CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Apr-18 18:32:07 UTC
Project Namecontrol2lk9
SequenceLLLGIGILVL LIIVILGVPL IIFT
Secondary structure

CHHHHHHHHH HHHHHHCHHH HHHC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Apr-18 22:54 UTC
Project Namecontrol2lk9
Clustering data
Cluster #123456789101112
Cluster density381.5269.6261.5159.1154.7137.3132.5112.1111.3105.883.071.6
Cluster size35226322717715317814217891968459
Average cluster RMSD0.91.00.91.11.01.31.11.60.80.91.00.8

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 6.04 4.07 5.40 5.48 4.85 7.55 7.06 6.77 5.32 3.24 4.52 3.61
GDT_TS 0.70 0.75 0.70 0.71 0.72 0.64 0.65 0.66 0.68 0.75 0.73 0.75

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 3.32 0.89 2.15 1.73 2.78 2.47 1.30 1.81 4.47 3.02 3.86
2 3.32 0.00 2.60 2.38 1.92 4.88 4.55 3.86 2.52 2.52 1.77 2.03
3 0.89 2.60 0.00 1.85 1.05 3.20 2.85 1.76 1.41 3.88 2.48 3.32
4 2.15 2.38 1.85 0.00 2.07 3.29 3.38 2.11 2.25 3.45 1.63 3.02
5 1.73 1.92 1.05 2.07 0.00 3.87 3.46 2.59 1.44 3.38 2.17 2.75
6 2.78 4.88 3.20 3.29 3.87 0.00 1.47 2.21 3.72 5.81 4.35 5.24
7 2.47 4.55 2.85 3.38 3.46 1.47 0.00 2.44 3.29 5.48 4.27 4.96
8 1.30 3.86 1.76 2.11 2.59 2.21 2.44 0.00 2.49 4.85 3.30 4.27
9 1.81 2.52 1.41 2.25 1.44 3.72 3.29 2.49 0.00 3.90 2.82 3.42
10 4.47 2.52 3.88 3.45 3.38 5.81 5.48 4.85 3.90 0.00 2.33 2.02
11 3.02 1.77 2.48 1.63 2.17 4.35 4.27 3.30 2.82 2.33 0.00 2.17
12 3.86 2.03 3.32 3.02 2.75 5.24 4.96 4.27 3.42 2.02 2.17 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.79 0.94 0.86 0.86 0.83 0.94 0.91 0.80 0.77 0.82 0.79
2 0.79 1.00 0.84 0.80 0.86 0.71 0.72 0.73 0.78 0.81 0.89 0.86
3 0.94 0.84 1.00 0.89 0.93 0.80 0.85 0.85 0.88 0.80 0.84 0.80
4 0.86 0.80 0.89 1.00 0.84 0.79 0.78 0.86 0.79 0.79 0.86 0.81
5 0.86 0.86 0.93 0.84 1.00 0.74 0.78 0.79 0.86 0.80 0.84 0.83
6 0.83 0.71 0.80 0.79 0.74 1.00 0.88 0.91 0.70 0.70 0.73 0.70
7 0.94 0.72 0.85 0.78 0.78 0.88 1.00 0.85 0.75 0.72 0.75 0.71
8 0.91 0.73 0.85 0.86 0.79 0.91 0.85 1.00 0.76 0.77 0.77 0.74
9 0.80 0.78 0.88 0.79 0.86 0.70 0.75 0.76 1.00 0.75 0.77 0.76
10 0.77 0.81 0.80 0.79 0.80 0.70 0.72 0.77 0.75 1.00 0.84 0.83
11 0.82 0.89 0.84 0.86 0.84 0.73 0.75 0.77 0.77 0.84 1.00 0.84
12 0.79 0.86 0.80 0.81 0.83 0.70 0.71 0.74 0.76 0.83 0.84 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013