CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Nov-19 08:55:02 UTC
Project Name
SequenceQCYHYDQTNR QGQGSHYSQP NRQGQSSHYG QPDTQDQSSH YGQTDRQDQS SHYGQTERQG QSSHYSQMDR QGQGSHYGQT DRQGQSSHYG QPDRQGQNSH YGQTDRQGQS SHYGQTDRQG QSSHYSQPDK QGQSSHYGKI DRQDQSYHYG QPDGQGQSSH YGQTDRQGQS FHYGQPDRQG QSSHYSQMDR QGQSSHYGQT DRQGQSSHYG QTDRQGQSYH YGQTDRQGQS SHYIQSQTGE IQGQNKYFQG TEGTRKASYV EQSGRSGRLS QQTPGQEGYQ NQGQGFQSRD SQQNGHQVWE
Secondary structure

CCCCCCCCCC CCCCCCCCCC CCCCCCCCEE CCCCCCEECC CCCEEEECCC CCCEEEECCC CCCCCCEEEE CCCCCCCCCC CCCEEEEEEC CCCCCEEEEE CCCCEEEEEE CCCCCCCCCE EEEEEECCCC CCCCCCCCCC CCCEEEEECC CCCCCCCEEE EECCCCCCCE EECCCCCCCE EEECCCCEEE ECCCCCCEEE CCCCCCCEEE CCCCCCCCCC CEECCCCCCC EEEECCCCCE EEECCCCEEC CCCCCEEEEE EECCCCEEEE EECCCEEEEE CCCCCCCCCC CCCCCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Nov-19 12:53 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density168.6142.1110.1108.6108.3104.778.878.777.474.168.062.5
Cluster size28923518719018717214012814510513191
Average cluster RMSD1.71.71.71.71.71.61.81.61.91.41.91.5

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 4.54 4.99 4.77 4.78 4.34 4.17 4.30 4.56 4.82 6.18 4.47 4.57
GDT_TS 0.51 0.49 0.47 0.48 0.54 0.53 0.52 0.48 0.46 0.43 0.51 0.48

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 3.13 2.96 2.73 2.54 3.23 3.61 2.90 2.92 4.28 3.40 2.91
2 3.13 0.00 3.45 2.83 3.90 4.23 4.48 2.92 3.67 5.08 3.57 3.38
3 2.96 3.45 0.00 3.16 3.41 4.05 4.18 3.03 2.43 3.50 3.85 3.13
4 2.73 2.83 3.16 0.00 3.13 3.89 3.97 2.87 2.83 4.01 3.31 3.07
5 2.54 3.90 3.41 3.13 0.00 2.94 3.28 2.98 3.28 4.60 3.65 3.02
6 3.23 4.23 4.05 3.89 2.94 0.00 3.24 3.65 3.95 5.41 3.88 3.60
7 3.61 4.48 4.18 3.97 3.28 3.24 0.00 3.61 3.70 5.16 4.22 4.05
8 2.90 2.92 3.03 2.87 2.98 3.65 3.61 0.00 3.11 4.50 3.27 2.83
9 2.92 3.67 2.43 2.83 3.28 3.95 3.70 3.11 0.00 3.54 3.81 3.16
10 4.28 5.08 3.50 4.01 4.60 5.41 5.16 4.50 3.54 0.00 4.82 4.84
11 3.40 3.57 3.85 3.31 3.65 3.88 4.22 3.27 3.81 4.82 0.00 3.90
12 2.91 3.38 3.13 3.07 3.02 3.60 4.05 2.83 3.16 4.84 3.90 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.62 0.63 0.63 0.70 0.65 0.61 0.63 0.63 0.56 0.57 0.61
2 0.62 1.00 0.61 0.65 0.59 0.60 0.55 0.63 0.59 0.55 0.58 0.61
3 0.63 0.61 1.00 0.63 0.60 0.56 0.57 0.60 0.70 0.65 0.53 0.62
4 0.63 0.65 0.63 1.00 0.63 0.60 0.56 0.62 0.63 0.55 0.57 0.64
5 0.70 0.59 0.60 0.63 1.00 0.65 0.62 0.64 0.62 0.56 0.56 0.60
6 0.65 0.60 0.56 0.60 0.65 1.00 0.59 0.57 0.56 0.53 0.57 0.57
7 0.61 0.55 0.57 0.56 0.62 0.59 1.00 0.60 0.57 0.55 0.55 0.56
8 0.63 0.63 0.60 0.62 0.64 0.57 0.60 1.00 0.63 0.55 0.58 0.66
9 0.63 0.59 0.70 0.63 0.62 0.56 0.57 0.63 1.00 0.62 0.54 0.63
10 0.56 0.55 0.65 0.55 0.56 0.53 0.55 0.55 0.62 1.00 0.49 0.55
11 0.57 0.58 0.53 0.57 0.56 0.57 0.55 0.58 0.54 0.49 1.00 0.53
12 0.61 0.61 0.62 0.64 0.60 0.57 0.56 0.66 0.63 0.55 0.53 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013