CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Jun-09 08:07:49 UTC
Project Name
SequenceRRLLVRRNIF DLSAPEKDKF FAYLTLAKHT ISSDYVIPIG TYGQMKNGST PMFNDINIYD LFVWMHYYVS MDALLGGSEI WRDIDFAHEA PAFLPWHRLF LLRWEQEIQK LTGDENFTIP YWDWWDAEKC DICTDEYMGG QHPTNPNLLS PASFFSSWQI VCSRLEEYNS HQSLCNGTPE GPLRRNPGNH DKSRTPRLPS SADVEFCLSL TQYESGSMDK AANFSFRNTL EGFASPLTGI ADASQSSMHN ALHIYMNGTM SQVQGSANDP IFLLHHAFVD SIFEQWLRRH RPLQEVYPEA NAPIGHNRES YMVPFIPLYR NGDFFISSKD LGYDYSYLQD SDPDSFQDYI KSYLEQASRI WS
Secondary structure

CCCEEECCCC CCCHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCCCCCCC CCCCCCCHHH HHHHHHHHHH HHCCCCCCCC CCCCCCCCCC CCHHHHHHHH HHHHHHHHHH HCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC HHHHHHHHCC CCCCCCCCCC CCCCCHHHHH HCCCCCCCCC CCCCCCCCHH HHHHHHCHHH HCHHHHCCCC HHHHHHHHHH HHHHHHHHHC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CHHHHCCHHH HCEEECCCCC CCCCCCCCCC CCCCCCCCCC CC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Jun-09 13:14 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density199.4193.9152.1141.1136.6132.3118.7117.482.063.156.832.8
Cluster size288236191176203210161191123976559
Average cluster RMSD1.41.21.31.21.51.61.41.61.51.51.11.8

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 6.61 7.93 6.65 6.26 6.85 5.61 5.74 6.24 6.80 5.17 6.33 5.58
GDT_TS 0.67 0.68 0.65 0.68 0.68 0.68 0.68 0.66 0.68 0.66 0.66 0.68

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 4.15 2.46 4.49 2.30 3.44 2.24 3.57 2.61 3.35 3.91 2.82
2 4.15 0.00 3.17 2.78 3.48 6.06 3.81 3.15 4.77 4.23 3.00 4.55
3 2.46 3.17 0.00 3.46 2.50 4.40 2.02 2.65 3.32 3.00 2.64 3.16
4 4.49 2.78 3.46 0.00 3.90 5.85 3.59 2.72 5.15 3.72 2.60 4.27
5 2.30 3.48 2.50 3.90 0.00 3.92 2.49 3.64 2.39 3.44 3.75 2.96
6 3.44 6.06 4.40 5.85 3.92 0.00 3.53 5.03 2.92 3.60 5.30 2.91
7 2.24 3.81 2.02 3.59 2.49 3.53 0.00 2.82 2.97 2.60 2.93 2.50
8 3.57 3.15 2.65 2.72 3.64 5.03 2.82 0.00 4.61 2.87 2.00 3.71
9 2.61 4.77 3.32 5.15 2.39 2.92 2.97 4.61 0.00 3.75 4.72 2.90
10 3.35 4.23 3.00 3.72 3.44 3.60 2.60 2.87 3.75 0.00 3.06 2.30
11 3.91 3.00 2.64 2.60 3.75 5.30 2.93 2.00 4.72 3.06 0.00 3.86
12 2.82 4.55 3.16 4.27 2.96 2.91 2.50 3.71 2.90 2.30 3.86 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.73 0.76 0.77 0.77 0.71 0.79 0.79 0.72 0.71 0.73 0.73
2 0.73 1.00 0.73 0.78 0.76 0.68 0.73 0.71 0.71 0.70 0.70 0.73
3 0.76 0.73 1.00 0.73 0.74 0.67 0.77 0.74 0.74 0.74 0.76 0.72
4 0.77 0.78 0.73 1.00 0.77 0.70 0.73 0.76 0.71 0.71 0.73 0.73
5 0.77 0.76 0.74 0.77 1.00 0.70 0.73 0.73 0.76 0.73 0.70 0.73
6 0.71 0.68 0.67 0.70 0.70 1.00 0.71 0.70 0.75 0.72 0.72 0.75
7 0.79 0.73 0.77 0.73 0.73 0.71 1.00 0.77 0.75 0.73 0.76 0.74
8 0.79 0.71 0.74 0.76 0.73 0.70 0.77 1.00 0.72 0.74 0.77 0.72
9 0.72 0.71 0.74 0.71 0.76 0.75 0.75 0.72 1.00 0.75 0.72 0.76
10 0.71 0.70 0.74 0.71 0.73 0.72 0.73 0.74 0.75 1.00 0.74 0.78
11 0.73 0.70 0.76 0.73 0.70 0.72 0.76 0.77 0.72 0.74 1.00 0.73
12 0.73 0.73 0.72 0.73 0.73 0.75 0.74 0.72 0.76 0.78 0.73 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013