CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-16 01:58:13 UTC
Project NameMutation4NK
SequenceSEACRDGLRA VMECRNVTHL LQQELTEAQK GFQDVEAQAA TCNHTVMALM ASLDAEKAQG Q
Secondary structure

CHHHHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHHHH C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-16 06:25 UTC
Project NameMutation4NK
Clustering data
Cluster #123456789101112
Cluster density237.6226.2216.7173.2142.5137.2126.5110.2107.3101.788.176.0
Cluster size2672372871621371591961141511298972
Average cluster RMSD1.11.01.30.91.01.21.51.01.41.31.00.9

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.16 2.61 2.37 4.58 4.01 2.56 2.85 3.91 2.45 2.63 3.45 3.87
GDT_TS 0.79 0.75 0.76 0.65 0.70 0.71 0.67 0.65 0.78 0.72 0.70 0.63

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.83 0.93 3.71 3.06 1.50 1.43 3.02 1.39 1.91 2.38 3.37
2 1.83 0.00 1.53 2.54 1.92 3.03 2.59 1.70 1.52 1.01 1.65 2.04
3 0.93 1.53 0.00 3.15 2.53 1.86 1.46 2.41 0.87 1.43 1.77 2.78
4 3.71 2.54 3.15 0.00 0.90 4.73 4.08 1.48 2.94 2.24 1.84 2.28
5 3.06 1.92 2.53 0.90 0.00 4.12 3.46 1.13 2.37 1.64 1.33 2.00
6 1.50 3.03 1.86 4.73 4.12 0.00 1.04 4.08 2.25 2.97 3.27 4.39
7 1.43 2.59 1.46 4.08 3.46 1.04 0.00 3.44 1.79 2.48 2.59 3.83
8 3.02 1.70 2.41 1.48 1.13 4.08 3.44 0.00 2.25 1.56 1.62 1.18
9 1.39 1.52 0.87 2.94 2.37 2.25 1.79 2.25 0.00 1.40 1.64 2.61
10 1.91 1.01 1.43 2.24 1.64 2.97 2.48 1.56 1.40 0.00 1.39 1.87
11 2.38 1.65 1.77 1.84 1.33 3.27 2.59 1.62 1.64 1.39 0.00 2.42
12 3.37 2.04 2.78 2.28 2.00 4.39 3.83 1.18 2.61 1.87 2.42 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.83 0.94 0.73 0.81 0.87 0.88 0.74 0.89 0.83 0.83 0.70
2 0.83 1.00 0.85 0.75 0.82 0.73 0.72 0.86 0.87 0.92 0.82 0.85
3 0.94 0.85 1.00 0.72 0.80 0.83 0.87 0.77 0.98 0.88 0.89 0.74
4 0.73 0.75 0.72 1.00 0.94 0.67 0.67 0.85 0.75 0.80 0.83 0.77
5 0.81 0.82 0.80 0.94 1.00 0.71 0.73 0.92 0.81 0.88 0.87 0.82
6 0.87 0.73 0.83 0.67 0.71 1.00 0.95 0.66 0.79 0.72 0.77 0.64
7 0.88 0.72 0.87 0.67 0.73 0.95 1.00 0.68 0.84 0.75 0.78 0.62
8 0.74 0.86 0.77 0.85 0.92 0.66 0.68 1.00 0.79 0.86 0.82 0.90
9 0.89 0.87 0.98 0.75 0.81 0.79 0.84 0.79 1.00 0.89 0.89 0.73
10 0.83 0.92 0.88 0.80 0.88 0.72 0.75 0.86 0.89 1.00 0.87 0.90
11 0.83 0.82 0.89 0.83 0.87 0.77 0.78 0.82 0.89 0.87 1.00 0.70
12 0.70 0.85 0.74 0.77 0.82 0.64 0.62 0.90 0.73 0.90 0.70 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013