CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-May-30 13:40:09 UTC
Project Name
SequenceEVWVVGMGIV MSLIVLAIVF GNVLVITAIA KFERLQTVTN YFITSLACAD LVMGLAVVPF GAAHILTKTW TFGNFWCEFW TSIDVLCVTA SIETLCVIAV DRYFAITSPF KYQSLLTKNK ARVIILMVWI VSGLTSFLPI QMHWYRATHQ EAINCYAEET CCDFFTNQAY AIASSIVSFY VPLVIMVFVY SRVFQEAKRQ LQKIDKSEGR FHVQNLSQVE QDGRTGHGLR RSSKFCLKEH KALKTLGIIM GTFTLCWLPF FIVNIVHVIQ DNLIRKEVYI LLNWIGYVNS GFNPLIYCRS PDFRIAFQEL LC
Secondary structure

CCHHHHHHHH HHHHHHHHHH HHHHHHHHHH HCCCCCCHHH HHHHHHHHHH HCCCCCHHHH HHHHHHHCCC CCCCHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHCHH HHHHHCCHHH HHHHHHHHHH HHHHCCHHHH HCCCCCCCCH HHHHHHHCCC CCCCCCCHHH HHHHHHHHCH HHHHHHHHHH HHHHHHHHHH HHHHHHHCCC CCCCCCCCCC CCCCCCCCCC CCCCCCHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHHHC CCCCCHHHHH HHHHHHHHHH HHHHHHHCCC HHHHHHHHCC CC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-May-30 18:40 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density130.2118.0108.2106.2105.1103.693.489.885.464.955.640.4
Cluster size2362062251742032071561401791078978
Average cluster RMSD1.81.72.11.61.92.01.71.62.11.61.61.9

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 6.76 5.35 6.12 5.59 4.85 5.64 4.43 5.73 6.50 6.26 5.46 5.18
GDT_TS 0.54 0.58 0.52 0.58 0.59 0.59 0.59 0.56 0.53 0.52 0.60 0.57

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 3.78 2.42 3.48 4.20 2.96 4.17 3.86 2.42 2.47 4.00 3.52
2 3.78 0.00 2.95 2.83 2.28 3.49 3.04 3.10 2.85 3.47 4.01 3.05
3 2.42 2.95 0.00 3.08 3.42 2.82 3.62 3.61 1.96 2.40 3.91 2.88
4 3.48 2.83 3.08 0.00 3.30 2.82 2.59 2.49 3.11 3.28 3.10 3.51
5 4.20 2.28 3.42 3.30 0.00 3.65 2.86 3.24 3.56 4.09 3.84 3.57
6 2.96 3.49 2.82 2.82 3.65 0.00 3.20 3.54 3.29 3.16 3.33 2.70
7 4.17 3.04 3.62 2.59 2.86 3.20 0.00 2.55 4.01 3.94 3.15 3.48
8 3.86 3.10 3.61 2.49 3.24 3.54 2.55 0.00 3.53 3.86 2.68 4.22
9 2.42 2.85 1.96 3.11 3.56 3.29 4.01 3.53 0.00 2.32 4.20 3.30
10 2.47 3.47 2.40 3.28 4.09 3.16 3.94 3.86 2.32 0.00 4.41 2.82
11 4.00 4.01 3.91 3.10 3.84 3.33 3.15 2.68 4.20 4.41 0.00 4.47
12 3.52 3.05 2.88 3.51 3.57 2.70 3.48 4.22 3.30 2.82 4.47 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.72 0.76 0.65 0.71 0.69 0.62 0.59 0.78 0.77 0.56 0.71
2 0.72 1.00 0.71 0.69 0.77 0.72 0.65 0.64 0.76 0.69 0.58 0.82
3 0.76 0.71 1.00 0.62 0.68 0.66 0.57 0.59 0.82 0.78 0.56 0.75
4 0.65 0.69 0.62 1.00 0.66 0.77 0.73 0.71 0.65 0.66 0.67 0.64
5 0.71 0.77 0.68 0.66 1.00 0.71 0.67 0.62 0.71 0.68 0.57 0.74
6 0.69 0.72 0.66 0.77 0.71 1.00 0.69 0.68 0.69 0.69 0.65 0.71
7 0.62 0.65 0.57 0.73 0.67 0.69 1.00 0.78 0.59 0.60 0.70 0.61
8 0.59 0.64 0.59 0.71 0.62 0.68 0.78 1.00 0.58 0.59 0.73 0.59
9 0.78 0.76 0.82 0.65 0.71 0.69 0.59 0.58 1.00 0.79 0.55 0.76
10 0.77 0.69 0.78 0.66 0.68 0.69 0.60 0.59 0.79 1.00 0.54 0.73
11 0.56 0.58 0.56 0.67 0.57 0.65 0.70 0.73 0.55 0.54 1.00 0.56
12 0.71 0.82 0.75 0.64 0.74 0.71 0.61 0.59 0.76 0.73 0.56 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013