CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Aug-06 05:16:52 UTC
Project Name
SequenceRGDEAAAKYP HLENDSYAAY GVKNNLIGKA AYIASVLTVL FAAYSLSIDV TSLKKSIIYG IAPPPQFKKK NKLRMMLSSK GIDKKGMAYF PYIASVLTKK YKKKYFALRM RMKQNWYAFT SSMKQGNTGG GGSNPFKGLS TDRKMDEVSG GGGSLSSKGI DQKMRVLGGG GSKFGSAIRN RNGGGGSTTR EIEQVELLKG GGGSIPTMKI ALKGGGGSKC KNCKYKKKYF ALGGGGSASN DPLTSFSIRS NAVKTNA
Secondary structure

CCCCCCCCCC CCCHHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCCCCCCCCC CCCCHHHHHH HHHHHHHCCC CCCCHHHHHH HHHHHHHCCC CCCHHHHHHH HHHHHHHHHH HHHCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCHHHH HHHHHHCCCC CCCCCCCCCC CCCCCCCCCC CEEEEEEEEE CCCCCCEEEE EEEECCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Aug-06 10:09 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density96.086.278.773.272.571.468.365.961.059.343.628.0
Cluster size24921520315918915820315813716210166
Average cluster RMSD2.62.52.62.22.62.23.02.42.22.72.32.4

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 11.60 17.20 16.10 14.90 15.70 12.70 12.10 17.90 17.50 11.70 13.40 11.40
GDT_TS 0.30 0.23 0.26 0.30 0.28 0.29 0.30 0.26 0.24 0.29 0.31 0.36

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 12.40 11.60 9.93 11.90 6.96 7.42 13.40 11.10 4.82 9.03 4.85
2 12.40 0.00 4.51 5.57 4.69 9.22 11.20 5.20 8.69 11.60 7.90 12.40
3 11.60 4.51 0.00 4.61 4.60 8.23 10.10 4.87 7.42 10.60 7.01 11.30
4 9.93 5.57 4.61 0.00 5.02 5.99 7.77 5.54 7.17 9.44 4.12 9.73
5 11.90 4.69 4.60 5.02 0.00 8.44 10.20 5.88 8.43 11.10 7.04 12.00
6 6.96 9.22 8.23 5.99 8.44 0.00 4.52 9.97 9.65 7.30 4.32 7.35
7 7.42 11.20 10.10 7.77 10.20 4.52 0.00 11.60 11.60 8.06 5.95 7.91
8 13.40 5.20 4.87 5.54 5.88 9.97 11.60 0.00 8.07 13.10 8.05 13.20
9 11.10 8.69 7.42 7.17 8.43 9.65 11.60 8.07 0.00 10.40 9.29 11.00
10 4.82 11.60 10.60 9.44 11.10 7.30 8.06 13.10 10.40 0.00 9.17 5.32
11 9.03 7.90 7.01 4.12 7.04 4.32 5.95 8.05 9.29 9.17 0.00 8.76
12 4.85 12.40 11.30 9.73 12.00 7.35 7.91 13.20 11.00 5.32 8.76 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.31 0.35 0.41 0.34 0.43 0.43 0.35 0.35 0.48 0.42 0.47
2 0.31 1.00 0.57 0.47 0.55 0.34 0.37 0.51 0.45 0.36 0.39 0.29
3 0.35 0.57 1.00 0.48 0.53 0.35 0.37 0.55 0.40 0.39 0.40 0.33
4 0.41 0.47 0.48 1.00 0.46 0.48 0.49 0.53 0.43 0.44 0.60 0.39
5 0.34 0.55 0.53 0.46 1.00 0.35 0.37 0.47 0.40 0.35 0.41 0.32
6 0.43 0.34 0.35 0.48 0.35 1.00 0.52 0.35 0.39 0.43 0.55 0.39
7 0.43 0.37 0.37 0.49 0.37 0.52 1.00 0.40 0.36 0.45 0.47 0.40
8 0.35 0.51 0.55 0.53 0.47 0.35 0.40 1.00 0.39 0.41 0.41 0.31
9 0.35 0.45 0.40 0.43 0.40 0.39 0.36 0.39 1.00 0.40 0.38 0.29
10 0.48 0.36 0.39 0.44 0.35 0.43 0.45 0.41 0.40 1.00 0.40 0.43
11 0.42 0.39 0.40 0.60 0.41 0.55 0.47 0.41 0.38 0.40 1.00 0.40
12 0.47 0.29 0.33 0.39 0.32 0.39 0.40 0.31 0.29 0.43 0.40 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013