CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Jun-08 08:20:19 UTC
Project Name
SequenceQPQKCQREFQ QEQHLRACQQ WIRQQLAGSP F
Secondary structure

CCHHHHHHHH HHCCCCCCHH HHHHCCCCCC C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Jun-08 12:43 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density187.9144.7144.7135.2103.386.285.076.171.062.135.221.0
Cluster size3192602482191811591491281291066636
Average cluster RMSD1.71.81.71.61.81.81.81.71.81.71.91.7

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 3.35 4.09 3.83 3.40 4.65 4.90 3.40 3.85 3.57 3.26 5.32 4.15
GDT_TS 0.64 0.61 0.60 0.61 0.60 0.60 0.63 0.59 0.62 0.65 0.58 0.61

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.87 1.64 1.28 2.26 2.92 1.50 1.78 1.67 1.70 3.30 4.07
2 1.87 0.00 1.68 1.90 1.31 2.33 1.91 1.97 2.33 2.41 2.47 4.67
3 1.64 1.68 0.00 1.88 2.14 2.26 1.43 2.14 1.41 2.46 3.47 3.84
4 1.28 1.90 1.88 0.00 2.53 3.33 1.00 1.63 1.77 1.59 3.58 4.42
5 2.26 1.31 2.14 2.53 0.00 1.89 2.62 2.45 2.53 3.06 2.00 4.67
6 2.92 2.33 2.26 3.33 1.89 0.00 3.18 3.63 2.58 4.01 3.25 3.75
7 1.50 1.91 1.43 1.00 2.62 3.18 0.00 1.72 1.77 1.64 3.63 4.38
8 1.78 1.97 2.14 1.63 2.45 3.63 1.72 0.00 2.69 1.61 2.81 5.17
9 1.67 2.33 1.41 1.77 2.53 2.58 1.77 2.69 0.00 2.70 4.05 3.22
10 1.70 2.41 2.46 1.59 3.06 4.01 1.64 1.61 2.70 0.00 3.60 5.02
11 3.30 2.47 3.47 3.58 2.00 3.25 3.63 2.81 4.05 3.60 0.00 5.93
12 4.07 4.67 3.84 4.42 4.67 3.75 4.38 5.17 3.22 5.02 5.93 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.90 0.91 0.91 0.88 0.84 0.88 0.85 0.85 0.90 0.75 0.65
2 0.90 1.00 0.85 0.90 0.94 0.81 0.88 0.85 0.79 0.92 0.82 0.61
3 0.91 0.85 1.00 0.91 0.89 0.90 0.92 0.83 0.90 0.90 0.79 0.65
4 0.91 0.90 0.91 1.00 0.90 0.87 0.95 0.83 0.86 0.90 0.76 0.63
5 0.88 0.94 0.89 0.90 1.00 0.84 0.89 0.91 0.80 0.93 0.85 0.60
6 0.84 0.81 0.90 0.87 0.84 1.00 0.89 0.75 0.88 0.81 0.75 0.64
7 0.88 0.88 0.92 0.95 0.89 0.89 1.00 0.85 0.85 0.90 0.77 0.62
8 0.85 0.85 0.83 0.83 0.91 0.75 0.85 1.00 0.77 0.89 0.90 0.60
9 0.85 0.79 0.90 0.86 0.80 0.88 0.85 0.77 1.00 0.81 0.69 0.68
10 0.90 0.92 0.90 0.90 0.93 0.81 0.90 0.89 0.81 1.00 0.82 0.62
11 0.75 0.82 0.79 0.76 0.85 0.75 0.77 0.90 0.69 0.82 1.00 0.57
12 0.65 0.61 0.65 0.63 0.60 0.64 0.62 0.60 0.68 0.62 0.57 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013