHHHHCC CCCCCCEECC CCCCCCCCCC CCCCHHHHHH HHHHHHHCCC CCCCCEEEEC CCCCCHHHHH HHHHHHHHCC CCCCCEEEEE ECHHHHHHHH HHHCCCCCCH HHHHHHHHHH HHHHHHHCCC CCCCCCCCCC CCCCCCCCCC CCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-May-02 09:48 UTC
Project Name1zah
Clustering data
Cluster #123456789101112
Cluster density140.6133.0115.6114.396.587.585.881.173.171.666.343.4
Cluster size24323721320618416516315112912511668
Average cluster RMSD1.71.81.81.81.91.91.91.91.81.71.71.6

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.95 3.10 2.99 3.11 3.12 3.34 3.59 3.27 3.25 3.75 3.07 3.54
GDT_TS 0.69 0.67 0.68 0.67 0.66 0.63 0.66 0.67 0.67 0.63 0.66 0.65

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 2.43 2.30 2.59 2.17 2.49 3.04 2.76 2.65 3.09 2.57 3.07
2 2.43 0.00 2.42 2.24 2.46 2.52 2.63 2.37 2.53 2.65 2.07 2.99
3 2.30 2.42 0.00 2.47 2.40 2.76 2.82 2.74 2.65 3.01 2.39 3.36
4 2.59 2.24 2.47 0.00 2.73 2.54 2.54 2.35 2.72 3.06 2.20 3.10
5 2.17 2.46 2.40 2.73 0.00 2.38 2.91 2.87 2.36 2.93 2.45 3.46
6 2.49 2.52 2.76 2.54 2.38 0.00 2.80 2.69 2.77 2.98 2.62 3.16
7 3.04 2.63 2.82 2.54 2.91 2.80 0.00 2.17 2.76 2.61 2.50 3.31
8 2.76 2.37 2.74 2.35 2.87 2.69 2.17 0.00 2.82 2.70 2.47 2.77
9 2.65 2.53 2.65 2.72 2.36 2.77 2.76 2.82 0.00 2.46 2.35 3.15
10 3.09 2.65 3.01 3.06 2.93 2.98 2.61 2.70 2.46 0.00 2.73 3.32
11 2.57 2.07 2.39 2.20 2.45 2.62 2.50 2.47 2.35 2.73 0.00 2.94
12 3.07 2.99 3.36 3.10 3.46 3.16 3.31 2.77 3.15 3.32 2.94 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.70 0.74 0.71 0.74 0.71 0.69 0.71 0.74 0.72 0.71 0.69
2 0.70 1.00 0.74 0.77 0.71 0.70 0.74 0.78 0.73 0.72 0.78 0.70
3 0.74 0.74 1.00 0.74 0.72 0.70 0.71 0.74 0.73 0.70 0.74 0.70
4 0.71 0.77 0.74 1.00 0.71 0.73 0.75 0.77 0.75 0.71 0.78 0.72
5 0.74 0.71 0.72 0.71 1.00 0.77 0.73 0.73 0.76 0.73 0.72 0.72
6 0.71 0.70 0.70 0.73 0.77 1.00 0.72 0.73 0.73 0.74 0.72 0.73
7 0.69 0.74 0.71 0.75 0.73 0.72 1.00 0.83 0.73 0.71 0.75 0.74
8 0.71 0.78 0.74 0.77 0.73 0.73 0.83 1.00 0.73 0.74 0.74 0.76
9 0.74 0.73 0.73 0.75 0.76 0.73 0.73 0.73 1.00 0.73 0.76 0.71
10 0.72 0.72 0.70 0.71 0.73 0.74 0.71 0.74 0.73 1.00 0.71 0.73
11 0.71 0.78 0.74 0.78 0.72 0.72 0.75 0.74 0.76 0.71 1.00 0.73
12 0.69 0.70 0.70 0.72 0.72 0.73 0.74 0.76 0.71 0.73 0.73 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013